Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc7l16
         (633 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X17558-1|CAA35591.1| 1299|Drosophila melanogaster patched protei...    31   0.98 
M28999-1|AAA28696.1| 1286|Drosophila melanogaster patched protein.     31   0.98 
AE013599-680|AAF59062.1| 1286|Drosophila melanogaster CG2411-PA ...    31   0.98 

>X17558-1|CAA35591.1| 1299|Drosophila melanogaster patched protein
           protein.
          Length = 1299

 Score = 31.5 bits (68), Expect = 0.98
 Identities = 12/16 (75%), Positives = 15/16 (93%)
 Frame = +3

Query: 582 ADLYIRTSWIDAALAL 629
           +DLYIRTSW+DA +AL
Sbjct: 23  SDLYIRTSWVDAQVAL 38


>M28999-1|AAA28696.1| 1286|Drosophila melanogaster patched protein.
          Length = 1286

 Score = 31.5 bits (68), Expect = 0.98
 Identities = 12/16 (75%), Positives = 15/16 (93%)
 Frame = +3

Query: 582 ADLYIRTSWIDAALAL 629
           +DLYIRTSW+DA +AL
Sbjct: 23  SDLYIRTSWVDAQVAL 38


>AE013599-680|AAF59062.1| 1286|Drosophila melanogaster CG2411-PA
           protein.
          Length = 1286

 Score = 31.5 bits (68), Expect = 0.98
 Identities = 12/16 (75%), Positives = 15/16 (93%)
 Frame = +3

Query: 582 ADLYIRTSWIDAALAL 629
           +DLYIRTSW+DA +AL
Sbjct: 23  SDLYIRTSWVDAQVAL 38


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,666,692
Number of Sequences: 53049
Number of extensions: 498311
Number of successful extensions: 1291
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1244
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1291
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2641708800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)