Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc7l15
(401 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P11042 Cluster: Early 39 kDa protein; n=5; Nucleopolyhe... 124 9e-28
UniRef50_P21288 Cluster: Late expression factor 11; n=6; Nucleop... 116 1e-25
UniRef50_Q91GM8 Cluster: Late expression factor 11; n=5; Nucleop... 62 3e-09
UniRef50_Q7TLW3 Cluster: Late expression factor 11; n=1; Chorist... 62 5e-09
UniRef50_Q05121 Cluster: Early 39 kDa protein; n=7; Nucleopolyhe... 59 3e-08
UniRef50_Q91BX9 Cluster: 39K Protein; n=4; Nucleopolyhedrovirus|... 53 2e-06
UniRef50_Q80LT3 Cluster: 39K protein; n=1; Adoxophyes honmai NPV... 41 0.011
UniRef50_A2DYN8 Cluster: Putative uncharacterized protein; n=1; ... 41 0.011
UniRef50_Q9IK80 Cluster: 39k protein; n=1; Spodoptera litura NPV... 38 0.074
UniRef50_O55584 Cluster: 39K; n=2; Leucania separata nuclear pol... 37 0.17
UniRef50_Q8RHJ6 Cluster: ABC1 family protein; n=2; Fusobacterium... 36 0.30
UniRef50_Q244Z8 Cluster: Putative uncharacterized protein; n=1; ... 36 0.30
UniRef50_A0EYS7 Cluster: 39K; n=1; Ecotropis obliqua NPV|Rep: 39... 34 0.91
UniRef50_Q22CS5 Cluster: Putative uncharacterized protein; n=1; ... 34 1.2
UniRef50_Q2M0C7 Cluster: GA16693-PA; n=1; Drosophila pseudoobscu... 33 1.6
UniRef50_O63897 Cluster: RNA-dependent RNA polymerase; n=1; Bryo... 33 2.1
UniRef50_Q91SH3 Cluster: GP34; n=1; Guinea pig cytomegalovirus|R... 33 2.8
UniRef50_Q83Z92 Cluster: Recombinase Sin; n=2; Enterococcus faec... 33 2.8
UniRef50_Q4MZV6 Cluster: Putative uncharacterized protein; n=1; ... 33 2.8
UniRef50_Q225D8 Cluster: Putative uncharacterized protein; n=1; ... 33 2.8
UniRef50_Q24I61 Cluster: Putative uncharacterized protein; n=1; ... 32 3.7
UniRef50_Q170N7 Cluster: Putative uncharacterized protein; n=2; ... 32 3.7
UniRef50_A0CM98 Cluster: Chromosome undetermined scaffold_21, wh... 32 3.7
UniRef50_A7SFX1 Cluster: Predicted protein; n=1; Nematostella ve... 32 4.9
UniRef50_A0DTF8 Cluster: Chromosome undetermined scaffold_63, wh... 32 4.9
UniRef50_Q0N475 Cluster: 39K/PP31; n=1; Clanis bilineata nucleop... 31 6.4
UniRef50_Q8IKD8 Cluster: Putative uncharacterized protein; n=1; ... 31 6.4
UniRef50_Q23QJ1 Cluster: Putative uncharacterized protein; n=1; ... 31 6.4
UniRef50_Q22MP8 Cluster: Putative uncharacterized protein; n=1; ... 31 6.4
UniRef50_UPI000150A96F Cluster: hypothetical protein TTHERM_0047... 31 8.5
UniRef50_Q9J817 Cluster: ORF120 39K / pp31; n=3; Nucleopolyhedro... 31 8.5
UniRef50_Q57S11 Cluster: Putative uncharacterized protein; n=1; ... 31 8.5
UniRef50_Q54T72 Cluster: Putative uncharacterized protein; n=1; ... 31 8.5
UniRef50_O14802 Cluster: DNA-directed RNA polymerase III subunit... 31 8.5
>UniRef50_P11042 Cluster: Early 39 kDa protein; n=5;
Nucleopolyhedrovirus|Rep: Early 39 kDa protein -
Autographa californica nuclear polyhedrosis virus
(AcMNPV)
Length = 275
Score = 124 bits (298), Expect = 9e-28
Identities = 61/68 (89%), Positives = 64/68 (94%)
Frame = +2
Query: 158 MVNMPEQQSSTETAAVCKNEKLLNKLESSSYNKSNMDQLIAIVNFLEKKNINYILNVMPV 337
MVN+PEQQS ETAAVCKNEKLLNKLESSSYNKSNMDQL IVNFLE+KNINYILNV+PV
Sbjct: 1 MVNVPEQQSP-ETAAVCKNEKLLNKLESSSYNKSNMDQLAVIVNFLERKNINYILNVVPV 59
Query: 338 MQDERKMS 361
MQDERKMS
Sbjct: 60 MQDERKMS 67
>UniRef50_P21288 Cluster: Late expression factor 11; n=6;
Nucleopolyhedrovirus|Rep: Late expression factor 11 -
Autographa californica nuclear polyhedrosis virus
(AcMNPV)
Length = 112
Score = 116 bits (280), Expect = 1e-25
Identities = 52/53 (98%), Positives = 52/53 (98%)
Frame = +3
Query: 3 RANLGHFTVITDKCSKRKVCLHHKRIARLLGIKKIYHQEYKRVVSKVYKNQTW 161
RANLGHFTVITDKCSKRKVCLHHKRIARLLGIKKIYHQEYKRVVSKVYK QTW
Sbjct: 60 RANLGHFTVITDKCSKRKVCLHHKRIARLLGIKKIYHQEYKRVVSKVYKKQTW 112
>UniRef50_Q91GM8 Cluster: Late expression factor 11; n=5;
Nucleopolyhedrovirus|Rep: Late expression factor 11 -
Epiphyas postvittana nucleopolyhedrovirus (EppoMNPV)
Length = 126
Score = 62.5 bits (145), Expect = 3e-09
Identities = 31/53 (58%), Positives = 34/53 (64%)
Frame = +3
Query: 3 RANLGHFTVITDKCSKRKVCLHHKRIARLLGIKKIYHQEYKRVVSKVYKNQTW 161
RANL FTVIT KCSKRKVC H KRIAR L ++K EY V+ VY W
Sbjct: 74 RANLSRFTVITGKCSKRKVCHHDKRIARTLHLEKNLVDEYACSVTHVYSAPKW 126
>UniRef50_Q7TLW3 Cluster: Late expression factor 11; n=1;
Choristoneura fumiferana MNPV|Rep: Late expression
factor 11 - Choristoneura fumiferana nuclear
polyhedrosis virus (CfMNPV)
Length = 107
Score = 61.7 bits (143), Expect = 5e-09
Identities = 29/53 (54%), Positives = 34/53 (64%)
Frame = +3
Query: 3 RANLGHFTVITDKCSKRKVCLHHKRIARLLGIKKIYHQEYKRVVSKVYKNQTW 161
RANL FTVIT KCSKRKVC HH+RI R L + EY V+ VY++ W
Sbjct: 55 RANLSRFTVITGKCSKRKVCNHHRRIKRTLELNLNLVNEYACSVTDVYRSPKW 107
>UniRef50_Q05121 Cluster: Early 39 kDa protein; n=7;
Nucleopolyhedrovirus|Rep: Early 39 kDa protein - Orgyia
pseudotsugata multicapsid polyhedrosis virus (OpMNPV)
Length = 261
Score = 59.3 bits (137), Expect = 3e-08
Identities = 28/68 (41%), Positives = 43/68 (63%)
Frame = +2
Query: 158 MVNMPEQQSSTETAAVCKNEKLLNKLESSSYNKSNMDQLIAIVNFLEKKNINYILNVMPV 337
MVN+P+ E + N L+++LE+S++NKSN + L +NF EKK++NY + +P
Sbjct: 1 MVNLPDNVH--EESFANNNASLISRLENSAFNKSNFEYLKTCINFFEKKSVNYTVVALPC 58
Query: 338 MQDERKMS 361
DERK S
Sbjct: 59 SGDERKAS 66
>UniRef50_Q91BX9 Cluster: 39K Protein; n=4;
Nucleopolyhedrovirus|Rep: 39K Protein - Helicoverpa
armigera NPV
Length = 312
Score = 53.2 bits (122), Expect = 2e-06
Identities = 21/49 (42%), Positives = 37/49 (75%)
Frame = +2
Query: 215 EKLLNKLESSSYNKSNMDQLIAIVNFLEKKNINYILNVMPVMQDERKMS 361
E L+ KLE+S YNK++++ L+ ++N EK+ I Y ++VMP + D++K+S
Sbjct: 7 ESLIIKLENSVYNKTHIETLVNVINLFEKQKIGYQVHVMPTIADDKKLS 55
>UniRef50_Q80LT3 Cluster: 39K protein; n=1; Adoxophyes honmai
NPV|Rep: 39K protein - Adoxophyes honmai
nucleopolyhedrovirus
Length = 261
Score = 40.7 bits (91), Expect = 0.011
Identities = 20/48 (41%), Positives = 30/48 (62%)
Frame = +2
Query: 212 NEKLLNKLESSSYNKSNMDQLIAIVNFLEKKNINYILNVMPVMQDERK 355
NE LL K E+S +NK+ D L+ +N EKK + Y+L P+ D++K
Sbjct: 7 NEILL-KYENSGHNKTRNDILMQSINMYEKKKVPYVLLTSPLYTDDKK 53
>UniRef50_A2DYN8 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 391
Score = 40.7 bits (91), Expect = 0.011
Identities = 28/81 (34%), Positives = 45/81 (55%), Gaps = 5/81 (6%)
Frame = +2
Query: 101 KNISSRIQAGRFKGLQK-SNMVNMPEQQSSTETAAVCKNEKLLNKLESS--SYNKSNMDQ 271
+NIS+ R+K L K N+P ++ ET + KN KLL K ES+ Y+K+ M++
Sbjct: 255 RNISN--SENRYKVLSKLPKNNNLPNEEIEMETDQLIKNLKLLQKRESNRIKYSKAEMEE 312
Query: 272 LIAIVNFLEKK--NINYILNV 328
L ++ EKK + Y L++
Sbjct: 313 LTELIQKSEKKVEQLKYSLSI 333
>UniRef50_Q9IK80 Cluster: 39k protein; n=1; Spodoptera litura
NPV|Rep: 39k protein - Spodoptera litura multicapsid
nucleopolyhedrovirus (SpltMNPV)
Length = 322
Score = 37.9 bits (84), Expect = 0.074
Identities = 18/64 (28%), Positives = 33/64 (51%)
Frame = +2
Query: 164 NMPEQQSSTETAAVCKNEKLLNKLESSSYNKSNMDQLIAIVNFLEKKNINYILNVMPVMQ 343
N Q T ++ K + ++N++E+ +NK+NM L + EK + Y + V +
Sbjct: 18 NNAVQSPPPPTGSIEKQQDIVNRIENGQFNKTNMQFLKHALVMCEKMKVPYYIGVTALPC 77
Query: 344 DERK 355
DE+K
Sbjct: 78 DEKK 81
>UniRef50_O55584 Cluster: 39K; n=2; Leucania separata nuclear
polyhedrosis virus|Rep: 39K - Leucania separata nuclear
polyhedrosis virus (LsNPV)
Length = 324
Score = 36.7 bits (81), Expect = 0.17
Identities = 16/45 (35%), Positives = 28/45 (62%)
Frame = +2
Query: 221 LLNKLESSSYNKSNMDQLIAIVNFLEKKNINYILNVMPVMQDERK 355
L+ LE+S++NK+NM ++ EK I Y ++ P+ QD++K
Sbjct: 8 LMGLLENSAHNKTNMAHFKQLLIMFEKSKIPYHASINPMPQDDKK 52
>UniRef50_Q8RHJ6 Cluster: ABC1 family protein; n=2; Fusobacterium
nucleatum|Rep: ABC1 family protein - Fusobacterium
nucleatum subsp. nucleatum
Length = 176
Score = 35.9 bits (79), Expect = 0.30
Identities = 18/62 (29%), Positives = 34/62 (54%)
Frame = +2
Query: 173 EQQSSTETAAVCKNEKLLNKLESSSYNKSNMDQLIAIVNFLEKKNINYILNVMPVMQDER 352
EQ+ + VCK+ L KL + K + L++++N + K N NY LN++ M++
Sbjct: 39 EQKKQSRAVYVCKSLNCLGKLAKHNKVKLDSQDLMSMLNIINKANKNY-LNILNSMKNSG 97
Query: 353 KM 358
++
Sbjct: 98 EL 99
>UniRef50_Q244Z8 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 1496
Score = 35.9 bits (79), Expect = 0.30
Identities = 20/66 (30%), Positives = 28/66 (42%)
Frame = +2
Query: 146 QKSNMVNMPEQQSSTETAAVCKNEKLLNKLESSSYNKSNMDQLIAIVNFLEKKNINYILN 325
QK N+ + P + + N L++ S K DQL NF K NYI
Sbjct: 652 QKINITSTPINLQTIDLRTDLNNHSPATSLQNESTKKGQTDQLHQFQNFANIKTTNYINQ 711
Query: 326 VMPVMQ 343
V+P+ Q
Sbjct: 712 VIPLEQ 717
>UniRef50_A0EYS7 Cluster: 39K; n=1; Ecotropis obliqua NPV|Rep: 39K -
Ecotropis obliqua NPV
Length = 293
Score = 34.3 bits (75), Expect = 0.91
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = +2
Query: 224 LNKLESSSYNKSNMDQLIAIVNFLEKKNINYILNVMPVMQDERKM 358
L+K E+S YNKS+ + +A + EKK + Y + V + +RK+
Sbjct: 12 LSKYENSVYNKSDNEINVAKIKLFEKKKMTYNITVNEIHNYDRKI 56
>UniRef50_Q22CS5 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 865
Score = 33.9 bits (74), Expect = 1.2
Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
Frame = +2
Query: 101 KNISSRIQAGRFKGLQKSNMVNMPEQQSSTETAAVC---KNEKLLNKLESSSYNKSNMDQ 271
KNI + Q + Q+ + +QS T+ + C +N+KL ++E +SYNK + ++
Sbjct: 396 KNIQNTHQIYNLQIPQQDQSLLQIRRQSYTQDPSQCLHQQNQKLSKEIEETSYNKLDNNE 455
Query: 272 LIAIVNFLEK-KNINYILNVMPVMQ 343
I + NY+ +V P MQ
Sbjct: 456 CQNITTDANQLGQRNYVFDVSPQMQ 480
>UniRef50_Q2M0C7 Cluster: GA16693-PA; n=1; Drosophila
pseudoobscura|Rep: GA16693-PA - Drosophila pseudoobscura
(Fruit fly)
Length = 446
Score = 33.5 bits (73), Expect = 1.6
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Frame = +2
Query: 128 GRFKGLQKSNMVNMPEQQSSTETAAVCKNEKLLNKLESSSYNKSNMDQLIAIVNFLEK-K 304
GRF + K + + + + + CKN + L+ LE +SY S+ +L IV K K
Sbjct: 166 GRFHNISK---LCLTARFAMFDLVEFCKNNQSLSSLELNSYLYSDYGKLTYIVEHCPKLK 222
Query: 305 NINYILNVMPVMQDE 349
+ ++LN +++DE
Sbjct: 223 ELKFVLNNNGLIRDE 237
>UniRef50_O63897 Cluster: RNA-dependent RNA polymerase; n=1;
Bryopsis cinicola|Rep: RNA-dependent RNA polymerase -
Bryopsis cinicola
Length = 824
Score = 33.1 bits (72), Expect = 2.1
Identities = 18/40 (45%), Positives = 22/40 (55%)
Frame = +3
Query: 6 ANLGHFTVITDKCSKRKVCLHHKRIARLLGIKKIYHQEYK 125
AN GH+T + KR C+H IA+ L KKI Q YK
Sbjct: 236 ANSGHYTSLLFGSKKRDSCVHSNLIAKEL-FKKITKQPYK 274
>UniRef50_Q91SH3 Cluster: GP34; n=1; Guinea pig cytomegalovirus|Rep:
GP34 - Guinea pig cytomegalovirus
Length = 527
Score = 32.7 bits (71), Expect = 2.8
Identities = 20/52 (38%), Positives = 32/52 (61%)
Frame = +2
Query: 152 SNMVNMPEQQSSTETAAVCKNEKLLNKLESSSYNKSNMDQLIAIVNFLEKKN 307
SN + P++Q ST T+A K +K NK +S ++ D+L+A +FLE+ N
Sbjct: 336 SNATDKPKRQPSTVTSAK-KTKKAQNKASAS---RAANDELVAASSFLEQDN 383
>UniRef50_Q83Z92 Cluster: Recombinase Sin; n=2; Enterococcus
faecalis|Rep: Recombinase Sin - Enterococcus faecalis
(Streptococcus faecalis)
Length = 228
Score = 32.7 bits (71), Expect = 2.8
Identities = 21/94 (22%), Positives = 46/94 (48%), Gaps = 5/94 (5%)
Frame = +2
Query: 80 CQAVGH*KNISSRIQAGRFKG-----LQKSNMVNMPEQQSSTETAAVCKNEKLLNKLESS 244
C++ H +N+ +IQ + G ++K + ++ ++ TE + + +E+
Sbjct: 28 CKSFIHWQNLERQIQELKKLGAKKIFVEKKSGASIEQRLIFTEAIYFVRESDIF-MVEAI 86
Query: 245 SYNKSNMDQLIAIVNFLEKKNINYILNVMPVMQD 346
N D++I VN L+ KN+ I+ +P+M +
Sbjct: 87 DRLGRNYDEIIQTVNLLKNKNVRLIITSLPIMAE 120
>UniRef50_Q4MZV6 Cluster: Putative uncharacterized protein; n=1;
Theileria parva|Rep: Putative uncharacterized protein -
Theileria parva
Length = 1148
Score = 32.7 bits (71), Expect = 2.8
Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 3/79 (3%)
Frame = +2
Query: 101 KNISSRIQAGRFKGLQKSNMVNMPEQQSSTETAAVCKNEKLLNKL---ESSSYNKSNMDQ 271
KN+ +F L N + E E +N K L E+ S+N+SN++
Sbjct: 195 KNLKFSTNILKFNQLFNQNNLKFNENLKFNENLKFNENSKFSENLKFNENLSFNQSNLNF 254
Query: 272 LIAIVNFLEKKNINYILNV 328
+ +NF E N N ILN+
Sbjct: 255 NQSNLNFNESLNFNNILNL 273
>UniRef50_Q225D8 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 152
Score = 32.7 bits (71), Expect = 2.8
Identities = 13/43 (30%), Positives = 32/43 (74%)
Frame = +2
Query: 209 KNEKLLNKLESSSYNKSNMDQLIAIVNFLEKKNINYILNVMPV 337
KN+++LNKL++ + NKS + L++ + L+++ IN++ +++ +
Sbjct: 69 KNKQILNKLQTQNSNKSEV--LLSYIIILDEQEINFLKDLLVI 109
>UniRef50_Q24I61 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 747
Score = 32.3 bits (70), Expect = 3.7
Identities = 20/87 (22%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Frame = +2
Query: 59 VSSSQTNCQAVGH*KNISSRIQAGRFKG-LQKSNMVNMPEQQSSTETAAVCKNEKLLNKL 235
+ + Q A + N S + +++ Q+ N +N +++S E A + E ++
Sbjct: 285 IQNQQNYTNANVYTNNYSYEYDSNKYQNSFQEGNQLNNLQKESQQENQASNQYENHEIEI 344
Query: 236 ESSSYNKSNMDQLIAIVNFLEKKNINY 316
E + N SN ++ NFL+ ++ NY
Sbjct: 345 EQINDNSSNENKQQKATNFLQNQSFNY 371
>UniRef50_Q170N7 Cluster: Putative uncharacterized protein; n=2;
cellular organisms|Rep: Putative uncharacterized protein
- Aedes aegypti (Yellowfever mosquito)
Length = 1379
Score = 32.3 bits (70), Expect = 3.7
Identities = 23/71 (32%), Positives = 37/71 (52%)
Frame = +2
Query: 65 SSQTNCQAVGH*KNISSRIQAGRFKGLQKSNMVNMPEQQSSTETAAVCKNEKLLNKLESS 244
+ Q +C + K+ S I A SN N PE+++S E +A KL+N+L +
Sbjct: 7 AEQPSCSSSTSQKSSSETITAATTSASGSSNPPN-PERRASIERSAEQVTRKLINQL--T 63
Query: 245 SYNKSNMDQLI 277
S NK ++ Q+I
Sbjct: 64 SMNKHSLKQVI 74
>UniRef50_A0CM98 Cluster: Chromosome undetermined scaffold_21, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_21,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 493
Score = 32.3 bits (70), Expect = 3.7
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +2
Query: 212 NEKLLNKLESSSYNKSNMDQLIAIVNFLEKKNI 310
N+ L+N+L S Y K Q++AI L+KKN+
Sbjct: 105 NQDLMNQLTKSGYQKPTPIQMVAIPIILQKKNL 137
>UniRef50_A7SFX1 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 218
Score = 31.9 bits (69), Expect = 4.9
Identities = 19/78 (24%), Positives = 36/78 (46%)
Frame = -2
Query: 391 IVVNHLLLAFGHFAFVLHDRHYVEDIVNVLFFQEIYNSN*LVHVGFVVRARFQFIQQLFI 212
++ N L ++FV+ +HYV++ V LF E+ S + + + + +F+
Sbjct: 51 VLYNLLCSVLSLYSFVIIAKHYVQNGVESLFRMEVNQSIKQALLVYWATKNIELLDTVFM 110
Query: 211 FAHGRSFCRRLLLRHVYH 158
R R++ HVYH
Sbjct: 111 ILRHRQ--RQISFLHVYH 126
>UniRef50_A0DTF8 Cluster: Chromosome undetermined scaffold_63, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_63,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 556
Score = 31.9 bits (69), Expect = 4.9
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +2
Query: 176 QQSSTETAAVCKNEKLLNKLESSSYNKSNMDQLI 277
QQS+T +AV K K + +E S+YN N Q+I
Sbjct: 375 QQSTTPMSAVEKRNKKGDSIEGSNYNSENKQQII 408
>UniRef50_Q0N475 Cluster: 39K/PP31; n=1; Clanis bilineata
nucleopolyhedrosis virus|Rep: 39K/PP31 - Clanis
bilineata nucleopolyhedrosis virus
Length = 281
Score = 31.5 bits (68), Expect = 6.4
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +2
Query: 218 KLLNKLESSSYNKSNMDQLIAIVNFLEKKNINYILNVMPVMQDERK 355
+L+ K + S NK++ D + A + EKK + Y V V ++K
Sbjct: 10 ELMTKYQDSGNNKTDFDIIAAKIKLFEKKKVAYRFKVSEVFNMDKK 55
>UniRef50_Q8IKD8 Cluster: Putative uncharacterized protein; n=1;
Plasmodium falciparum 3D7|Rep: Putative uncharacterized
protein - Plasmodium falciparum (isolate 3D7)
Length = 398
Score = 31.5 bits (68), Expect = 6.4
Identities = 27/79 (34%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Frame = +2
Query: 77 NCQAVGH*KNISSR-IQAGRFKGLQKSNMVNMPEQQSSTETAAVCKNEKLLNKLESSSYN 253
N Q K I+ + I+ G K N +NM + ST VC + N SS N
Sbjct: 315 NSQIYNINKKINKKGIKNGNMNKSDKMNKINMNGKNISTNQKNVCNSRSTSN----SSSN 370
Query: 254 KSNMDQLIAIVNFLEKKNI 310
S+M Q IV+F K NI
Sbjct: 371 SSDMSQ-EEIVSFSSKYNI 388
>UniRef50_Q23QJ1 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 1515
Score = 31.5 bits (68), Expect = 6.4
Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
Frame = +2
Query: 134 FKGLQKSNMVNMPEQQSSTETAAVCKNEKLLNKL----ESSSYNKSNMDQLIAIVNFLEK 301
F +Q S+M+N P SS ++ ++ K LN+L E+SSYN ++ ++ +N+
Sbjct: 544 FLVIQNSDMIN-PALNSSLMSSKKQQSMKKLNRLKSTKETSSYNFIYVEFILKRLNYKGV 602
Query: 302 KNINYI 319
N++YI
Sbjct: 603 NNVSYI 608
>UniRef50_Q22MP8 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 763
Score = 31.5 bits (68), Expect = 6.4
Identities = 16/62 (25%), Positives = 32/62 (51%)
Frame = +2
Query: 134 FKGLQKSNMVNMPEQQSSTETAAVCKNEKLLNKLESSSYNKSNMDQLIAIVNFLEKKNIN 313
+K +QKS EQQ +++ K + L NK + S++++ I+ ++ +N+N
Sbjct: 252 YKNVQKSKFQETGEQQQQGNSSSDTKRKSLNNKFDWKKRLVSDINEQISQTECIQNENLN 311
Query: 314 YI 319
I
Sbjct: 312 KI 313
>UniRef50_UPI000150A96F Cluster: hypothetical protein
TTHERM_00472000; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00472000 - Tetrahymena
thermophila SB210
Length = 591
Score = 31.1 bits (67), Expect = 8.5
Identities = 21/72 (29%), Positives = 33/72 (45%)
Frame = +2
Query: 146 QKSNMVNMPEQQSSTETAAVCKNEKLLNKLESSSYNKSNMDQLIAIVNFLEKKNINYILN 325
QKS+ +N EQ E V +NEK+LN+LE N DQ ++ +N + N
Sbjct: 472 QKSS-INQHEQ----EEEEVSQNEKILNQLEQIEQNTQQSDQQYELLENNSNQNYSISTN 526
Query: 326 VMPVMQDERKMS 361
+ + + S
Sbjct: 527 EQALSESNKNQS 538
>UniRef50_Q9J817 Cluster: ORF120 39K / pp31; n=3;
Nucleopolyhedrovirus|Rep: ORF120 39K / pp31 - Spodoptera
exigua MNPV
Length = 317
Score = 31.1 bits (67), Expect = 8.5
Identities = 12/33 (36%), Positives = 23/33 (69%)
Frame = +2
Query: 251 NKSNMDQLIAIVNFLEKKNINYILNVMPVMQDE 349
+K++M+ + A++N LEKK I Y + MP+ ++
Sbjct: 26 DKAHMEHVTAVINTLEKKKIKYKIIPMPMCGED 58
>UniRef50_Q57S11 Cluster: Putative uncharacterized protein; n=1;
Salmonella choleraesuis|Rep: Putative uncharacterized
protein - Salmonella choleraesuis
Length = 528
Score = 31.1 bits (67), Expect = 8.5
Identities = 23/63 (36%), Positives = 30/63 (47%), Gaps = 6/63 (9%)
Frame = +2
Query: 149 KSNMVNMPEQQSSTETAAVCKNE----KLLNKLESSSYNKSNMDQLI--AIVNFLEKKNI 310
KSN+ N S T A+C + K ES SYNKSNM+ I I++ + I
Sbjct: 370 KSNIKNNVYSYSLTIAMAICMSAIAPVLYTTKAESFSYNKSNMNSEINKKIISIVRLTGI 429
Query: 311 NYI 319
YI
Sbjct: 430 KYI 432
>UniRef50_Q54T72 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 119
Score = 31.1 bits (67), Expect = 8.5
Identities = 23/82 (28%), Positives = 46/82 (56%), Gaps = 7/82 (8%)
Frame = +2
Query: 137 KGLQKSN--MVNMPEQQSSTETAAVCKNEKLLNKLESSSYNKSNMDQLIAIVNFLEKKNI 310
K ++K+N VN+P+Q +S K +K+++ K M++ + +++ + KKN
Sbjct: 30 KKIKKTNNQSVNLPKQTTSRIKHIQSKK----SKIKTIQKKKKKMEKTLNVISKINKKNE 85
Query: 311 N----YILNV-MPVMQDERKMS 361
N Y+LN+ + ++ ERK+S
Sbjct: 86 NKTFIYLLNIWILIISFERKLS 107
>UniRef50_O14802 Cluster: DNA-directed RNA polymerase III subunit
RPC1; n=17; Bilateria|Rep: DNA-directed RNA polymerase
III subunit RPC1 - Homo sapiens (Human)
Length = 1391
Score = 31.1 bits (67), Expect = 8.5
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 6/47 (12%)
Frame = +3
Query: 30 ITDKCSKRKVCLH---HKRIARLLGIKKIYHQEY---KRVVSKVYKN 152
I+DKC K+ +C H + G+ KI H++Y K+VV + N
Sbjct: 146 ISDKCRKKNICHHCGAFNGTVKKCGLLKIIHEKYKTNKKVVDPIVSN 192
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 377,420,051
Number of Sequences: 1657284
Number of extensions: 7111308
Number of successful extensions: 20553
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 19829
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20540
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 17349842203
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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