Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc7l15
         (401 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006701-1|AAM97962.1|  327|Caenorhabditis elegans Hypothetical ...    30   0.71 
Z50110-3|CAA90445.2|  459|Caenorhabditis elegans Hypothetical pr...    29   0.94 
Z37092-3|CAA85454.1|  266|Caenorhabditis elegans Hypothetical pr...    27   6.7  
AC025723-10|AAK29940.1|  691|Caenorhabditis elegans Mammalian fe...    27   6.7  
U58754-2|AAB00671.1|  391|Caenorhabditis elegans Hypothetical pr...    26   8.8  
AL031633-6|CAA21014.3|  225|Caenorhabditis elegans Hypothetical ...    26   8.8  

>AC006701-1|AAM97962.1|  327|Caenorhabditis elegans Hypothetical
           protein Y104H12D.2 protein.
          Length = 327

 Score = 29.9 bits (64), Expect = 0.71
 Identities = 17/40 (42%), Positives = 23/40 (57%)
 Frame = +2

Query: 197 AAVCKNEKLLNKLESSSYNKSNMDQLIAIVNFLEKKNINY 316
           AA  KNE LL+ L+  SYN++   Q++ I     K N NY
Sbjct: 34  AARTKNETLLSLLDKFSYNET--VQMVVIKQIGRKNNCNY 71


>Z50110-3|CAA90445.2|  459|Caenorhabditis elegans Hypothetical
           protein F18H3.4 protein.
          Length = 459

 Score = 29.5 bits (63), Expect = 0.94
 Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
 Frame = +2

Query: 149 KSNMVNMPEQQSSTETAAVCKNEKLLNKLESSSYNKSNMDQLIAIVNFLEKKNINYIL-- 322
           K N+    EQ   TE  A+ +N+KLL  L   + ++  MDQ +   N ++K  + + L  
Sbjct: 121 KRNLSARDEQALVTEIDALKRNKKLLESLAEITSHRKGMDQELE-KNRIQKHKVYFELTS 179

Query: 323 --NVMPVMQDERK 355
             N    M+ ER+
Sbjct: 180 CQNRFKQMKQERR 192


>Z37092-3|CAA85454.1|  266|Caenorhabditis elegans Hypothetical
           protein F44F4.3 protein.
          Length = 266

 Score = 26.6 bits (56), Expect = 6.7
 Identities = 12/46 (26%), Positives = 23/46 (50%)
 Frame = +2

Query: 161 VNMPEQQSSTETAAVCKNEKLLNKLESSSYNKSNMDQLIAIVNFLE 298
           V + E Q   E +++CK E   +K+E  +  ++ M  +   + F E
Sbjct: 70  VTLEEIQGKRELSSICKMEAYTSKIEDKTKQRNYMATITRQLKFSE 115


>AC025723-10|AAK29940.1|  691|Caenorhabditis elegans Mammalian fe65
           homolog protein1, isoform a protein.
          Length = 691

 Score = 26.6 bits (56), Expect = 6.7
 Identities = 17/54 (31%), Positives = 27/54 (50%)
 Frame = +2

Query: 188 TETAAVCKNEKLLNKLESSSYNKSNMDQLIAIVNFLEKKNINYILNVMPVMQDE 349
           T +   CK +K    L S    + N+D  I  V+F +KK I ++     V+Q+E
Sbjct: 33  TLSLGTCKQQKKKKNLYSDLACRKNVDIFIIYVSFEKKKEI-FLEFFHHVLQEE 85


>U58754-2|AAB00671.1|  391|Caenorhabditis elegans Hypothetical
           protein C39H7.4 protein.
          Length = 391

 Score = 26.2 bits (55), Expect = 8.8
 Identities = 14/42 (33%), Positives = 20/42 (47%)
 Frame = -2

Query: 283 NSN*LVHVGFVVRARFQFIQQLFIFAHGRSFCRRLLLRHVYH 158
           N N    V FV  A     Q +   AHG S+ +  +L ++YH
Sbjct: 239 NENVCYIVSFVAGAFILSSQVVLTTAHGNSYKKEKILANLYH 280


>AL031633-6|CAA21014.3|  225|Caenorhabditis elegans Hypothetical
           protein Y39A1A.8 protein.
          Length = 225

 Score = 26.2 bits (55), Expect = 8.8
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = -1

Query: 62  THLTLRTFVGNYC 24
           +HLT  T+VGNYC
Sbjct: 123 SHLTKTTYVGNYC 135


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,117,263
Number of Sequences: 27780
Number of extensions: 184918
Number of successful extensions: 496
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 491
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 496
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 630384202
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)