Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc7l13
(691 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 33 0.25
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 33 0.25
D83173-1|BAA11828.1| 1518|Caenorhabditis elegans laminin A protein. 33 0.25
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 33 0.25
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 33 0.25
Z81096-8|CAD54149.2| 922|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z81096-6|CAJ80827.1| 691|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z81096-5|CAD54150.1| 507|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z81096-4|CAB54264.2| 689|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z81096-3|CAB54265.2| 747|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z78065-11|CAD54155.2| 922|Caenorhabditis elegans Hypothetical p... 29 3.1
Z78065-10|CAJ80826.1| 691|Caenorhabditis elegans Hypothetical p... 29 3.1
Z78065-8|CAD54156.1| 507|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z78065-7|CAB54297.2| 689|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z78065-6|CAB54298.2| 747|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z78065-1|CAD54154.1| 547|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z92786-4|CAB07206.1| 553|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z29094-7|CAA82342.2| 453|Caenorhabditis elegans Hypothetical pr... 28 7.2
AF039052-12|AAF98633.1| 391|Caenorhabditis elegans Hypothetical... 28 7.2
AF016441-3|AAB65909.2| 744|Caenorhabditis elegans Hypothetical ... 28 7.2
Z81510-4|CAB04164.1| 839|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z78541-3|CAD44120.1| 733|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z70269-4|CAA94223.2| 733|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z70269-1|CAD44161.1| 770|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z50005-1|CAA90294.1| 334|Caenorhabditis elegans Hypothetical pr... 27 9.6
AF016448-10|ABR92607.1| 849|Caenorhabditis elegans Smek (dictyo... 27 9.6
AF016448-8|AAW30665.1| 536|Caenorhabditis elegans Smek (dictyos... 27 9.6
AF016448-7|ABR92606.1| 1085|Caenorhabditis elegans Smek (dictyos... 27 9.6
>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical protein
K08C7.3b protein.
Length = 3672
Score = 32.7 bits (71), Expect = 0.25
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Frame = +1
Query: 334 VLDQNFDNDFILTVYRMANVVTKQVRPYNSIDEKHHYNTVRNVLILIK-NARLVLSNSVK 510
VL + + D ILTV ++ T ++ S DEK HY ++R +I+ +A SN V
Sbjct: 3122 VLSVSINEDGILTVTSGEDIATLELAA--SPDEKWHYVSIRKTKYIIRIDADDSFSNEVA 3179
Query: 511 KQYYDD 528
+++ DD
Sbjct: 3180 RKHADD 3185
>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical protein
K08C7.3a protein.
Length = 3704
Score = 32.7 bits (71), Expect = 0.25
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Frame = +1
Query: 334 VLDQNFDNDFILTVYRMANVVTKQVRPYNSIDEKHHYNTVRNVLILIK-NARLVLSNSVK 510
VL + + D ILTV ++ T ++ S DEK HY ++R +I+ +A SN V
Sbjct: 3122 VLSVSINEDGILTVTSGEDIATLELAA--SPDEKWHYVSIRKTKYIIRIDADDSFSNEVA 3179
Query: 511 KQYYDD 528
+++ DD
Sbjct: 3180 RKHADD 3185
>D83173-1|BAA11828.1| 1518|Caenorhabditis elegans laminin A protein.
Length = 1518
Score = 32.7 bits (71), Expect = 0.25
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Frame = +1
Query: 334 VLDQNFDNDFILTVYRMANVVTKQVRPYNSIDEKHHYNTVRNVLILIK-NARLVLSNSVK 510
VL + + D ILTV ++ T ++ S DEK HY ++R +I+ +A SN V
Sbjct: 936 VLSVSINEDGILTVTSGEDIATLELAA--SPDEKWHYVSIRKTKYIIRIDADDSFSNEVA 993
Query: 511 KQYYDD 528
+++ DD
Sbjct: 994 RKHADD 999
>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3704
Score = 32.7 bits (71), Expect = 0.25
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Frame = +1
Query: 334 VLDQNFDNDFILTVYRMANVVTKQVRPYNSIDEKHHYNTVRNVLILIK-NARLVLSNSVK 510
VL + + D ILTV ++ T ++ S DEK HY ++R +I+ +A SN V
Sbjct: 3122 VLSVSINEDGILTVTSGEDIATLELAA--SPDEKWHYVSIRKTKYIIRIDADDSFSNEVA 3179
Query: 511 KQYYDD 528
+++ DD
Sbjct: 3180 RKHADD 3185
>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
protein.
Length = 3704
Score = 32.7 bits (71), Expect = 0.25
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Frame = +1
Query: 334 VLDQNFDNDFILTVYRMANVVTKQVRPYNSIDEKHHYNTVRNVLILIK-NARLVLSNSVK 510
VL + + D ILTV ++ T ++ S DEK HY ++R +I+ +A SN V
Sbjct: 3122 VLSVSINEDGILTVTSGEDIATLELAA--SPDEKWHYVSIRKTKYIIRIDADDSFSNEVA 3179
Query: 511 KQYYDD 528
+++ DD
Sbjct: 3180 RKHADD 3185
>Z81096-8|CAD54149.2| 922|Caenorhabditis elegans Hypothetical
protein T09E8.1c protein.
Length = 922
Score = 29.1 bits (62), Expect = 3.1
Identities = 27/122 (22%), Positives = 57/122 (46%), Gaps = 4/122 (3%)
Frame = +1
Query: 160 SDYCTLIMSKRVREMSVVSDETAKRI--RQNEHYHAKNESFLGFCNLEEIDYYQCLKMQY 333
SD + KR+RE+ + E + Q+ H +K+ F G NL + L++Q
Sbjct: 516 SDARIAYLEKRIRELELTQKEQSSHSTPSQSRHSSSKSSHFNGSSNLSTSEQ---LRLQE 572
Query: 334 VLDQNFDNDFILTVYRMANVVTKQVRPYNSID--EKHHYNTVRNVLILIKNARLVLSNSV 507
+ D+ + D ++ ++ +K ++ Y I+ + + ++N++ + AR L+ V
Sbjct: 573 MSDELANKD-----RKVTSLESKLLKAYQRIERLNEEYDGKIKNLMYDSERARDDLTRCV 627
Query: 508 KK 513
K
Sbjct: 628 DK 629
>Z81096-6|CAJ80827.1| 691|Caenorhabditis elegans Hypothetical
protein T09E8.1f protein.
Length = 691
Score = 29.1 bits (62), Expect = 3.1
Identities = 27/122 (22%), Positives = 57/122 (46%), Gaps = 4/122 (3%)
Frame = +1
Query: 160 SDYCTLIMSKRVREMSVVSDETAKRI--RQNEHYHAKNESFLGFCNLEEIDYYQCLKMQY 333
SD + KR+RE+ + E + Q+ H +K+ F G NL + L++Q
Sbjct: 285 SDARIAYLEKRIRELELTQKEQSSHSTPSQSRHSSSKSSHFNGSSNLSTSEQ---LRLQE 341
Query: 334 VLDQNFDNDFILTVYRMANVVTKQVRPYNSID--EKHHYNTVRNVLILIKNARLVLSNSV 507
+ D+ + D ++ ++ +K ++ Y I+ + + ++N++ + AR L+ V
Sbjct: 342 MSDELANKD-----RKVTSLESKLLKAYQRIERLNEEYDGKIKNLMYDSERARDDLTRCV 396
Query: 508 KK 513
K
Sbjct: 397 DK 398
>Z81096-5|CAD54150.1| 507|Caenorhabditis elegans Hypothetical
protein T09E8.1e protein.
Length = 507
Score = 29.1 bits (62), Expect = 3.1
Identities = 27/122 (22%), Positives = 57/122 (46%), Gaps = 4/122 (3%)
Frame = +1
Query: 160 SDYCTLIMSKRVREMSVVSDETAKRI--RQNEHYHAKNESFLGFCNLEEIDYYQCLKMQY 333
SD + KR+RE+ + E + Q+ H +K+ F G NL + L++Q
Sbjct: 101 SDARIAYLEKRIRELELTQKEQSSHSTPSQSRHSSSKSSHFNGSSNLSTSEQ---LRLQE 157
Query: 334 VLDQNFDNDFILTVYRMANVVTKQVRPYNSID--EKHHYNTVRNVLILIKNARLVLSNSV 507
+ D+ + D ++ ++ +K ++ Y I+ + + ++N++ + AR L+ V
Sbjct: 158 MSDELANKD-----RKVTSLESKLLKAYQRIERLNEEYDGKIKNLMYDSERARDDLTRCV 212
Query: 508 KK 513
K
Sbjct: 213 DK 214
>Z81096-4|CAB54264.2| 689|Caenorhabditis elegans Hypothetical
protein T09E8.1b protein.
Length = 689
Score = 29.1 bits (62), Expect = 3.1
Identities = 27/122 (22%), Positives = 57/122 (46%), Gaps = 4/122 (3%)
Frame = +1
Query: 160 SDYCTLIMSKRVREMSVVSDETAKRI--RQNEHYHAKNESFLGFCNLEEIDYYQCLKMQY 333
SD + KR+RE+ + E + Q+ H +K+ F G NL + L++Q
Sbjct: 283 SDARIAYLEKRIRELELTQKEQSSHSTPSQSRHSSSKSSHFNGSSNLSTSEQ---LRLQE 339
Query: 334 VLDQNFDNDFILTVYRMANVVTKQVRPYNSID--EKHHYNTVRNVLILIKNARLVLSNSV 507
+ D+ + D ++ ++ +K ++ Y I+ + + ++N++ + AR L+ V
Sbjct: 340 MSDELANKD-----RKVTSLESKLLKAYQRIERLNEEYDGKIKNLMYDSERARDDLTRCV 394
Query: 508 KK 513
K
Sbjct: 395 DK 396
>Z81096-3|CAB54265.2| 747|Caenorhabditis elegans Hypothetical
protein T09E8.1a protein.
Length = 747
Score = 29.1 bits (62), Expect = 3.1
Identities = 27/122 (22%), Positives = 57/122 (46%), Gaps = 4/122 (3%)
Frame = +1
Query: 160 SDYCTLIMSKRVREMSVVSDETAKRI--RQNEHYHAKNESFLGFCNLEEIDYYQCLKMQY 333
SD + KR+RE+ + E + Q+ H +K+ F G NL + L++Q
Sbjct: 341 SDARIAYLEKRIRELELTQKEQSSHSTPSQSRHSSSKSSHFNGSSNLSTSEQ---LRLQE 397
Query: 334 VLDQNFDNDFILTVYRMANVVTKQVRPYNSID--EKHHYNTVRNVLILIKNARLVLSNSV 507
+ D+ + D ++ ++ +K ++ Y I+ + + ++N++ + AR L+ V
Sbjct: 398 MSDELANKD-----RKVTSLESKLLKAYQRIERLNEEYDGKIKNLMYDSERARDDLTRCV 452
Query: 508 KK 513
K
Sbjct: 453 DK 454
>Z78065-11|CAD54155.2| 922|Caenorhabditis elegans Hypothetical
protein T09E8.1c protein.
Length = 922
Score = 29.1 bits (62), Expect = 3.1
Identities = 27/122 (22%), Positives = 57/122 (46%), Gaps = 4/122 (3%)
Frame = +1
Query: 160 SDYCTLIMSKRVREMSVVSDETAKRI--RQNEHYHAKNESFLGFCNLEEIDYYQCLKMQY 333
SD + KR+RE+ + E + Q+ H +K+ F G NL + L++Q
Sbjct: 516 SDARIAYLEKRIRELELTQKEQSSHSTPSQSRHSSSKSSHFNGSSNLSTSEQ---LRLQE 572
Query: 334 VLDQNFDNDFILTVYRMANVVTKQVRPYNSID--EKHHYNTVRNVLILIKNARLVLSNSV 507
+ D+ + D ++ ++ +K ++ Y I+ + + ++N++ + AR L+ V
Sbjct: 573 MSDELANKD-----RKVTSLESKLLKAYQRIERLNEEYDGKIKNLMYDSERARDDLTRCV 627
Query: 508 KK 513
K
Sbjct: 628 DK 629
>Z78065-10|CAJ80826.1| 691|Caenorhabditis elegans Hypothetical
protein T09E8.1f protein.
Length = 691
Score = 29.1 bits (62), Expect = 3.1
Identities = 27/122 (22%), Positives = 57/122 (46%), Gaps = 4/122 (3%)
Frame = +1
Query: 160 SDYCTLIMSKRVREMSVVSDETAKRI--RQNEHYHAKNESFLGFCNLEEIDYYQCLKMQY 333
SD + KR+RE+ + E + Q+ H +K+ F G NL + L++Q
Sbjct: 285 SDARIAYLEKRIRELELTQKEQSSHSTPSQSRHSSSKSSHFNGSSNLSTSEQ---LRLQE 341
Query: 334 VLDQNFDNDFILTVYRMANVVTKQVRPYNSID--EKHHYNTVRNVLILIKNARLVLSNSV 507
+ D+ + D ++ ++ +K ++ Y I+ + + ++N++ + AR L+ V
Sbjct: 342 MSDELANKD-----RKVTSLESKLLKAYQRIERLNEEYDGKIKNLMYDSERARDDLTRCV 396
Query: 508 KK 513
K
Sbjct: 397 DK 398
>Z78065-8|CAD54156.1| 507|Caenorhabditis elegans Hypothetical
protein T09E8.1e protein.
Length = 507
Score = 29.1 bits (62), Expect = 3.1
Identities = 27/122 (22%), Positives = 57/122 (46%), Gaps = 4/122 (3%)
Frame = +1
Query: 160 SDYCTLIMSKRVREMSVVSDETAKRI--RQNEHYHAKNESFLGFCNLEEIDYYQCLKMQY 333
SD + KR+RE+ + E + Q+ H +K+ F G NL + L++Q
Sbjct: 101 SDARIAYLEKRIRELELTQKEQSSHSTPSQSRHSSSKSSHFNGSSNLSTSEQ---LRLQE 157
Query: 334 VLDQNFDNDFILTVYRMANVVTKQVRPYNSID--EKHHYNTVRNVLILIKNARLVLSNSV 507
+ D+ + D ++ ++ +K ++ Y I+ + + ++N++ + AR L+ V
Sbjct: 158 MSDELANKD-----RKVTSLESKLLKAYQRIERLNEEYDGKIKNLMYDSERARDDLTRCV 212
Query: 508 KK 513
K
Sbjct: 213 DK 214
>Z78065-7|CAB54297.2| 689|Caenorhabditis elegans Hypothetical
protein T09E8.1b protein.
Length = 689
Score = 29.1 bits (62), Expect = 3.1
Identities = 27/122 (22%), Positives = 57/122 (46%), Gaps = 4/122 (3%)
Frame = +1
Query: 160 SDYCTLIMSKRVREMSVVSDETAKRI--RQNEHYHAKNESFLGFCNLEEIDYYQCLKMQY 333
SD + KR+RE+ + E + Q+ H +K+ F G NL + L++Q
Sbjct: 283 SDARIAYLEKRIRELELTQKEQSSHSTPSQSRHSSSKSSHFNGSSNLSTSEQ---LRLQE 339
Query: 334 VLDQNFDNDFILTVYRMANVVTKQVRPYNSID--EKHHYNTVRNVLILIKNARLVLSNSV 507
+ D+ + D ++ ++ +K ++ Y I+ + + ++N++ + AR L+ V
Sbjct: 340 MSDELANKD-----RKVTSLESKLLKAYQRIERLNEEYDGKIKNLMYDSERARDDLTRCV 394
Query: 508 KK 513
K
Sbjct: 395 DK 396
>Z78065-6|CAB54298.2| 747|Caenorhabditis elegans Hypothetical
protein T09E8.1a protein.
Length = 747
Score = 29.1 bits (62), Expect = 3.1
Identities = 27/122 (22%), Positives = 57/122 (46%), Gaps = 4/122 (3%)
Frame = +1
Query: 160 SDYCTLIMSKRVREMSVVSDETAKRI--RQNEHYHAKNESFLGFCNLEEIDYYQCLKMQY 333
SD + KR+RE+ + E + Q+ H +K+ F G NL + L++Q
Sbjct: 341 SDARIAYLEKRIRELELTQKEQSSHSTPSQSRHSSSKSSHFNGSSNLSTSEQ---LRLQE 397
Query: 334 VLDQNFDNDFILTVYRMANVVTKQVRPYNSID--EKHHYNTVRNVLILIKNARLVLSNSV 507
+ D+ + D ++ ++ +K ++ Y I+ + + ++N++ + AR L+ V
Sbjct: 398 MSDELANKD-----RKVTSLESKLLKAYQRIERLNEEYDGKIKNLMYDSERARDDLTRCV 452
Query: 508 KK 513
K
Sbjct: 453 DK 454
>Z78065-1|CAD54154.1| 547|Caenorhabditis elegans Hypothetical
protein T09E8.1d protein.
Length = 547
Score = 29.1 bits (62), Expect = 3.1
Identities = 27/122 (22%), Positives = 57/122 (46%), Gaps = 4/122 (3%)
Frame = +1
Query: 160 SDYCTLIMSKRVREMSVVSDETAKRI--RQNEHYHAKNESFLGFCNLEEIDYYQCLKMQY 333
SD + KR+RE+ + E + Q+ H +K+ F G NL + L++Q
Sbjct: 141 SDARIAYLEKRIRELELTQKEQSSHSTPSQSRHSSSKSSHFNGSSNLSTSEQ---LRLQE 197
Query: 334 VLDQNFDNDFILTVYRMANVVTKQVRPYNSID--EKHHYNTVRNVLILIKNARLVLSNSV 507
+ D+ + D ++ ++ +K ++ Y I+ + + ++N++ + AR L+ V
Sbjct: 198 MSDELANKD-----RKVTSLESKLLKAYQRIERLNEEYDGKIKNLMYDSERARDDLTRCV 252
Query: 508 KK 513
K
Sbjct: 253 DK 254
>Z92786-4|CAB07206.1| 553|Caenorhabditis elegans Hypothetical
protein F47H4.7 protein.
Length = 553
Score = 27.9 bits (59), Expect = 7.2
Identities = 17/57 (29%), Positives = 30/57 (52%)
Frame = +1
Query: 133 NLELRPSS*SDYCTLIMSKRVREMSVVSDETAKRIRQNEHYHAKNESFLGFCNLEEI 303
NLEL P S ++ IM VRE+ + ++A + +H K++ F + L+E+
Sbjct: 117 NLELEPRSLAEMHNDIMKNIVREL---NSQSANSPGPSARHHDKDDDFPAYNQLKEL 170
>Z29094-7|CAA82342.2| 453|Caenorhabditis elegans Hypothetical
protein C07A9.8 protein.
Length = 453
Score = 27.9 bits (59), Expect = 7.2
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -1
Query: 337 ERIAFLNIDNNQFLPSCKTPKKIHFWHDSVR 245
E I++L + N+ + + K P K+ W SVR
Sbjct: 407 EEISYLKKEENKMIAAGKKPNKLKLWVKSVR 437
>AF039052-12|AAF98633.1| 391|Caenorhabditis elegans Hypothetical
protein T22D1.12 protein.
Length = 391
Score = 27.9 bits (59), Expect = 7.2
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +2
Query: 251 TIMPKMNLFWGFATWKKLIIINV*KCNTF 337
T+ +NLFW F W + V NTF
Sbjct: 92 TLYTSLNLFWPFGDWSCKFLAGVQAVNTF 120
>AF016441-3|AAB65909.2| 744|Caenorhabditis elegans Hypothetical
protein M03F8.3 protein.
Length = 744
Score = 27.9 bits (59), Expect = 7.2
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +2
Query: 197 VKCRLFRMKRPNAFDKTNTIMPKMNLFWGFATWKKLIIINV 319
++C+ R N FD+ TIMP+ FW ++ + +I N+
Sbjct: 131 MRCKQINHAR-NVFDRAITIMPRAMQFWLKYSYMEEVIENI 170
>Z81510-4|CAB04164.1| 839|Caenorhabditis elegans Hypothetical
protein F21D9.5 protein.
Length = 839
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/54 (24%), Positives = 26/54 (48%)
Frame = +1
Query: 406 VRPYNSIDEKHHYNTVRNVLILIKNARLVLSNSVKKQYYDDVLNLKKIQTWNRT 567
++ + S E H Y ++LIL++ V + +VLN +++ W+ T
Sbjct: 590 IKVFGSCTEMHGYYRNHSILILLQRDEKVCKILESALHIRNVLNQTEVRVWDDT 643
>Z78541-3|CAD44120.1| 733|Caenorhabditis elegans Hypothetical
protein ZK1086.1a protein.
Length = 733
Score = 27.5 bits (58), Expect = 9.6
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -3
Query: 395 TTLAILYTVKIKSLSKFWSRTYCIFK 318
T + + T+KI+ K W+R YC+ K
Sbjct: 38 TVVVMADTLKIRGALKRWNRYYCVLK 63
>Z70269-4|CAA94223.2| 733|Caenorhabditis elegans Hypothetical
protein ZK1086.1a protein.
Length = 733
Score = 27.5 bits (58), Expect = 9.6
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -3
Query: 395 TTLAILYTVKIKSLSKFWSRTYCIFK 318
T + + T+KI+ K W+R YC+ K
Sbjct: 38 TVVVMADTLKIRGALKRWNRYYCVLK 63
>Z70269-1|CAD44161.1| 770|Caenorhabditis elegans Hypothetical
protein ZK1086.1b protein.
Length = 770
Score = 27.5 bits (58), Expect = 9.6
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -3
Query: 395 TTLAILYTVKIKSLSKFWSRTYCIFK 318
T + + T+KI+ K W+R YC+ K
Sbjct: 75 TVVVMADTLKIRGALKRWNRYYCVLK 100
>Z50005-1|CAA90294.1| 334|Caenorhabditis elegans Hypothetical
protein F16H9.2 protein.
Length = 334
Score = 27.5 bits (58), Expect = 9.6
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = -3
Query: 251 CSFCRMRLAVSSETTDISR-TRLDIISVQ*SLYDDGRSSRF 132
C FCR+ V D+SR T L+ + + S +D R + F
Sbjct: 63 CKFCRLHKCVQKGMLDLSRYTHLERLICELSEFDSKRETLF 103
>AF016448-10|ABR92607.1| 849|Caenorhabditis elegans Smek
(dictyostelium suppressorof mek null) homolog protein 1,
isoform b protein.
Length = 849
Score = 27.5 bits (58), Expect = 9.6
Identities = 15/54 (27%), Positives = 27/54 (50%)
Frame = +1
Query: 388 NVVTKQVRPYNSIDEKHHYNTVRNVLILIKNARLVLSNSVKKQYYDDVLNLKKI 549
NVVTK + ++ H +R ++KN ++ N+V + DD N+K +
Sbjct: 107 NVVTKLCEVFRMCEDIEHTEGLRTFYSIVKNLFMLNRNTVIEMLLDD-NNIKDV 159
>AF016448-8|AAW30665.1| 536|Caenorhabditis elegans Smek
(dictyostelium suppressorof mek null) homolog protein 1,
isoform c protein.
Length = 536
Score = 27.5 bits (58), Expect = 9.6
Identities = 15/54 (27%), Positives = 27/54 (50%)
Frame = +1
Query: 388 NVVTKQVRPYNSIDEKHHYNTVRNVLILIKNARLVLSNSVKKQYYDDVLNLKKI 549
NVVTK + ++ H +R ++KN ++ N+V + DD N+K +
Sbjct: 343 NVVTKLCEVFRMCEDIEHTEGLRTFYSIVKNLFMLNRNTVIEMLLDD-NNIKDV 395
>AF016448-7|ABR92606.1| 1085|Caenorhabditis elegans Smek
(dictyostelium suppressorof mek null) homolog protein 1,
isoform a protein.
Length = 1085
Score = 27.5 bits (58), Expect = 9.6
Identities = 15/54 (27%), Positives = 27/54 (50%)
Frame = +1
Query: 388 NVVTKQVRPYNSIDEKHHYNTVRNVLILIKNARLVLSNSVKKQYYDDVLNLKKI 549
NVVTK + ++ H +R ++KN ++ N+V + DD N+K +
Sbjct: 343 NVVTKLCEVFRMCEDIEHTEGLRTFYSIVKNLFMLNRNTVIEMLLDD-NNIKDV 395
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,970,496
Number of Sequences: 27780
Number of extensions: 351824
Number of successful extensions: 913
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 886
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 913
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1581836700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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