Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc7k24
         (704 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL110490-11|CAB54452.1|  620|Caenorhabditis elegans Hypothetical...    40   0.002
Z32680-4|CAA83601.1|  273|Caenorhabditis elegans Hypothetical pr...    31   1.1  
AJ312288-1|CAC41972.1|  278|Caenorhabditis elegans putative tran...    31   1.1  
Z77666-12|CAJ43911.2|  896|Caenorhabditis elegans Hypothetical p...    28   7.5  
Z77666-9|CAJ43912.1|  541|Caenorhabditis elegans Hypothetical pr...    28   7.5  
Z77666-8|CAJ43910.1|  493|Caenorhabditis elegans Hypothetical pr...    28   7.5  
Z77666-7|CAB01228.1| 1221|Caenorhabditis elegans Hypothetical pr...    28   7.5  

>AL110490-11|CAB54452.1|  620|Caenorhabditis elegans Hypothetical
           protein Y48B6A.12 protein.
          Length = 620

 Score = 39.5 bits (88), Expect = 0.002
 Identities = 16/34 (47%), Positives = 21/34 (61%)
 Frame = +3

Query: 369 ASVQPQPLDTEEFIRAQMYSVEYGAALPPAYPWP 470
           A++ P+P D E FIR  +YSVEY   +   Y WP
Sbjct: 566 ATLHPKPDDMEMFIRQNLYSVEYDELINKTYEWP 599


>Z32680-4|CAA83601.1|  273|Caenorhabditis elegans Hypothetical
           protein C28A5.4 protein.
          Length = 273

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 16/70 (22%), Positives = 34/70 (48%)
 Frame = +3

Query: 267 PDQDPMKQNVVVLMMDQQREPTGNAAVAEIVTGKASVQPQPLDTEEFIRAQMYSVEYGAA 446
           P+  PM ++V++    + R    ++   E+   K    P  L+ E++    +Y  ++   
Sbjct: 181 PESPPMGESVMIQESSEPRTLVSSSIKTEM---KEEYPPMTLN-EQYASPYLYGSDFSTI 236

Query: 447 LPPAYPWPDN 476
           LPP+  +P+N
Sbjct: 237 LPPSQGFPNN 246


>AJ312288-1|CAC41972.1|  278|Caenorhabditis elegans putative
           transcription factor protein.
          Length = 278

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 16/70 (22%), Positives = 34/70 (48%)
 Frame = +3

Query: 267 PDQDPMKQNVVVLMMDQQREPTGNAAVAEIVTGKASVQPQPLDTEEFIRAQMYSVEYGAA 446
           P+  PM ++V++    + R    ++   E+   K    P  L+ E++    +Y  ++   
Sbjct: 186 PESPPMGESVMIQESSEPRTLVSSSIKTEM---KEEYPPMTLN-EQYASPYLYGSDFSTI 241

Query: 447 LPPAYPWPDN 476
           LPP+  +P+N
Sbjct: 242 LPPSQGFPNN 251


>Z77666-12|CAJ43911.2|  896|Caenorhabditis elegans Hypothetical
           protein K08E7.5c protein.
          Length = 896

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
 Frame = +3

Query: 318 QREPTGN-AAVAEIVTGKASVQPQPLDTEEFIRAQMYSVEYGAALPPAYPWP 470
           + EP  N   +   V G A +QPQP+  ++ I  Q +  +Y    P +Y  P
Sbjct: 584 ESEPVQNFVPLQNTVGGNAYIQPQPVAQQQTIYQQPFQ-QYQPQYPQSYQQP 634


>Z77666-9|CAJ43912.1|  541|Caenorhabditis elegans Hypothetical
           protein K08E7.5d protein.
          Length = 541

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
 Frame = +3

Query: 318 QREPTGN-AAVAEIVTGKASVQPQPLDTEEFIRAQMYSVEYGAALPPAYPWP 470
           + EP  N   +   V G A +QPQP+  ++ I  Q +  +Y    P +Y  P
Sbjct: 229 ESEPVQNFVPLQNTVGGNAYIQPQPVAQQQTIYQQPFQ-QYQPQYPQSYQQP 279


>Z77666-8|CAJ43910.1|  493|Caenorhabditis elegans Hypothetical
           protein K08E7.5b protein.
          Length = 493

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
 Frame = +3

Query: 318 QREPTGN-AAVAEIVTGKASVQPQPLDTEEFIRAQMYSVEYGAALPPAYPWP 470
           + EP  N   +   V G A +QPQP+  ++ I  Q +  +Y    P +Y  P
Sbjct: 181 ESEPVQNFVPLQNTVGGNAYIQPQPVAQQQTIYQQPFQ-QYQPQYPQSYQQP 231


>Z77666-7|CAB01228.1| 1221|Caenorhabditis elegans Hypothetical protein
            K08E7.5a protein.
          Length = 1221

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
 Frame = +3

Query: 318  QREPTGN-AAVAEIVTGKASVQPQPLDTEEFIRAQMYSVEYGAALPPAYPWP 470
            + EP  N   +   V G A +QPQP+  ++ I  Q +  +Y    P +Y  P
Sbjct: 909  ESEPVQNFVPLQNTVGGNAYIQPQPVAQQQTIYQQPFQ-QYQPQYPQSYQQP 959


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,453,346
Number of Sequences: 27780
Number of extensions: 249114
Number of successful extensions: 666
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 650
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 666
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1634564590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)