Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc7k22
(665 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY069866-1|AAL40011.1| 426|Drosophila melanogaster SD10629p pro... 31 1.1
AE013599-1952|AAF58207.2| 426|Drosophila melanogaster CG10155-P... 31 1.1
X75541-1|CAA53229.1| 1355|Drosophila melanogaster spalt protein ... 31 1.4
AE014134-2066|AAF53097.3| 1365|Drosophila melanogaster CG6464-PA... 31 1.4
AY095206-1|AAM12299.1| 965|Drosophila melanogaster SD06937p pro... 30 2.5
AY094803-1|AAM11156.1| 1217|Drosophila melanogaster LD24832p pro... 30 2.5
AE014134-2273|AAF53238.1| 1217|Drosophila melanogaster CG9934-PA... 30 2.5
X07134-1|CAA30146.1| 349|Drosophila melanogaster protein ( D. m... 29 7.5
X07133-1|CAA30145.1| 304|Drosophila melanogaster protein ( D. m... 29 7.5
X07132-1|CAA30144.1| 643|Drosophila melanogaster protein ( D. m... 29 7.5
X07131-1|CAA30143.1| 616|Drosophila melanogaster protein ( D. m... 29 7.5
X06742-1|CAA29917.1| 656|Drosophila melanogaster Shaker protein. 29 7.5
X06184-1|CAA29549.1| 304|Drosophila melanogaster protein ( Dros... 29 7.5
M17211-1|AAA28417.1| 616|Drosophila melanogaster protein ( D.me... 29 7.5
AY118398-1|AAM48427.1| 571|Drosophila melanogaster RE58855p pro... 29 7.5
AJ487856-1|CAD32253.1| 1830|Drosophila melanogaster hypothetical... 29 7.5
AE014298-2648|AAS65396.1| 349|Drosophila melanogaster CG12348-P... 29 7.5
AE014298-2647|AAN09452.1| 304|Drosophila melanogaster CG12348-P... 29 7.5
AE014298-2646|AAF48786.3| 655|Drosophila melanogaster CG12348-P... 29 7.5
AE014298-2645|AAF48790.2| 643|Drosophila melanogaster CG12348-P... 29 7.5
AE014298-2644|AAS65395.1| 616|Drosophila melanogaster CG12348-P... 29 7.5
AE014298-2643|AAF48785.3| 616|Drosophila melanogaster CG12348-P... 29 7.5
AE014298-2642|AAN09451.1| 571|Drosophila melanogaster CG12348-P... 29 7.5
>AY069866-1|AAL40011.1| 426|Drosophila melanogaster SD10629p
protein.
Length = 426
Score = 31.5 bits (68), Expect = 1.1
Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 4/69 (5%)
Frame = -1
Query: 629 RRGAAPRGCAGLRAGEDGVLTGLGCARCSLGT*ALMHCASGVSSSNA-IPSTRVVSESVC 453
RRGA R+G + ++G+GCARC + HC S A P SE+ C
Sbjct: 329 RRGACEYAPDAFRSGYE-CISGMGCARC-----MIYHCMSDAEGETAQHPCDCSASEAGC 382
Query: 452 ---WRGLPV 435
W GL +
Sbjct: 383 SKRWLGLAI 391
>AE013599-1952|AAF58207.2| 426|Drosophila melanogaster CG10155-PA
protein.
Length = 426
Score = 31.5 bits (68), Expect = 1.1
Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 4/69 (5%)
Frame = -1
Query: 629 RRGAAPRGCAGLRAGEDGVLTGLGCARCSLGT*ALMHCASGVSSSNA-IPSTRVVSESVC 453
RRGA R+G + ++G+GCARC + HC S A P SE+ C
Sbjct: 329 RRGACEYAPDAFRSGYE-CISGMGCARC-----MIYHCMSDAEGETAQHPCDCSASEAGC 382
Query: 452 ---WRGLPV 435
W GL +
Sbjct: 383 SKRWLGLAI 391
>X75541-1|CAA53229.1| 1355|Drosophila melanogaster spalt protein
protein.
Length = 1355
Score = 31.1 bits (67), Expect = 1.4
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = +1
Query: 340 RDIENVNPNTNSCSPITKRSPGPSKAKSPRVHTGKPLQQTDSETTLVE 483
+DI + CSP+T + S ++SP +P +Q+ SE ++ E
Sbjct: 50 KDIGSDQEENGGCSPLTTATTTASPSRSPEPEEEQPEEQSTSEQSIPE 97
>AE014134-2066|AAF53097.3| 1365|Drosophila melanogaster CG6464-PA
protein.
Length = 1365
Score = 31.1 bits (67), Expect = 1.4
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = +1
Query: 340 RDIENVNPNTNSCSPITKRSPGPSKAKSPRVHTGKPLQQTDSETTLVE 483
+DI + CSP+T + S ++SP +P +Q+ SE ++ E
Sbjct: 50 KDIGSDQEENGGCSPLTTATTTASPSRSPEPEEEQPEEQSTSEQSIPE 97
>AY095206-1|AAM12299.1| 965|Drosophila melanogaster SD06937p
protein.
Length = 965
Score = 30.3 bits (65), Expect = 2.5
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Frame = +1
Query: 31 RVPNFLSSYIWKFIIQN*VKMNISG--LEDEVNSPVKPDDAESPSKKKLRISNSTRKSWS 204
R PNFL K + VK + G L + + AE +K KL ++S+R W
Sbjct: 235 RQPNFLPPICTKISGREIVKCSFLGPFLSVSLFAEENIKFAEFTTKNKLEDASSSRLRWE 294
Query: 205 LMDKRTNYEVL 237
L RTN V+
Sbjct: 295 LHSMRTNMHVV 305
>AY094803-1|AAM11156.1| 1217|Drosophila melanogaster LD24832p
protein.
Length = 1217
Score = 30.3 bits (65), Expect = 2.5
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Frame = +1
Query: 31 RVPNFLSSYIWKFIIQN*VKMNISG--LEDEVNSPVKPDDAESPSKKKLRISNSTRKSWS 204
R PNFL K + VK + G L + + AE +K KL ++S+R W
Sbjct: 487 RQPNFLPPICTKISGREIVKCSFLGPFLSVSLFAEENIKFAEFTTKNKLEDASSSRLRWE 546
Query: 205 LMDKRTNYEVL 237
L RTN V+
Sbjct: 547 LHSMRTNMHVV 557
>AE014134-2273|AAF53238.1| 1217|Drosophila melanogaster CG9934-PA
protein.
Length = 1217
Score = 30.3 bits (65), Expect = 2.5
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Frame = +1
Query: 31 RVPNFLSSYIWKFIIQN*VKMNISG--LEDEVNSPVKPDDAESPSKKKLRISNSTRKSWS 204
R PNFL K + VK + G L + + AE +K KL ++S+R W
Sbjct: 487 RQPNFLPPICTKISGREIVKCSFLGPFLSVSLFAEENIKFAEFTTKNKLEDASSSRLRWE 546
Query: 205 LMDKRTNYEVL 237
L RTN V+
Sbjct: 547 LHSMRTNMHVV 557
>X07134-1|CAA30146.1| 349|Drosophila melanogaster protein ( D.
melanogaster larvalShaker ShE mRNA for put.
K(+)-channel. ).
Length = 349
Score = 28.7 bits (61), Expect = 7.5
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Frame = -3
Query: 282 LFIIIRLQQTNPHFL*YLVIRSFVHQTPTFPRRIT--YSKFFLARTFCIVWF 133
L I+I +T P F Y V + + T + FFL T CI+WF
Sbjct: 239 LSIVIFCLETLPEFKHYKVFNTTTNGTKIEEDEVPDITDPFFLIETLCIIWF 290
>X07133-1|CAA30145.1| 304|Drosophila melanogaster protein ( D.
melanogaster larvalShaker mRNA for put. K(+)-channel. ).
Length = 304
Score = 28.7 bits (61), Expect = 7.5
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Frame = -3
Query: 282 LFIIIRLQQTNPHFL*YLVIRSFVHQTPTFPRRIT--YSKFFLARTFCIVWF 133
L I+I +T P F Y V + + T + FFL T CI+WF
Sbjct: 194 LSIVIFCLETLPEFKHYKVFNTTTNGTKIEEDEVPDITDPFFLIETLCIIWF 245
>X07132-1|CAA30144.1| 643|Drosophila melanogaster protein ( D.
melanogaster (latepopul.) Shaker ShB mRNA for put.
K(+)-channel.).
Length = 643
Score = 28.7 bits (61), Expect = 7.5
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Frame = -3
Query: 282 LFIIIRLQQTNPHFL*YLVIRSFVHQTPTFPRRIT--YSKFFLARTFCIVWF 133
L I+I +T P F Y V + + T + FFL T CI+WF
Sbjct: 227 LSIVIFCLETLPEFKHYKVFNTTTNGTKIEEDEVPDITDPFFLIETLCIIWF 278
>X07131-1|CAA30143.1| 616|Drosophila melanogaster protein ( D.
melanogaster adultShaker ShA mRNA for put. K(+)-channel.
).
Length = 616
Score = 28.7 bits (61), Expect = 7.5
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Frame = -3
Query: 282 LFIIIRLQQTNPHFL*YLVIRSFVHQTPTFPRRIT--YSKFFLARTFCIVWF 133
L I+I +T P F Y V + + T + FFL T CI+WF
Sbjct: 239 LSIVIFCLETLPEFKHYKVFNTTTNGTKIEEDEVPDITDPFFLIETLCIIWF 290
>X06742-1|CAA29917.1| 656|Drosophila melanogaster Shaker protein.
Length = 656
Score = 28.7 bits (61), Expect = 7.5
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Frame = -3
Query: 282 LFIIIRLQQTNPHFL*YLVIRSFVHQTPTFPRRIT--YSKFFLARTFCIVWF 133
L I+I +T P F Y V + + T + FFL T CI+WF
Sbjct: 239 LSIVIFCLETLPEFKHYKVFNTTTNGTKIEEDEVPDITDPFFLIETLCIIWF 290
>X06184-1|CAA29549.1| 304|Drosophila melanogaster protein (
Drosophila mRNA forShaker (Sh) protein. ).
Length = 304
Score = 28.7 bits (61), Expect = 7.5
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Frame = -3
Query: 282 LFIIIRLQQTNPHFL*YLVIRSFVHQTPTFPRRIT--YSKFFLARTFCIVWF 133
L I+I +T P F Y V + + T + FFL T CI+WF
Sbjct: 194 LSIVIFCLETLPEFKHYKVFNTTTNGTKIEEDEVPDITDPFFLIETLCIIWF 245
>M17211-1|AAA28417.1| 616|Drosophila melanogaster protein (
D.melanogaster potassiumchannel (Shaker) mRNA, complete
cds. ).
Length = 616
Score = 28.7 bits (61), Expect = 7.5
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Frame = -3
Query: 282 LFIIIRLQQTNPHFL*YLVIRSFVHQTPTFPRRIT--YSKFFLARTFCIVWF 133
L I+I +T P F Y V + + T + FFL T CI+WF
Sbjct: 239 LSIVIFCLETLPEFKHYKVFNTTTNGTKIEEDEVPDITDPFFLIETLCIIWF 290
>AY118398-1|AAM48427.1| 571|Drosophila melanogaster RE58855p
protein.
Length = 571
Score = 28.7 bits (61), Expect = 7.5
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Frame = -3
Query: 282 LFIIIRLQQTNPHFL*YLVIRSFVHQTPTFPRRIT--YSKFFLARTFCIVWF 133
L I+I +T P F Y V + + T + FFL T CI+WF
Sbjct: 194 LSIVIFCLETLPEFKHYKVFNTTTNGTKIEEDEVPDITDPFFLIETLCIIWF 245
>AJ487856-1|CAD32253.1| 1830|Drosophila melanogaster hypothetical
protein protein.
Length = 1830
Score = 28.7 bits (61), Expect = 7.5
Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 6/57 (10%)
Frame = +1
Query: 322 KGTKRKRDIENVNPNTNSCSPITKRSPGPSKAKSPRVHTGKP------LQQTDSETT 474
+G K+K N SPI+ R K+ SPRV T P L T S+TT
Sbjct: 4 EGDKKKTPAPGKEQKFNPQSPISTRGRPAPKSVSPRVKTATPTPKPKVLPSTSSKTT 60
>AE014298-2648|AAS65396.1| 349|Drosophila melanogaster CG12348-PF,
isoform F protein.
Length = 349
Score = 28.7 bits (61), Expect = 7.5
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Frame = -3
Query: 282 LFIIIRLQQTNPHFL*YLVIRSFVHQTPTFPRRIT--YSKFFLARTFCIVWF 133
L I+I +T P F Y V + + T + FFL T CI+WF
Sbjct: 239 LSIVIFCLETLPEFKHYKVFNTTTNGTKIEEDEVPDITDPFFLIETLCIIWF 290
>AE014298-2647|AAN09452.1| 304|Drosophila melanogaster CG12348-PA,
isoform A protein.
Length = 304
Score = 28.7 bits (61), Expect = 7.5
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Frame = -3
Query: 282 LFIIIRLQQTNPHFL*YLVIRSFVHQTPTFPRRIT--YSKFFLARTFCIVWF 133
L I+I +T P F Y V + + T + FFL T CI+WF
Sbjct: 194 LSIVIFCLETLPEFKHYKVFNTTTNGTKIEEDEVPDITDPFFLIETLCIIWF 245
>AE014298-2646|AAF48786.3| 655|Drosophila melanogaster CG12348-PE,
isoform E protein.
Length = 655
Score = 28.7 bits (61), Expect = 7.5
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Frame = -3
Query: 282 LFIIIRLQQTNPHFL*YLVIRSFVHQTPTFPRRIT--YSKFFLARTFCIVWF 133
L I+I +T P F Y V + + T + FFL T CI+WF
Sbjct: 239 LSIVIFCLETLPEFKHYKVFNTTTNGTKIEEDEVPDITDPFFLIETLCIIWF 290
>AE014298-2645|AAF48790.2| 643|Drosophila melanogaster CG12348-PC,
isoform C protein.
Length = 643
Score = 28.7 bits (61), Expect = 7.5
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Frame = -3
Query: 282 LFIIIRLQQTNPHFL*YLVIRSFVHQTPTFPRRIT--YSKFFLARTFCIVWF 133
L I+I +T P F Y V + + T + FFL T CI+WF
Sbjct: 227 LSIVIFCLETLPEFKHYKVFNTTTNGTKIEEDEVPDITDPFFLIETLCIIWF 278
>AE014298-2644|AAS65395.1| 616|Drosophila melanogaster CG12348-PG,
isoform G protein.
Length = 616
Score = 28.7 bits (61), Expect = 7.5
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Frame = -3
Query: 282 LFIIIRLQQTNPHFL*YLVIRSFVHQTPTFPRRIT--YSKFFLARTFCIVWF 133
L I+I +T P F Y V + + T + FFL T CI+WF
Sbjct: 239 LSIVIFCLETLPEFKHYKVFNTTTNGTKIEEDEVPDITDPFFLIETLCIIWF 290
>AE014298-2643|AAF48785.3| 616|Drosophila melanogaster CG12348-PB,
isoform B protein.
Length = 616
Score = 28.7 bits (61), Expect = 7.5
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Frame = -3
Query: 282 LFIIIRLQQTNPHFL*YLVIRSFVHQTPTFPRRIT--YSKFFLARTFCIVWF 133
L I+I +T P F Y V + + T + FFL T CI+WF
Sbjct: 239 LSIVIFCLETLPEFKHYKVFNTTTNGTKIEEDEVPDITDPFFLIETLCIIWF 290
>AE014298-2642|AAN09451.1| 571|Drosophila melanogaster CG12348-PD,
isoform D protein.
Length = 571
Score = 28.7 bits (61), Expect = 7.5
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Frame = -3
Query: 282 LFIIIRLQQTNPHFL*YLVIRSFVHQTPTFPRRIT--YSKFFLARTFCIVWF 133
L I+I +T P F Y V + + T + FFL T CI+WF
Sbjct: 194 LSIVIFCLETLPEFKHYKVFNTTTNGTKIEEDEVPDITDPFFLIETLCIIWF 245
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.317 0.132 0.391
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,021,696
Number of Sequences: 53049
Number of extensions: 563311
Number of successful extensions: 1965
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1911
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1965
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2868730650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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