Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc7k22
(665 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81525-1|CAB04256.1| 897|Caenorhabditis elegans Hypothetical pr... 31 0.97
U19615-1|AAB51351.1| 897|Caenorhabditis elegans Nucampholin pro... 31 0.97
AF022981-11|AAG24207.1| 746|Caenorhabditis elegans Hypothetical... 30 1.7
AC006834-10|AAF40005.1| 745|Caenorhabditis elegans Hypothetical... 30 1.7
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 29 3.9
U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone methyl... 29 3.9
U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone methyl... 29 3.9
Z68004-2|CAA91982.1| 677|Caenorhabditis elegans Hypothetical pr... 28 5.2
U97007-6|AAB52296.3| 468|Caenorhabditis elegans Hypothetical pr... 28 5.2
>Z81525-1|CAB04256.1| 897|Caenorhabditis elegans Hypothetical
protein F33A8.1 protein.
Length = 897
Score = 30.7 bits (66), Expect = 0.97
Identities = 29/106 (27%), Positives = 42/106 (39%)
Frame = +1
Query: 109 EDEVNSPVKPDDAESPSKKKLRISNSTRKSWSLMDKRTNYEVLQEMGVSLLEPDDNEQSC 288
E+E S +PD ++ S+K S S R+S + + T QE + E DD +
Sbjct: 21 EEEKESSEQPDTPKTSSEKSASRSQSPRESREV-SQETETSENQE---KIKEKDDGDDQP 76
Query: 289 ELXXXXXXXXXKGTKRKRDIENVNPNTNSCSPITKRSPGPSKAKSP 426
KR E + SP+ RSP S A+SP
Sbjct: 77 GTPNSYRSRETSPAP-KRSKETRESESPEKSPVRSRSPRRSSARSP 121
>U19615-1|AAB51351.1| 897|Caenorhabditis elegans Nucampholin
protein.
Length = 897
Score = 30.7 bits (66), Expect = 0.97
Identities = 29/106 (27%), Positives = 42/106 (39%)
Frame = +1
Query: 109 EDEVNSPVKPDDAESPSKKKLRISNSTRKSWSLMDKRTNYEVLQEMGVSLLEPDDNEQSC 288
E+E S +PD ++ S+K S S R+S + + T QE + E DD +
Sbjct: 21 EEEKESSEQPDTPKTSSEKSASRSQSPRESREV-SQETETSENQE---KIKEKDDGDDQP 76
Query: 289 ELXXXXXXXXXKGTKRKRDIENVNPNTNSCSPITKRSPGPSKAKSP 426
KR E + SP+ RSP S A+SP
Sbjct: 77 GTPNSYRSRETSPAP-KRSKETRESESPEKSPVRSRSPRRSSARSP 121
>AF022981-11|AAG24207.1| 746|Caenorhabditis elegans Hypothetical
protein W03F9.4 protein.
Length = 746
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = -2
Query: 295 PVHRIVHYHQAPAN*PPFLVIPRNSFVCPSNSNF 194
P H++V Y +A N P L P F CP SN+
Sbjct: 662 PQHQMVEYAKA-LNKEPSLFWPAGGFACPDGSNY 694
>AC006834-10|AAF40005.1| 745|Caenorhabditis elegans Hypothetical
protein ZK973.1 protein.
Length = 745
Score = 29.9 bits (64), Expect = 1.7
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +1
Query: 133 KPDDAES-PSKKKLRISNSTRKSWSLMDKRTNYEVLQEMGVSLL 261
+PDDAE P KKK + +ST K W+ D+ + G SLL
Sbjct: 575 RPDDAEDGPPKKKFK-KSSTSKEWNPFDETIVHPDDYRTGESLL 617
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical
protein K06A9.1b protein.
Length = 2232
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +1
Query: 349 ENVNPNTNSCSPITKRSPGPSKAKSP 426
+N NP+T+S S + +SP PS++ SP
Sbjct: 853 QNPNPSTSSGSSMITQSPYPSQSTSP 878
>U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone
methyltransferase-likeprotein 1, isoform b protein.
Length = 1590
Score = 28.7 bits (61), Expect = 3.9
Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 2/77 (2%)
Frame = +1
Query: 334 RKRDIENVNPNTNSCSPITKR--SPGPSKAKSPRVHTGKPLQQTDSETTLVEGIAFDEET 507
++R ++ + N SPI R SPG K S + ++ D ++ I D E
Sbjct: 1149 KRRKLDEHDNNHRQRSPIRDRHTSPGGEKTPSSNNSGERNYKRLDIRGARIKTIKEDLEA 1208
Query: 508 PLAQCISAYVPREQRAH 558
A +A VP E +A+
Sbjct: 1209 AAAAAAAAAVPSEVQAY 1225
>U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone
methyltransferase-likeprotein 1, isoform a protein.
Length = 1604
Score = 28.7 bits (61), Expect = 3.9
Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 2/77 (2%)
Frame = +1
Query: 334 RKRDIENVNPNTNSCSPITKR--SPGPSKAKSPRVHTGKPLQQTDSETTLVEGIAFDEET 507
++R ++ + N SPI R SPG K S + ++ D ++ I D E
Sbjct: 1163 KRRKLDEHDNNHRQRSPIRDRHTSPGGEKTPSSNNSGERNYKRLDIRGARIKTIKEDLEA 1222
Query: 508 PLAQCISAYVPREQRAH 558
A +A VP E +A+
Sbjct: 1223 AAAAAAAAAVPSEVQAY 1239
>Z68004-2|CAA91982.1| 677|Caenorhabditis elegans Hypothetical
protein F47B10.2 protein.
Length = 677
Score = 28.3 bits (60), Expect = 5.2
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +1
Query: 127 PVKPDDA-ESPSKKKLRISNSTRKSWSLMDKRTNYEVLQEMGVSLLEPDD 273
P KPDD + +KK + R L D +EV + +G SLL+P+D
Sbjct: 15 PCKPDDTIHAVAKKSVEKLRRLRPKLPLADDY--FEVRRTVGNSLLDPED 62
>U97007-6|AAB52296.3| 468|Caenorhabditis elegans Hypothetical
protein ZC196.4 protein.
Length = 468
Score = 28.3 bits (60), Expect = 5.2
Identities = 16/61 (26%), Positives = 27/61 (44%)
Frame = +1
Query: 109 EDEVNSPVKPDDAESPSKKKLRISNSTRKSWSLMDKRTNYEVLQEMGVSLLEPDDNEQSC 288
E+ + KPD E + + N + + + Y++L E L E DD+E+ C
Sbjct: 148 ENTIEDDKKPDFCEYSNICDEFLENYQKMENEHNEMTSKYQILGENKSELKEQDDSEKEC 207
Query: 289 E 291
E
Sbjct: 208 E 208
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.317 0.132 0.391
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,385,676
Number of Sequences: 27780
Number of extensions: 289481
Number of successful extensions: 1006
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 949
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1001
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1497472076
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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