Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc7k21
         (302 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A4X2R9 Cluster: Putative uncharacterized protein; n=1; ...    30   8.8  
UniRef50_Q7R9S0 Cluster: Putative uncharacterized protein PY0679...    30   8.8  
UniRef50_A5K430 Cluster: DNA repair metallo-beta-lactamase prote...    30   8.8  

>UniRef50_A4X2R9 Cluster: Putative uncharacterized protein; n=1;
           Salinispora tropica CNB-440|Rep: Putative
           uncharacterized protein - Salinispora tropica CNB-440
          Length = 123

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 10/32 (31%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
 Frame = +2

Query: 74  VCLVNVMSFYPPGWDDPVIPRD-HNICDINDV 166
           +C  +V ++ PP W DP +P+  H   +++D+
Sbjct: 49  LCFQSVANYQPPQWPDPALPQQAHLDVEVDDI 80


>UniRef50_Q7R9S0 Cluster: Putative uncharacterized protein PY06791;
           n=3; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY06791 - Plasmodium yoelii yoelii
          Length = 615

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = -2

Query: 103 VKRHNIHQTHRVAVFIRNHSRSVINNDNAI*KKK 2
           V   NI   H + +   N S+  INN+N + KKK
Sbjct: 380 VHHDNIKNAHTIFLLKSNQSKECINNENGVIKKK 413


>UniRef50_A5K430 Cluster: DNA repair metallo-beta-lactamase protein,
           putative; n=5; Plasmodium|Rep: DNA repair
           metallo-beta-lactamase protein, putative - Plasmodium
           vivax
          Length = 769

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 9/28 (32%), Positives = 21/28 (75%)
 Frame = -2

Query: 127 YGIVPSRWVKRHNIHQTHRVAVFIRNHS 44
           Y I+P+ WVK+++ +Q + +++F+  +S
Sbjct: 631 YYIIPTGWVKKYSFYQKNEISIFLIPYS 658


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 211,908,164
Number of Sequences: 1657284
Number of extensions: 3227728
Number of successful extensions: 7121
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7016
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7121
length of database: 575,637,011
effective HSP length: 77
effective length of database: 448,026,143
effective search space used: 10304601289
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)