Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc7j10
(689 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z22175-2|CAA80131.2| 520|Caenorhabditis elegans Hypothetical pr... 53 2e-07
Z11115-20|CAA77460.2| 520|Caenorhabditis elegans Hypothetical p... 53 2e-07
AL161712-10|CAC35900.1| 533|Caenorhabditis elegans Hypothetical... 33 0.19
AC006638-8|AAK85487.2| 644|Caenorhabditis elegans Hypothetical ... 32 0.34
AC024793-1|AAF60692.2| 649|Caenorhabditis elegans Atm (ataxia t... 31 1.0
Z66495-4|CAA91271.1| 954|Caenorhabditis elegans Hypothetical pr... 29 4.1
U37548-10|AAR30210.1| 1418|Caenorhabditis elegans Calcium channe... 29 4.1
U37548-9|AAR25651.1| 1852|Caenorhabditis elegans Calcium channel... 29 4.1
U37548-8|AAM51534.1| 1837|Caenorhabditis elegans Calcium channel... 29 4.1
U37548-7|AAR25652.1| 1885|Caenorhabditis elegans Calcium channel... 29 4.1
U37548-6|AAR25653.1| 1844|Caenorhabditis elegans Calcium channel... 29 4.1
AY322480-1|AAP84337.1| 1844|Caenorhabditis elegans T-type voltag... 29 4.1
AY313900-1|AAP79883.1| 1852|Caenorhabditis elegans T-type calciu... 29 4.1
AY313899-1|AAP79882.1| 1885|Caenorhabditis elegans T-type calciu... 29 4.1
AY313898-1|AAP79881.1| 1837|Caenorhabditis elegans T-type calciu... 29 4.1
AF368920-1|AAK53427.1| 1837|Caenorhabditis elegans voltage-depen... 29 4.1
Z99278-4|CAB16492.1| 871|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z99278-3|CAB16493.1| 867|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z69788-8|CAA93644.3| 483|Caenorhabditis elegans Hypothetical pr... 28 7.2
U40802-6|AAV28320.1| 330|Caenorhabditis elegans Hypothetical pr... 27 9.6
>Z22175-2|CAA80131.2| 520|Caenorhabditis elegans Hypothetical
protein ZK637.1 protein.
Length = 520
Score = 52.8 bits (121), Expect = 2e-07
Identities = 35/129 (27%), Positives = 53/129 (41%)
Frame = +2
Query: 284 SKDRVQRAPFETALHHAGYGCFQWLLLLSCGAVYAVCALSTTTLSFVLPATKNDFELSSS 463
S D + + A+ G+G FQ L + G + A+ LS + PA ++ +SS
Sbjct: 60 SPDSEKTFTVDEAVEALGFGRFQLKLSILTGMAWMADAMEMMLLSLISPALACEWGISSV 119
Query: 464 DKGRLTATPLIGMCVGSYFWGNLADARGRKXXXXXXXXXXXXXXXXSSVVQSFSGFLACR 643
+ +T GM + S FWG + D GR+ S + F L R
Sbjct: 120 QQALVTTCVFSGMMLSSTFWGKICDRFGRRKGLTFSTLVACIMGVISGMSPHFYVLLFFR 179
Query: 644 FFSGFGIIG 670
+GFGI G
Sbjct: 180 GLTGFGIGG 188
>Z11115-20|CAA77460.2| 520|Caenorhabditis elegans Hypothetical
protein ZK637.1 protein.
Length = 520
Score = 52.8 bits (121), Expect = 2e-07
Identities = 35/129 (27%), Positives = 53/129 (41%)
Frame = +2
Query: 284 SKDRVQRAPFETALHHAGYGCFQWLLLLSCGAVYAVCALSTTTLSFVLPATKNDFELSSS 463
S D + + A+ G+G FQ L + G + A+ LS + PA ++ +SS
Sbjct: 60 SPDSEKTFTVDEAVEALGFGRFQLKLSILTGMAWMADAMEMMLLSLISPALACEWGISSV 119
Query: 464 DKGRLTATPLIGMCVGSYFWGNLADARGRKXXXXXXXXXXXXXXXXSSVVQSFSGFLACR 643
+ +T GM + S FWG + D GR+ S + F L R
Sbjct: 120 QQALVTTCVFSGMMLSSTFWGKICDRFGRRKGLTFSTLVACIMGVISGMSPHFYVLLFFR 179
Query: 644 FFSGFGIIG 670
+GFGI G
Sbjct: 180 GLTGFGIGG 188
>AL161712-10|CAC35900.1| 533|Caenorhabditis elegans Hypothetical
protein Y66D12A.13 protein.
Length = 533
Score = 33.1 bits (72), Expect = 0.19
Identities = 21/66 (31%), Positives = 27/66 (40%)
Frame = +2
Query: 479 TATPLIGMCVGSYFWGNLADARGRKXXXXXXXXXXXXXXXXSSVVQSFSGFLACRFFSGF 658
T + +IG+ +GS G L+D GRK SS S F+ RFF G
Sbjct: 118 TTSQMIGIMLGSAIAGQLSDLYGRKKITLLFLCMMLFFSTSSSFSSSIEVFIIVRFFIGI 177
Query: 659 GIIGAT 676
G T
Sbjct: 178 CCGGLT 183
>AC006638-8|AAK85487.2| 644|Caenorhabditis elegans Hypothetical
protein F41G4.7 protein.
Length = 644
Score = 32.3 bits (70), Expect = 0.34
Identities = 27/97 (27%), Positives = 40/97 (41%)
Frame = -3
Query: 684 MRPVAPMIPNPEKNLQARNPEKDCTTLDRNAARASKSRAPMMAIFRPRASAKLPQKYEPT 505
MR +P N RNP +D++ A + M+ RA +LP YE +
Sbjct: 98 MRTFSPEAARSSSNSSDRNPR-----MDQDFELAMELACEEMSAIHARA--QLPMNYEAS 150
Query: 504 HIPMSGVAVRRPLSDDDSSKSFLVAGSTKLSVVVLSA 394
H P +P S+ D KS AGS ++ + A
Sbjct: 151 HPP------EQPSSESDEDKSVSSAGSGSITTAAVLA 181
>AC024793-1|AAF60692.2| 649|Caenorhabditis elegans Atm (ataxia
telangectasia mutated)family protein 1 protein.
Length = 649
Score = 30.7 bits (66), Expect = 1.0
Identities = 18/58 (31%), Positives = 29/58 (50%)
Frame = -1
Query: 203 YHTKIVFLVTAAIHSVCLSALSHLY*LTECKILKL*FDSRTIF*RHLSRSECRVSTER 30
++ KI+ V +HSVC+ LS L E + ++ + T F + + S CR S R
Sbjct: 3 HYKKIIHQVLLKLHSVCIGQLSKLEEYRETRTYRMKQQAVTAFEQQIQNS-CRTSLAR 59
>Z66495-4|CAA91271.1| 954|Caenorhabditis elegans Hypothetical
protein C36A4.5 protein.
Length = 954
Score = 28.7 bits (61), Expect = 4.1
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = -3
Query: 687 KMRPVAPMIPNPEKNLQARNPEKD-CTTLDRNAARASKSRAPMMAIFRPRASA 532
+ RP P + P + L +R P C T R+AA A+++ P A P+A++
Sbjct: 333 RTRPAIPAVSAP-RALTSRAPTGPACPTTTRSAAPATRTAVPPRATAPPKAAS 384
>U37548-10|AAR30210.1| 1418|Caenorhabditis elegans Calcium channel,
alpha subunitprotein 1, isoform f protein.
Length = 1418
Score = 28.7 bits (61), Expect = 4.1
Identities = 20/79 (25%), Positives = 38/79 (48%)
Frame = -2
Query: 538 VRQVTPEVRADAHSDERRGGEAALVGRRQLEVILGGGQHEAERGRAECADGVHGAAGQQQ 359
+RQ PE+R+ + GG +++GRR + + Q ++ R R E + + G+ +
Sbjct: 2 LRQPVPELRSFQSLSKYAGGPRSVLGRRTSAITVNRRQSQSTR-RHEDVEAL-GSIEGSK 59
Query: 358 QPLEASVTGVMQRGLEGRP 302
+ L+ S G + E P
Sbjct: 60 ETLQLSEHGRLASSSEASP 78
>U37548-9|AAR25651.1| 1852|Caenorhabditis elegans Calcium channel,
alpha subunitprotein 1, isoform c protein.
Length = 1852
Score = 28.7 bits (61), Expect = 4.1
Identities = 20/79 (25%), Positives = 38/79 (48%)
Frame = -2
Query: 538 VRQVTPEVRADAHSDERRGGEAALVGRRQLEVILGGGQHEAERGRAECADGVHGAAGQQQ 359
+RQ PE+R+ + GG +++GRR + + Q ++ R R E + + G+ +
Sbjct: 2 LRQPVPELRSFQSLSKYAGGPRSVLGRRTSAITVNRRQSQSTR-RHEDVEAL-GSIEGSK 59
Query: 358 QPLEASVTGVMQRGLEGRP 302
+ L+ S G + E P
Sbjct: 60 ETLQLSEHGRLASSSEASP 78
>U37548-8|AAM51534.1| 1837|Caenorhabditis elegans Calcium channel,
alpha subunitprotein 1, isoform a protein.
Length = 1837
Score = 28.7 bits (61), Expect = 4.1
Identities = 20/79 (25%), Positives = 38/79 (48%)
Frame = -2
Query: 538 VRQVTPEVRADAHSDERRGGEAALVGRRQLEVILGGGQHEAERGRAECADGVHGAAGQQQ 359
+RQ PE+R+ + GG +++GRR + + Q ++ R R E + + G+ +
Sbjct: 2 LRQPVPELRSFQSLSKYAGGPRSVLGRRTSAITVNRRQSQSTR-RHEDVEAL-GSIEGSK 59
Query: 358 QPLEASVTGVMQRGLEGRP 302
+ L+ S G + E P
Sbjct: 60 ETLQLSEHGRLASSSEASP 78
>U37548-7|AAR25652.1| 1885|Caenorhabditis elegans Calcium channel,
alpha subunitprotein 1, isoform d protein.
Length = 1885
Score = 28.7 bits (61), Expect = 4.1
Identities = 20/79 (25%), Positives = 38/79 (48%)
Frame = -2
Query: 538 VRQVTPEVRADAHSDERRGGEAALVGRRQLEVILGGGQHEAERGRAECADGVHGAAGQQQ 359
+RQ PE+R+ + GG +++GRR + + Q ++ R R E + + G+ +
Sbjct: 2 LRQPVPELRSFQSLSKYAGGPRSVLGRRTSAITVNRRQSQSTR-RHEDVEAL-GSIEGSK 59
Query: 358 QPLEASVTGVMQRGLEGRP 302
+ L+ S G + E P
Sbjct: 60 ETLQLSEHGRLASSSEASP 78
>U37548-6|AAR25653.1| 1844|Caenorhabditis elegans Calcium channel,
alpha subunitprotein 1, isoform e protein.
Length = 1844
Score = 28.7 bits (61), Expect = 4.1
Identities = 20/79 (25%), Positives = 38/79 (48%)
Frame = -2
Query: 538 VRQVTPEVRADAHSDERRGGEAALVGRRQLEVILGGGQHEAERGRAECADGVHGAAGQQQ 359
+RQ PE+R+ + GG +++GRR + + Q ++ R R E + + G+ +
Sbjct: 2 LRQPVPELRSFQSLSKYAGGPRSVLGRRTSAITVNRRQSQSTR-RHEDVEAL-GSIEGSK 59
Query: 358 QPLEASVTGVMQRGLEGRP 302
+ L+ S G + E P
Sbjct: 60 ETLQLSEHGRLASSSEASP 78
>AY322480-1|AAP84337.1| 1844|Caenorhabditis elegans T-type voltage
sensitive calciumchannel alpha1 subunit isoform D
protein.
Length = 1844
Score = 28.7 bits (61), Expect = 4.1
Identities = 20/79 (25%), Positives = 38/79 (48%)
Frame = -2
Query: 538 VRQVTPEVRADAHSDERRGGEAALVGRRQLEVILGGGQHEAERGRAECADGVHGAAGQQQ 359
+RQ PE+R+ + GG +++GRR + + Q ++ R R E + + G+ +
Sbjct: 2 LRQPVPELRSFQSLSKYAGGPRSVLGRRTSAITVNRRQSQSTR-RHEDVEAL-GSIEGSK 59
Query: 358 QPLEASVTGVMQRGLEGRP 302
+ L+ S G + E P
Sbjct: 60 ETLQLSEHGRLASSSEASP 78
>AY313900-1|AAP79883.1| 1852|Caenorhabditis elegans T-type calcium
channel alpha1 subunitisoform C protein.
Length = 1852
Score = 28.7 bits (61), Expect = 4.1
Identities = 20/79 (25%), Positives = 38/79 (48%)
Frame = -2
Query: 538 VRQVTPEVRADAHSDERRGGEAALVGRRQLEVILGGGQHEAERGRAECADGVHGAAGQQQ 359
+RQ PE+R+ + GG +++GRR + + Q ++ R R E + + G+ +
Sbjct: 2 LRQPVPELRSFQSLSKYAGGPRSVLGRRTSAITVNRRQSQSTR-RHEDVEAL-GSIEGSK 59
Query: 358 QPLEASVTGVMQRGLEGRP 302
+ L+ S G + E P
Sbjct: 60 ETLQLSEHGRLASSSEASP 78
>AY313899-1|AAP79882.1| 1885|Caenorhabditis elegans T-type calcium
channel alpha1 subunitisoform B protein.
Length = 1885
Score = 28.7 bits (61), Expect = 4.1
Identities = 20/79 (25%), Positives = 38/79 (48%)
Frame = -2
Query: 538 VRQVTPEVRADAHSDERRGGEAALVGRRQLEVILGGGQHEAERGRAECADGVHGAAGQQQ 359
+RQ PE+R+ + GG +++GRR + + Q ++ R R E + + G+ +
Sbjct: 2 LRQPVPELRSFQSLSKYAGGPRSVLGRRTSAITVNRRQSQSTR-RHEDVEAL-GSIEGSK 59
Query: 358 QPLEASVTGVMQRGLEGRP 302
+ L+ S G + E P
Sbjct: 60 ETLQLSEHGRLASSSEASP 78
>AY313898-1|AAP79881.1| 1837|Caenorhabditis elegans T-type calcium
channel alpha1 subunitisoform A protein.
Length = 1837
Score = 28.7 bits (61), Expect = 4.1
Identities = 20/79 (25%), Positives = 38/79 (48%)
Frame = -2
Query: 538 VRQVTPEVRADAHSDERRGGEAALVGRRQLEVILGGGQHEAERGRAECADGVHGAAGQQQ 359
+RQ PE+R+ + GG +++GRR + + Q ++ R R E + + G+ +
Sbjct: 2 LRQPVPELRSFQSLSKYAGGPRSVLGRRTSAITVNRRQSQSTR-RHEDVEAL-GSIEGSK 59
Query: 358 QPLEASVTGVMQRGLEGRP 302
+ L+ S G + E P
Sbjct: 60 ETLQLSEHGRLASSSEASP 78
>AF368920-1|AAK53427.1| 1837|Caenorhabditis elegans
voltage-dependent calcium channelalpha13 subunit
protein.
Length = 1837
Score = 28.7 bits (61), Expect = 4.1
Identities = 20/79 (25%), Positives = 38/79 (48%)
Frame = -2
Query: 538 VRQVTPEVRADAHSDERRGGEAALVGRRQLEVILGGGQHEAERGRAECADGVHGAAGQQQ 359
+RQ PE+R+ + GG +++GRR + + Q ++ R R E + + G+ +
Sbjct: 2 LRQPVPELRSFQSLSKYAGGPRSVLGRRTSAITVNRRQSQSTR-RHEDVEAL-GSIEGSK 59
Query: 358 QPLEASVTGVMQRGLEGRP 302
+ L+ S G + E P
Sbjct: 60 ETLQLSEHGRLASSSEASP 78
>Z99278-4|CAB16492.1| 871|Caenorhabditis elegans Hypothetical
protein Y53C12B.3b protein.
Length = 871
Score = 28.3 bits (60), Expect = 5.5
Identities = 20/87 (22%), Positives = 36/87 (41%)
Frame = -3
Query: 684 MRPVAPMIPNPEKNLQARNPEKDCTTLDRNAARASKSRAPMMAIFRPRASAKLPQKYEPT 505
++PV+ +P K + KD T N+ S+S P P+ K+ Q+
Sbjct: 611 LQPVSSRAGSPSKQILQLVESKDDQTSTENSESPSRSSTPKHRKKTPKKDFKVDQE-ASI 669
Query: 504 HIPMSGVAVRRPLSDDDSSKSFLVAGS 424
+ ++ P +DD SK + + S
Sbjct: 670 EATKTEISEENPKTDDIQSKDDVTSKS 696
>Z99278-3|CAB16493.1| 867|Caenorhabditis elegans Hypothetical
protein Y53C12B.3a protein.
Length = 867
Score = 28.3 bits (60), Expect = 5.5
Identities = 20/87 (22%), Positives = 36/87 (41%)
Frame = -3
Query: 684 MRPVAPMIPNPEKNLQARNPEKDCTTLDRNAARASKSRAPMMAIFRPRASAKLPQKYEPT 505
++PV+ +P K + KD T N+ S+S P P+ K+ Q+
Sbjct: 608 LQPVSSRAGSPSKQILQLVESKDDQTSTENSESPSRSSTPKHRKKTPKKDFKVDQE-ASI 666
Query: 504 HIPMSGVAVRRPLSDDDSSKSFLVAGS 424
+ ++ P +DD SK + + S
Sbjct: 667 EATKTEISEENPKTDDIQSKDDVTSKS 693
>Z69788-8|CAA93644.3| 483|Caenorhabditis elegans Hypothetical
protein F09A5.1 protein.
Length = 483
Score = 27.9 bits (59), Expect = 7.2
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +2
Query: 410 TLSFVLPATKNDFELSSSDKGRLTATPLIGMCVGSYFWGNLADARGRK 553
T++ VLP ++ + ++ S G + LI +GS G L D RK
Sbjct: 27 TIAGVLPDVQSYYNINDSMGGMIQTVFLISFMIGSPICGYLGDRFNRK 74
>U40802-6|AAV28320.1| 330|Caenorhabditis elegans Hypothetical
protein ZC477.3a protein.
Length = 330
Score = 27.5 bits (58), Expect = 9.6
Identities = 26/102 (25%), Positives = 44/102 (43%), Gaps = 1/102 (0%)
Frame = -3
Query: 675 VAPMIPNPEKNLQ-ARNPEKDCTTLDRNAARASKSRAPMMAIFRPRASAKLPQKYEPTHI 499
V P PE +++ + +K TT+ AR SK + + + A+ +PT +
Sbjct: 224 VKPTDALPESDVKKVSDLDKLLTTIREENARLSKEMRELSRLAQLEAALDA----DPTSV 279
Query: 498 PMSGVAVRRPLSDDDSSKSFLVAGSTKLSVVVLSAQTAYTAP 373
G + R L + + + T L+VVV+ A TAP
Sbjct: 280 VYVGSDMERLLEQTEKNIESKMKLRTLLTVVVIYTAVAVTAP 321
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,505,792
Number of Sequences: 27780
Number of extensions: 286166
Number of successful extensions: 913
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 867
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 911
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1581836700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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