Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc7i20
(605 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0339 + 23287620-23287676,23287784-23287849,23287937-232880... 186 1e-47
05_07_0067 + 27463703-27463705,27464309-27464365,27464779-274648... 138 3e-33
06_03_1193 - 28298656-28298754,28299303-28299377,28299456-282995... 96 2e-20
06_03_0477 - 21250811-21250981,21251261-21251374,21251447-212516... 95 5e-20
04_04_0729 + 27612106-27612195,27612284-27612370,27612469-276125... 76 2e-14
02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949 74 8e-14
06_03_0353 + 19810945-19810975,19811308-19811369,19811741-198118... 73 1e-13
10_08_0620 - 19321612-19323237 72 3e-13
02_02_0253 - 8325437-8325628,8325705-8325779,8325933-8326037,832... 72 4e-13
05_01_0337 - 2658647-2658722,2658797-2658915,2658995-2659102,265... 65 5e-11
03_06_0362 + 33379489-33379624,33380161-33380423,33380524-333806... 54 7e-08
06_01_0097 - 810283-810296,810398-810521,810974-811066,811144-81... 42 3e-04
02_01_0024 + 159595-159801,159892-160017,160201-160338,160431-16... 42 4e-04
01_01_0004 + 15599-15976,16383-16474,16558-17258,17501-17571,179... 28 6.6
>03_05_0339 +
23287620-23287676,23287784-23287849,23287937-23288048,
23288240-23288368,23288795-23288866,23289245-23289360,
23289494-23289570,23289788-23290273,23290373-23290688,
23290769-23290915
Length = 525
Score = 186 bits (453), Expect = 1e-47
Identities = 102/184 (55%), Positives = 124/184 (67%)
Frame = +3
Query: 54 RIXXNXAQXXKAEVARMXXFIXAIAIXDLVXXTLGPXGMDKILXSCGRNSGQVEXTNDGA 233
R+ + A K E ARM FI A+AI DLV TLGP GMDKIL S GR V TNDGA
Sbjct: 3 RVLKDDAVEEKGERARMAAFIGAMAIADLVKTTLGPKGMDKILQSTGRGRS-VTVTNDGA 61
Query: 234 TILXSIGVDNPAAKXLXDMSXVXXEEXGDGTTSVTVXXXXXXXXXXKLIEQKLHPQTIIA 413
TIL S+ +DNPAAK L D+S V +E GDGTTSV V KL+ K+HP TIIA
Sbjct: 62 TILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVNMKIHPMTIIA 121
Query: 414 GWRIASDAAKQALAEASFDHQKNLNEASLRVDLENIARTTLSSKILSNHKEHFTKLAVDA 593
G+R+A + A+ AL E + D+++N+++ R DL NIA TTLSSKILS KE+F +LAVDA
Sbjct: 122 GYRMAVECARNALLERTMDNKENIDK--FRSDLMNIAMTTLSSKILSQDKEYFAELAVDA 179
Query: 594 VLRL 605
VLRL
Sbjct: 180 VLRL 183
>05_07_0067 +
27463703-27463705,27464309-27464365,27464779-27464844,
27464985-27465096,27465281-27465409,27466076-27466191,
27466364-27466440,27466678-27467163,27467255-27467570,
27467618-27467797
Length = 513
Score = 138 bits (334), Expect = 3e-33
Identities = 91/184 (49%), Positives = 103/184 (55%)
Frame = +3
Query: 54 RIXXNXAQXXKAEVARMXXFIXAIAIXDLVXXTLGPXGMDKILXSCGRNSGQVEXTNDGA 233
R+ + A K E ARM F+ +AI DLV TLGP GMDKIL S GR V TNDGA
Sbjct: 4 RLLKDDATEEKGERARMASFVGGMAISDLVKTTLGPKGMDKILQSTGRGRS-VTVTNDGA 62
Query: 234 TILXSIGVDNPAAKXLXDMSXVXXEEXGDGTTSVTVXXXXXXXXXXKLIEQKLHPQTIIA 413
TIL S+ +DNPAAK L D+S V +E GDGTTSV V KL+ K+HP TIIA
Sbjct: 63 TILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVNMKIHPMTIIA 122
Query: 414 GWRIASDAAKQALAEASFDHQKNLNEASLRVDLENIARTTLSSKILSNHKEHFTKLAVDA 593
+ SD L NIA TTLSSKILS KE+F LAVDA
Sbjct: 123 D-KFRSD-------------------------LMNIAMTTLSSKILSQDKEYFAGLAVDA 156
Query: 594 VLRL 605
VLRL
Sbjct: 157 VLRL 160
>06_03_1193 -
28298656-28298754,28299303-28299377,28299456-28299544,
28299679-28299760,28300385-28300474,28300557-28300655,
28300733-28300852,28300968-28301084,28301174-28301309,
28301415-28301584,28301744-28301947,28302032-28302157,
28302841-28303101,28303215-28303229
Length = 560
Score = 95.9 bits (228), Expect = 2e-20
Identities = 58/160 (36%), Positives = 85/160 (53%), Gaps = 1/160 (0%)
Frame = +3
Query: 129 IXDLVXXTLGPXGMDKILXSCGRNSGQVEXTNDGATILXSIGVDNPAAKXLXDMSXVXXE 308
+ D V TLGP GMDK++ + G +NDGATI+ + + +PAAK L D++
Sbjct: 35 VADTVRTTLGPRGMDKLIHD---DKGGTTISNDGATIMRLLDIIHPAAKILVDIAKSQDS 91
Query: 309 EXGDGTTSVTVXXXXXXXXXXKLIEQKLHPQTIIAGWRIASDAAKQALAE-ASFDHQKNL 485
E GDGTT+V + IE +HP ++I +R A A + + + A+ K+L
Sbjct: 92 EVGDGTTTVVLLAAEFLKEAKPYIEDGVHPHSLIRSYRTAGHLAIEKVKDLATSIEGKSL 151
Query: 486 NEASLRVDLENIARTTLSSKILSNHKEHFTKLAVDAVLRL 605
E + L A TTLSSK++ KE F + VDAVL +
Sbjct: 152 EEK--KELLAKCAATTLSSKLIGGEKEFFASMVVDAVLAI 189
>06_03_0477 -
21250811-21250981,21251261-21251374,21251447-21251613,
21252051-21252153,21252315-21252367,21252438-21252570,
21252835-21253183,21253685-21254003,21254519-21254717
Length = 535
Score = 94.7 bits (225), Expect = 5e-20
Identities = 61/158 (38%), Positives = 83/158 (52%)
Frame = +3
Query: 126 AIXDLVXXTLGPXGMDKILXSCGRNSGQVEXTNDGATILXSIGVDNPAAKXLXDMSXVXX 305
A+ ++ +LGP GMDK+L S G V TNDGATIL + VDN AK + ++S
Sbjct: 39 AVARILRTSLGPKGMDKMLQS---PDGDVTITNDGATILEQMDVDNQIAKLMVELSCSQD 95
Query: 306 EEXGDGTTSVTVXXXXXXXXXXKLIEQKLHPQTIIAGWRIASDAAKQALAEASFDHQKNL 485
E GDGTT V V KL+E+ +HP I G+ +AS A L S H+
Sbjct: 96 YEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYELASRIAFDHLEHIS--HKFEF 153
Query: 486 NEASLRVDLENIARTTLSSKILSNHKEHFTKLAVDAVL 599
+ ++ L TTLSSKI++ K ++AV AVL
Sbjct: 154 SATNIE-PLVQTCMTTLSSKIVNRCKRTLAEIAVKAVL 190
>04_04_0729 +
27612106-27612195,27612284-27612370,27612469-27612528,
27612554-27612688,27612769-27612864,27613149-27613214,
27613647-27613864,27614093-27614189,27614605-27614691,
27614892-27615026,27615121-27615225,27615717-27615845,
27615925-27616028,27616598-27616688,27616774-27616857
Length = 527
Score = 76.2 bits (179), Expect = 2e-14
Identities = 52/155 (33%), Positives = 81/155 (52%), Gaps = 24/155 (15%)
Frame = +3
Query: 204 GQVEXTNDGATILXSIGVDNPAAKXLXDMSXVXXEEXGDGTTSVTVXXXXXXXXXXKLIE 383
G V TNDGATIL + V++PAAK L +++ + E GDGTTSV + L+
Sbjct: 7 GDVTITNDGATILRMLEVEHPAAKVLVELAELQDREVGDGTTSVVIIAAELLKRGNDLVR 66
Query: 384 QKLHPQTIIAGWRIASDAAKQALAEASFDH----------QKNLNEA--------SLRVD 509
K+HP +II+G+R+ + + A+ H Q + EA +++VD
Sbjct: 67 NKIHPTSIISGYRLQYNFRFKTNVPAANPHCLTCFTIIYYQLAMREACKYVEEKLAVKVD 126
Query: 510 ------LENIARTTLSSKILSNHKEHFTKLAVDAV 596
L N A+T++SSK++++ + F L VDAV
Sbjct: 127 KLGKDSLINCAKTSMSSKLINSDSDFFANLVVDAV 161
>02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949
Length = 550
Score = 74.1 bits (174), Expect = 8e-14
Identities = 58/161 (36%), Positives = 78/161 (48%), Gaps = 1/161 (0%)
Frame = +3
Query: 120 AIAIXDLVXXTLGPXGMDKILXSCGRNSGQVEXTNDGATILXSIGVDNPAAKXLXDMSXV 299
A A+ D V +LGP GMDK++ S +V TNDGATIL + + PAA+ L ++S
Sbjct: 35 ARAVADAVRTSLGPRGMDKMISS---GEQEVIITNDGATILSRMSLLQPAARMLAELSRS 91
Query: 300 XXEEXGDGTTSVTVXXXXXXXXXXKLIEQKLHPQTII-AGWRIASDAAKQALAEASFDHQ 476
GDGTT+V V L+ HP A R+A+ A + A A
Sbjct: 92 QDAAAGDGTTTVVVLAGSLLRRAQSLLSAGAHPTAAADALHRLATRAVEVLHAMAI---- 147
Query: 477 KNLNEASLRVDLENIARTTLSSKILSNHKEHFTKLAVDAVL 599
E S R L A T L+SK++S + + LAVDA L
Sbjct: 148 --PIELSDRDSLVKSASTALNSKVVSQYSSLLSPLAVDAAL 186
>06_03_0353 +
19810945-19810975,19811308-19811369,19811741-19811813,
19813292-19813359,19813496-19813565,19813908-19813976,
19814065-19814136,19814247-19814320,19814420-19814697,
19814804-19815188,19815268-19815393,19815583-19815687,
19815986-19815994,19817040-19817114,19817202-19817390
Length = 561
Score = 73.3 bits (172), Expect = 1e-13
Identities = 49/158 (31%), Positives = 73/158 (46%)
Frame = +3
Query: 120 AIAIXDLVXXTLGPXGMDKILXSCGRNSGQVEXTNDGATILXSIGVDNPAAKXLXDMSXV 299
A A+ D++ TLGP M K+L SG + TNDG IL I + +PAAK + ++S
Sbjct: 30 AKAVADIIRTTLGPRSMLKMLLDA---SGGIVVTNDGNAILREIDIAHPAAKSMIELSRT 86
Query: 300 XXEEXGDGTTSVTVXXXXXXXXXXKLIEQKLHPQTIIAGWRIASDAAKQALAEASFDHQK 479
EE GDGTTSV V I++ HP I + A + A L + +
Sbjct: 87 QDEEVGDGTTSVIVLAGEMLHVAEAFIDKHYHPTVICRAYTKALEDALAVLDKIAMHVDV 146
Query: 480 NLNEASLRVDLENIARTTLSSKILSNHKEHFTKLAVDA 593
N A L + ++++ +K + LA+DA
Sbjct: 147 NDRAAML-----GLVKSSIGTKFTGQFGDLIADLAIDA 179
>10_08_0620 - 19321612-19323237
Length = 541
Score = 72.1 bits (169), Expect = 3e-13
Identities = 53/159 (33%), Positives = 72/159 (45%), Gaps = 1/159 (0%)
Frame = +3
Query: 126 AIXDLVXXTLGPXGMDKILXSCGRNSGQ-VEXTNDGATILXSIGVDNPAAKXLXDMSXVX 302
A+ +LGP GMDK++ S Q V TNDGATIL + + PAA+ L D+S
Sbjct: 37 AVAAAARTSLGPRGMDKMISSSSSGGDQAVIITNDGATILSRMPLLQPAARMLADLSRSQ 96
Query: 303 XEEXGDGTTSVTVXXXXXXXXXXKLIEQKLHPQTIIAGWRIASDAAKQALAEASFDHQKN 482
GDGTT+V V L+ HP + + A + L +
Sbjct: 97 DAAAGDGTTTVVVLAGSLLRRAQSLLSAGAHPTAAADALHLLAARAVEVLHGMAIP---- 152
Query: 483 LNEASLRVDLENIARTTLSSKILSNHKEHFTKLAVDAVL 599
E S R L A T L+SK++S + + LAVDA L
Sbjct: 153 -VELSDRDALVKSASTALNSKVVSQYSTLLSPLAVDAAL 190
>02_02_0253 -
8325437-8325628,8325705-8325779,8325933-8326037,
8326249-8326374,8326451-8326835,8326931-8327208,
8327294-8327367,8327476-8327547,8327637-8327705,
8340132-8340201,8340806-8340873,8341571-8341643,
8341807-8341868,8342168-8342198
Length = 559
Score = 71.7 bits (168), Expect = 4e-13
Identities = 47/158 (29%), Positives = 74/158 (46%)
Frame = +3
Query: 120 AIAIXDLVXXTLGPXGMDKILXSCGRNSGQVEXTNDGATILXSIGVDNPAAKXLXDMSXV 299
A A+ D++ TLGP M K+L +G + TNDG IL + + +PAAK + ++S
Sbjct: 30 AKAVADIIRTTLGPQSMLKMLLDA---AGGIVVTNDGNCILRELDLAHPAAKSMIELSRT 86
Query: 300 XXEEXGDGTTSVTVXXXXXXXXXXKLIEQKLHPQTIIAGWRIASDAAKQALAEASFDHQK 479
EE GDGTTSV V I++ HP I + A D A L + +
Sbjct: 87 QDEEVGDGTTSVIVLAGEMLHVAQAFIDKNYHPTVICRAYTKALDDALSVLDKIAIP--- 143
Query: 480 NLNEASLRVDLENIARTTLSSKILSNHKEHFTKLAVDA 593
+ RV + + ++++ +K + LA+DA
Sbjct: 144 --VDVDDRVAMLGLVKSSIGTKFTGQFGDLIADLAIDA 179
>05_01_0337 -
2658647-2658722,2658797-2658915,2658995-2659102,
2659187-2659255,2659561-2659655,2659740-2659944,
2660125-2660211,2660291-2660405,2660696-2660802,
2661054-2661146,2661243-2661290,2661345-2661544,
2661993-2662128,2662228-2662291,2662779-2662912
Length = 551
Score = 64.9 bits (151), Expect = 5e-11
Identities = 43/166 (25%), Positives = 75/166 (45%)
Frame = +3
Query: 51 IRIXXNXAQXXKAEVARMXXFIXAIAIXDLVXXTLGPXGMDKILXSCGRNSGQVEXTNDG 230
+R+ A+ A A + D++ LGP G K+L +G ++ T DG
Sbjct: 3 LRVLNPNAEVLNKSAALHMNINAAKGLQDVLKTNLGPKGTIKMLVG---GAGDIKLTKDG 59
Query: 231 ATILXSIGVDNPAAKXLXDMSXVXXEEXGDGTTSVTVXXXXXXXXXXKLIEQKLHPQTII 410
T+L + + NP A + + + GDGTTS + + I++ HP+ ++
Sbjct: 60 NTLLKEMQIQNPTAIMIARTAVAQDDTSGDGTTSTVLFIGELMKQSERCIDEGTHPRFLV 119
Query: 411 AGWRIASDAAKQALAEASFDHQKNLNEASLRVDLENIARTTLSSKI 548
G+ +A A + L + F + + R L+ IARTTL +K+
Sbjct: 120 DGFDVAKRATLEFLEK--FKTSVVMGDEPDREILKMIARTTLRTKV 163
>03_06_0362 +
33379489-33379624,33380161-33380423,33380524-33380670,
33380753-33380914,33381681-33381758,33382329-33382462,
33382702-33382774,33382852-33382929,33383002-33383124,
33383223-33383317,33383723-33383932,33384115-33384172,
33384268-33384333
Length = 540
Score = 54.4 bits (125), Expect = 7e-08
Identities = 40/152 (26%), Positives = 72/152 (47%)
Frame = +3
Query: 150 TLGPXGMDKILXSCGRNSGQVEXTNDGATILXSIGVDNPAAKXLXDMSXVXXEEXGDGTT 329
+LGP GM+K++ + + ++ TND ATI+ + V +PAAK L EE GDG
Sbjct: 41 SLGPNGMNKMVIN---HLDKLFVTNDAATIVNELEVQHPAAKILVLAGRAQQEEIGDGAN 97
Query: 330 SVTVXXXXXXXXXXKLIEQKLHPQTIIAGWRIASDAAKQALAEASFDHQKNLNEASLRVD 509
+LI LHP II G+ A + + L + +N++ + + +
Sbjct: 98 LTISFAGELLEKAEELIRMGLHPSEIIIGYTKAINKTVEILEDLVEKGSENMDVRN-KEE 156
Query: 510 LENIARTTLSSKILSNHKEHFTKLAVDAVLRL 605
+ + R+ ++SK ++ L DA +++
Sbjct: 157 VVLLMRSAVASKQF-GQEDILCPLVADACMQV 187
>06_01_0097 -
810283-810296,810398-810521,810974-811066,811144-811236,
811410-811514,811661-811732,811857-811934,812210-812379,
812507-812741,812832-813074,813243-813338,813445-813582,
814014-814139,814235-814453
Length = 601
Score = 42.3 bits (95), Expect = 3e-04
Identities = 31/116 (26%), Positives = 49/116 (42%), Gaps = 4/116 (3%)
Frame = +3
Query: 129 IXDLVXXTLGPXGMDKILXSCGRNSGQVEXTNDGATILXSIGVDNPA----AKXLXDMSX 296
+ DLV TLGP G + +L S G NDG T+ + +++P AK + +
Sbjct: 79 LADLVGVTLGPKGRNVVLES---KYGSPRIVNDGVTVAREVELEDPVENIGAKLVRQAAA 135
Query: 297 VXXEEXGDGTTSVTVXXXXXXXXXXKLIEQKLHPQTIIAGWRIASDAAKQALAEAS 464
+ GDGTT+ V K++ +P I G + A + L + S
Sbjct: 136 KTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVQITRGIEKTAKALVEELKKLS 191
>02_01_0024 +
159595-159801,159892-160017,160201-160338,160431-160526,
160958-161200,161249-161537,161612-161781,161975-162052,
162156-162227,162345-162449,162555-162647,162737-162829,
163109-163235,163317-163330
Length = 616
Score = 41.9 bits (94), Expect = 4e-04
Identities = 31/116 (26%), Positives = 49/116 (42%), Gaps = 4/116 (3%)
Frame = +3
Query: 129 IXDLVXXTLGPXGMDKILXSCGRNSGQVEXTNDGATILXSIGVDNPA----AKXLXDMSX 296
+ DLV TLGP G + +L S G + NDG T+ + +++P AK + +
Sbjct: 75 LADLVGVTLGPKGRNVVLES---KYGSPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAA 131
Query: 297 VXXEEXGDGTTSVTVXXXXXXXXXXKLIEQKLHPQTIIAGWRIASDAAKQALAEAS 464
+ GDGTT+ V K++ +P I G + A L + S
Sbjct: 132 KTNDLAGDGTTTSVVLAQGMITEGVKVVAAGANPVQITRGIEKTAKALVSELQKMS 187
>01_01_0004 +
15599-15976,16383-16474,16558-17258,17501-17571,
17968-18057,18142-18321,18531-18593
Length = 524
Score = 27.9 bits (59), Expect = 6.6
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = +3
Query: 375 LIEQKLHPQTIIA--GWRIASDAAKQALAEASFDHQKNLNEASLRVDLENIARTTLSSKI 548
+++ +L PQT I ++ + ++F + +NLN ASL+ ++ I TTL
Sbjct: 316 VLKIQLFPQTYINHHNLKLLQPLVQDFTQGSTFSNVRNLN-ASLQNPMDGIINTTLYISY 374
Query: 549 LSNH 560
LSN+
Sbjct: 375 LSNY 378
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,429,451
Number of Sequences: 37544
Number of extensions: 160277
Number of successful extensions: 253
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 237
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 240
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1442939384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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