Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc7i16
         (235 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P41471 Cluster: Uncharacterized 7.1 kDa protein in IAP2...    81   4e-15
UniRef50_O10325 Cluster: Uncharacterized 6.3 kDa protein; n=5; N...    46   2e-04
UniRef50_Q6VTS2 Cluster: Putative uncharacterized protein; n=1; ...    42   0.003
UniRef50_Q06KJ7 Cluster: Putative uncharacterized protein; n=1; ...    42   0.004
UniRef50_Q54RQ5 Cluster: Putative uncharacterized protein; n=1; ...    33   1.6  
UniRef50_O96253 Cluster: Putative uncharacterized protein PFB080...    31   3.8  
UniRef50_Q8II48 Cluster: Putative uncharacterized protein; n=1; ...    31   5.0  
UniRef50_Q55GJ8 Cluster: Putative uncharacterized protein; n=1; ...    30   8.7  
UniRef50_Q22CR7 Cluster: Putative uncharacterized protein; n=1; ...    30   8.7  

>UniRef50_P41471 Cluster: Uncharacterized 7.1 kDa protein in
           IAP2-VLF1 intergenic region; n=5;
           Nucleopolyhedrovirus|Rep: Uncharacterized 7.1 kDa
           protein in IAP2-VLF1 intergenic region - Autographa
           californica nuclear polyhedrosis virus (AcMNPV)
          Length = 60

 Score = 81.4 bits (192), Expect = 4e-15
 Identities = 33/38 (86%), Positives = 37/38 (97%)
 Frame = +3

Query: 90  ANLFCFCVVSHLSDKDDSDGNRYYQYNNNCNFIYINVV 203
           A+LFC CVVSHLSD+DDSDG+RYYQYNNNCNFIYIN+V
Sbjct: 22  ASLFCRCVVSHLSDEDDSDGDRYYQYNNNCNFIYINIV 59


>UniRef50_O10325 Cluster: Uncharacterized 6.3 kDa protein; n=5;
           Nucleopolyhedrovirus|Rep: Uncharacterized 6.3 kDa
           protein - Orgyia pseudotsugata multicapsid polyhedrosis
           virus (OpMNPV)
          Length = 55

 Score = 46.0 bits (104), Expect = 2e-04
 Identities = 21/36 (58%), Positives = 25/36 (69%)
 Frame = +3

Query: 96  LFCFCVVSHLSDKDDSDGNRYYQYNNNCNFIYINVV 203
           L C CV       +D+DG+RY Q+NNNCNFIYI VV
Sbjct: 24  LLCKCVAP-----EDNDGDRYLQFNNNCNFIYIYVV 54


>UniRef50_Q6VTS2 Cluster: Putative uncharacterized protein; n=1;
           Choristoneura fumiferana DEF MNPV|Rep: Putative
           uncharacterized protein - Choristoneura fumiferana
           defective polyhedrosis virus (Cfdef)
          Length = 88

 Score = 41.9 bits (94), Expect = 0.003
 Identities = 21/36 (58%), Positives = 24/36 (66%)
 Frame = +3

Query: 96  LFCFCVVSHLSDKDDSDGNRYYQYNNNCNFIYINVV 203
           L C CV   L  K+ + G+RY   NNNCNFIYINVV
Sbjct: 52  LLCKCVTC-LEPKNTT-GDRYLHINNNCNFIYINVV 85


>UniRef50_Q06KJ7 Cluster: Putative uncharacterized protein; n=1;
           Anticarsia gemmatalis nucleopolyhedrovirus|Rep: Putative
           uncharacterized protein - Anticarsia gemmatalis nuclear
           polyhedrosis virus (AgMNPV)
          Length = 117

 Score = 41.5 bits (93), Expect = 0.004
 Identities = 20/36 (55%), Positives = 24/36 (66%)
 Frame = +3

Query: 96  LFCFCVVSHLSDKDDSDGNRYYQYNNNCNFIYINVV 203
           L C CV+  L  +D + G+ Y   NNNCNFIYINVV
Sbjct: 81  LLCKCVIC-LKPEDTTSGS-YLHINNNCNFIYINVV 114


>UniRef50_Q54RQ5 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 915

 Score = 32.7 bits (71), Expect = 1.6
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = -1

Query: 121 CDTTQKQNKLANFFKKPFTSFTLQQVNNFFVIQ 23
           CD   K+  L   FK   T+ T+Q+++NF +IQ
Sbjct: 360 CDLKIKKETLRQSFKSIITTVTIQEIDNFIIIQ 392


>UniRef50_O96253 Cluster: Putative uncharacterized protein PFB0800c;
           n=1; Plasmodium falciparum 3D7|Rep: Putative
           uncharacterized protein PFB0800c - Plasmodium falciparum
           (isolate 3D7)
          Length = 1817

 Score = 31.5 bits (68), Expect = 3.8
 Identities = 15/26 (57%), Positives = 15/26 (57%)
 Frame = +3

Query: 120 HLSDKDDSDGNRYYQYNNNCNFIYIN 197
           H  DKDDS  N Y Q  NN N IY N
Sbjct: 560 HKHDKDDSYDNTYEQMKNNKNKIYPN 585


>UniRef50_Q8II48 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium falciparum 3D7|Rep: Putative uncharacterized
           protein - Plasmodium falciparum (isolate 3D7)
          Length = 2763

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = +3

Query: 117 SHLSDKDDSDGNRYYQYNNNCNFIYIN 197
           S+  D +D D N YY Y+NN N  Y N
Sbjct: 533 SNDDDSNDDDNNNYYYYSNNYNNNYRN 559


>UniRef50_Q55GJ8 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 475

 Score = 30.3 bits (65), Expect = 8.7
 Identities = 11/16 (68%), Positives = 11/16 (68%)
 Frame = +3

Query: 129 DKDDSDGNRYYQYNNN 176
           D DD DGN Y  YNNN
Sbjct: 316 DDDDDDGNNYNNYNNN 331


>UniRef50_Q22CR7 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 777

 Score = 30.3 bits (65), Expect = 8.7
 Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
 Frame = -2

Query: 171 YYTDNSDYRR--CRLCRLDATRRRNKIN*QIFSKSLLQVLLCSRLIIFLSYNAIIINSF 1
           Y+ D  +Y +    LC L A  +  K+  +I+   L Q L  S +  F +YN ++ +S+
Sbjct: 186 YWMDTYNYHQKLANLCALTAYNQIQKMPCEIYGTLLTQKLASSTVKSFFTYNIVLDSSY 244


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,620,073
Number of Sequences: 1657284
Number of extensions: 2020818
Number of successful extensions: 8078
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 7625
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8052
length of database: 575,637,011
effective HSP length: 56
effective length of database: 482,829,107
effective search space used: 10139411247
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)