Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc7i08
(779 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY051853-1|AAK93277.1| 611|Drosophila melanogaster LD35238p pro... 38 0.020
AE013599-1718|AAF58374.1| 611|Drosophila melanogaster CG4840-PA... 38 0.020
U06458-1|AAC47347.1| 278|Drosophila melanogaster transcription ... 31 2.4
L29540-1|AAA28488.1| 278|Drosophila melanogaster TAFII40 protein. 31 2.4
AY061338-1|AAL28886.2| 274|Drosophila melanogaster LD26511p pro... 31 2.4
AE014298-2613|AAF48767.3| 278|Drosophila melanogaster CG6474-PA... 31 2.4
BT022872-1|AAY55288.1| 656|Drosophila melanogaster IP12841p pro... 30 3.1
BT022857-1|AAY55273.1| 642|Drosophila melanogaster IP13141p pro... 30 3.1
BT022837-1|AAY55253.1| 642|Drosophila melanogaster IP12941p pro... 30 3.1
AE014134-2735|AAF53543.1| 640|Drosophila melanogaster CG13260-P... 30 3.1
DQ143902-1|AAZ73098.1| 155|Drosophila melanogaster virus-induce... 30 4.1
AY119584-1|AAM50238.1| 534|Drosophila melanogaster LD14064p pro... 30 4.1
AY071148-1|AAL48770.1| 431|Drosophila melanogaster RE18101p pro... 30 4.1
AE014296-1373|AAS65055.1| 534|Drosophila melanogaster CG7942-PB... 30 4.1
AE014296-1372|AAF50486.1| 534|Drosophila melanogaster CG7942-PA... 30 4.1
AE014134-2196|ABC65895.1| 155|Drosophila melanogaster CG31764-P... 30 4.1
AE014134-2195|AAF53184.2| 431|Drosophila melanogaster CG31764-P... 30 4.1
AE014134-2194|AAF53185.2| 431|Drosophila melanogaster CG31764-P... 30 4.1
AE014296-1685|AAF50248.2| 407|Drosophila melanogaster CG12526-P... 29 9.5
AE014134-2504|AAF53402.3| 1553|Drosophila melanogaster CG3479-PA... 29 9.5
>AY051853-1|AAK93277.1| 611|Drosophila melanogaster LD35238p
protein.
Length = 611
Score = 37.5 bits (83), Expect = 0.020
Identities = 37/137 (27%), Positives = 66/137 (48%), Gaps = 3/137 (2%)
Frame = +2
Query: 251 RAALKRDVTAICLESTVGLEITKPAMDLILELIYKKLSVYASDLEVFARHARRCKIQGED 430
R ALK AI V E+ K A D I + K+ + +++ + + C+ + E
Sbjct: 287 RKALKSRDDAIESRKQVSFELEK-AKDEIKQRD-DKVKLLEEEIDELSVALKECREENEQ 344
Query: 431 VKLLVRRNKSLRSQLESRSPTAALKRKSSLAEDIFEDASSNFDEPAMKDKMR---KEEPP 601
++L RNKS + E + LK + + A+D F + SSN ++ A K +++ K+E
Sbjct: 345 -QVLFERNKSQNLETEVKD----LKTRLTAADDRFSEYSSNAEQVAQKLRVQVTEKQEQL 399
Query: 602 MEDAIDMTVENVVDLTA 652
E + + +E +TA
Sbjct: 400 DETIMQLEIEREEKMTA 416
>AE013599-1718|AAF58374.1| 611|Drosophila melanogaster CG4840-PA
protein.
Length = 611
Score = 37.5 bits (83), Expect = 0.020
Identities = 37/137 (27%), Positives = 66/137 (48%), Gaps = 3/137 (2%)
Frame = +2
Query: 251 RAALKRDVTAICLESTVGLEITKPAMDLILELIYKKLSVYASDLEVFARHARRCKIQGED 430
R ALK AI V E+ K A D I + K+ + +++ + + C+ + E
Sbjct: 287 RKALKSRDDAIESRKQVSFELEK-AKDEIKQRD-DKVKLLEEEIDELSVALKECREENEQ 344
Query: 431 VKLLVRRNKSLRSQLESRSPTAALKRKSSLAEDIFEDASSNFDEPAMKDKMR---KEEPP 601
++L RNKS + E + LK + + A+D F + SSN ++ A K +++ K+E
Sbjct: 345 -QVLFERNKSQNLETEVKD----LKTRLTAADDRFSEYSSNAEQVAQKLRVQVTEKQEQL 399
Query: 602 MEDAIDMTVENVVDLTA 652
E + + +E +TA
Sbjct: 400 DETIMQLEIEREEKMTA 416
>U06458-1|AAC47347.1| 278|Drosophila melanogaster transcription
initiation factorTFIID 42 kDa subunit protein.
Length = 278
Score = 30.7 bits (66), Expect = 2.4
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = +2
Query: 335 ILELIYKKLSVYASDLEVFARHARRCKIQGEDVKLL--VRRNKSLRSQLE 478
+LE ++ ++ D +V+A HAR+ I +DV+L V +KS LE
Sbjct: 45 LLEFTFRYVTCILDDAKVYANHARKKTIDLDDVRLATEVTLDKSFTGPLE 94
>L29540-1|AAA28488.1| 278|Drosophila melanogaster TAFII40 protein.
Length = 278
Score = 30.7 bits (66), Expect = 2.4
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = +2
Query: 335 ILELIYKKLSVYASDLEVFARHARRCKIQGEDVKLL--VRRNKSLRSQLE 478
+LE ++ ++ D +V+A HAR+ I +DV+L V +KS LE
Sbjct: 45 LLEFTFRYVTCILDDAKVYANHARKKTIDLDDVRLATEVTLDKSFTGPLE 94
>AY061338-1|AAL28886.2| 274|Drosophila melanogaster LD26511p
protein.
Length = 274
Score = 30.7 bits (66), Expect = 2.4
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = +2
Query: 335 ILELIYKKLSVYASDLEVFARHARRCKIQGEDVKLL--VRRNKSLRSQLE 478
+LE ++ ++ D +V+A HAR+ I +DV+L V +KS LE
Sbjct: 41 LLEFTFRYVTCILDDAKVYANHARKKTIDLDDVRLATEVTLDKSFTGPLE 90
>AE014298-2613|AAF48767.3| 278|Drosophila melanogaster CG6474-PA
protein.
Length = 278
Score = 30.7 bits (66), Expect = 2.4
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = +2
Query: 335 ILELIYKKLSVYASDLEVFARHARRCKIQGEDVKLL--VRRNKSLRSQLE 478
+LE ++ ++ D +V+A HAR+ I +DV+L V +KS LE
Sbjct: 45 LLEFTFRYVTCILDDAKVYANHARKKTIDLDDVRLATEVTLDKSFTGPLE 94
>BT022872-1|AAY55288.1| 656|Drosophila melanogaster IP12841p
protein.
Length = 656
Score = 30.3 bits (65), Expect = 3.1
Identities = 13/62 (20%), Positives = 37/62 (59%)
Frame = +2
Query: 458 SLRSQLESRSPTAALKRKSSLAEDIFEDASSNFDEPAMKDKMRKEEPPMEDAIDMTVENV 637
+++ +++++ T ++ S+ D+ + N +E + +++ +EEPP+E ++ V+ +
Sbjct: 81 TVKEEMDTQVETNGIQSDSNGVSDV--KTAINGNESIVAEEISEEEPPVEASVPHVVQEL 138
Query: 638 VD 643
VD
Sbjct: 139 VD 140
>BT022857-1|AAY55273.1| 642|Drosophila melanogaster IP13141p
protein.
Length = 642
Score = 30.3 bits (65), Expect = 3.1
Identities = 13/62 (20%), Positives = 37/62 (59%)
Frame = +2
Query: 458 SLRSQLESRSPTAALKRKSSLAEDIFEDASSNFDEPAMKDKMRKEEPPMEDAIDMTVENV 637
+++ +++++ T ++ S+ D+ + N +E + +++ +EEPP+E ++ V+ +
Sbjct: 67 TVKEEMDTQVETNGIQSDSNGVSDV--KTAINGNESIVAEEISEEEPPVEASVPHVVQEL 124
Query: 638 VD 643
VD
Sbjct: 125 VD 126
>BT022837-1|AAY55253.1| 642|Drosophila melanogaster IP12941p
protein.
Length = 642
Score = 30.3 bits (65), Expect = 3.1
Identities = 13/62 (20%), Positives = 37/62 (59%)
Frame = +2
Query: 458 SLRSQLESRSPTAALKRKSSLAEDIFEDASSNFDEPAMKDKMRKEEPPMEDAIDMTVENV 637
+++ +++++ T ++ S+ D+ + N +E + +++ +EEPP+E ++ V+ +
Sbjct: 67 TVKEEMDTQVETNGIQSDSNGVSDV--KTAINGNESIVAEEISEEEPPVEASVPHVVQEL 124
Query: 638 VD 643
VD
Sbjct: 125 VD 126
>AE014134-2735|AAF53543.1| 640|Drosophila melanogaster CG13260-PA
protein.
Length = 640
Score = 30.3 bits (65), Expect = 3.1
Identities = 13/62 (20%), Positives = 37/62 (59%)
Frame = +2
Query: 458 SLRSQLESRSPTAALKRKSSLAEDIFEDASSNFDEPAMKDKMRKEEPPMEDAIDMTVENV 637
+++ +++++ T ++ S+ D+ + N +E + +++ +EEPP+E ++ V+ +
Sbjct: 67 TVKEEMDTQVETNGIQSDSNGVSDV--KTAINGNESIVAEEISEEEPPVEASVPHVVQEL 124
Query: 638 VD 643
VD
Sbjct: 125 VD 126
>DQ143902-1|AAZ73098.1| 155|Drosophila melanogaster virus-induced 1
protein.
Length = 155
Score = 29.9 bits (64), Expect = 4.1
Identities = 17/84 (20%), Positives = 35/84 (41%)
Frame = +2
Query: 395 RHARRCKIQGEDVKLLVRRNKSLRSQLESRSPTAALKRKSSLAEDIFEDASSNFDEPAMK 574
RH + + ED + L R+ K R + +S + + F D + FD+ +
Sbjct: 16 RHEEDLEQEHEDKEYLERKEKKEREEFDSSDDEDGEATTPVVMSETFNDEWAEFDQDQDR 75
Query: 575 DKMRKEEPPMEDAIDMTVENVVDL 646
+ R E+ + + + N +D+
Sbjct: 76 EHDRNEDQDHDLDFENDLNNEIDI 99
>AY119584-1|AAM50238.1| 534|Drosophila melanogaster LD14064p
protein.
Length = 534
Score = 29.9 bits (64), Expect = 4.1
Identities = 34/122 (27%), Positives = 48/122 (39%), Gaps = 2/122 (1%)
Frame = +2
Query: 287 LESTVGLEITKPAMDLILELIYKKLSVYASDLEVFARHARRCKIQGEDVKL-LVRRNKSL 463
L+ E T PA D + YK + V +++ + C G D L LV L
Sbjct: 369 LQVPENFERTVPAFDPAEQSDYKHMFVDQPKVQLNPQSNTFCATLGIDDPLCLVLLANGL 428
Query: 464 RSQLESRSPTAALKRKSSLAEDIFEDASSNFDEPAMKDKMRKEEP-PMEDAIDMTVENVV 640
+ + KSS + + ED + P K K+ P P A D T ENV+
Sbjct: 429 DLPAVGATECKDRETKSSKLQAVEEDVAEPLVTPT-KRKLNLSLPAPTTAAADTTDENVI 487
Query: 641 DL 646
DL
Sbjct: 488 DL 489
>AY071148-1|AAL48770.1| 431|Drosophila melanogaster RE18101p
protein.
Length = 431
Score = 29.9 bits (64), Expect = 4.1
Identities = 17/84 (20%), Positives = 35/84 (41%)
Frame = +2
Query: 395 RHARRCKIQGEDVKLLVRRNKSLRSQLESRSPTAALKRKSSLAEDIFEDASSNFDEPAMK 574
RH + + ED + L R+ K R + +S + + F D + FD+ +
Sbjct: 292 RHEEDLEQEHEDKEYLERKEKKEREEFDSSDDEDGEATTPVVMSETFNDEWAEFDQDQDR 351
Query: 575 DKMRKEEPPMEDAIDMTVENVVDL 646
+ R E+ + + + N +D+
Sbjct: 352 EHDRNEDQDHDLDFENDLNNEIDI 375
>AE014296-1373|AAS65055.1| 534|Drosophila melanogaster CG7942-PB,
isoform B protein.
Length = 534
Score = 29.9 bits (64), Expect = 4.1
Identities = 34/122 (27%), Positives = 48/122 (39%), Gaps = 2/122 (1%)
Frame = +2
Query: 287 LESTVGLEITKPAMDLILELIYKKLSVYASDLEVFARHARRCKIQGEDVKL-LVRRNKSL 463
L+ E T PA D + YK + V +++ + C G D L LV L
Sbjct: 369 LQVPENFERTVPAFDPAEQSDYKHMFVDQPKVQLNPQSNTFCATLGIDDPLCLVLLANGL 428
Query: 464 RSQLESRSPTAALKRKSSLAEDIFEDASSNFDEPAMKDKMRKEEP-PMEDAIDMTVENVV 640
+ + KSS + + ED + P K K+ P P A D T ENV+
Sbjct: 429 DLPAVGATECKDRETKSSKLQAVEEDVAEPLVTPT-KRKLNLSLPAPTTAAADTTDENVI 487
Query: 641 DL 646
DL
Sbjct: 488 DL 489
>AE014296-1372|AAF50486.1| 534|Drosophila melanogaster CG7942-PA,
isoform A protein.
Length = 534
Score = 29.9 bits (64), Expect = 4.1
Identities = 34/122 (27%), Positives = 48/122 (39%), Gaps = 2/122 (1%)
Frame = +2
Query: 287 LESTVGLEITKPAMDLILELIYKKLSVYASDLEVFARHARRCKIQGEDVKL-LVRRNKSL 463
L+ E T PA D + YK + V +++ + C G D L LV L
Sbjct: 369 LQVPENFERTVPAFDPAEQSDYKHMFVDQPKVQLNPQSNTFCATLGIDDPLCLVLLANGL 428
Query: 464 RSQLESRSPTAALKRKSSLAEDIFEDASSNFDEPAMKDKMRKEEP-PMEDAIDMTVENVV 640
+ + KSS + + ED + P K K+ P P A D T ENV+
Sbjct: 429 DLPAVGATECKDRETKSSKLQAVEEDVAEPLVTPT-KRKLNLSLPAPTTAAADTTDENVI 487
Query: 641 DL 646
DL
Sbjct: 488 DL 489
>AE014134-2196|ABC65895.1| 155|Drosophila melanogaster CG31764-PD,
isoform D protein.
Length = 155
Score = 29.9 bits (64), Expect = 4.1
Identities = 17/84 (20%), Positives = 35/84 (41%)
Frame = +2
Query: 395 RHARRCKIQGEDVKLLVRRNKSLRSQLESRSPTAALKRKSSLAEDIFEDASSNFDEPAMK 574
RH + + ED + L R+ K R + +S + + F D + FD+ +
Sbjct: 16 RHEEDLEQEHEDKEYLERKEKKEREEFDSSDDEDGEATTPVVMSETFNDEWAEFDQDQDR 75
Query: 575 DKMRKEEPPMEDAIDMTVENVVDL 646
+ R E+ + + + N +D+
Sbjct: 76 EHDRNEDQDHDLDFENDLNNEIDI 99
>AE014134-2195|AAF53184.2| 431|Drosophila melanogaster CG31764-PB,
isoform B protein.
Length = 431
Score = 29.9 bits (64), Expect = 4.1
Identities = 17/84 (20%), Positives = 35/84 (41%)
Frame = +2
Query: 395 RHARRCKIQGEDVKLLVRRNKSLRSQLESRSPTAALKRKSSLAEDIFEDASSNFDEPAMK 574
RH + + ED + L R+ K R + +S + + F D + FD+ +
Sbjct: 292 RHEEDLEQEHEDKEYLERKEKKEREEFDSSDDEDGEATTPVVMSETFNDEWAEFDQDQDR 351
Query: 575 DKMRKEEPPMEDAIDMTVENVVDL 646
+ R E+ + + + N +D+
Sbjct: 352 EHDRNEDQDHDLDFENDLNNEIDI 375
>AE014134-2194|AAF53185.2| 431|Drosophila melanogaster CG31764-PA,
isoform A protein.
Length = 431
Score = 29.9 bits (64), Expect = 4.1
Identities = 17/84 (20%), Positives = 35/84 (41%)
Frame = +2
Query: 395 RHARRCKIQGEDVKLLVRRNKSLRSQLESRSPTAALKRKSSLAEDIFEDASSNFDEPAMK 574
RH + + ED + L R+ K R + +S + + F D + FD+ +
Sbjct: 292 RHEEDLEQEHEDKEYLERKEKKEREEFDSSDDEDGEATTPVVMSETFNDEWAEFDQDQDR 351
Query: 575 DKMRKEEPPMEDAIDMTVENVVDL 646
+ R E+ + + + N +D+
Sbjct: 352 EHDRNEDQDHDLDFENDLNNEIDI 375
>AE014296-1685|AAF50248.2| 407|Drosophila melanogaster CG12526-PA
protein.
Length = 407
Score = 28.7 bits (61), Expect = 9.5
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2
Query: 266 RDVTAICLESTVGLEITKPAMDLILELIYK 355
R +CL++TV L+++ P M + L + YK
Sbjct: 368 RSQKPVCLKATVVLDLSMPTMSIFLGMSYK 397
>AE014134-2504|AAF53402.3| 1553|Drosophila melanogaster CG3479-PA,
isoform A protein.
Length = 1553
Score = 28.7 bits (61), Expect = 9.5
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = +2
Query: 425 EDVKLLVRRNKSLRSQLESRSPTAALKRKSSLAEDIFEDASSNFDEPA 568
+ ++ L RNK R+ L S P+ + L D EDA EPA
Sbjct: 1327 QQMQQLELRNKQFRAHLASDDPSNDVHFVQGLTSDAREDADCEDSEPA 1374
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,680,625
Number of Sequences: 53049
Number of extensions: 542887
Number of successful extensions: 1480
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1425
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1480
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3623012976
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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