Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc7i02
(214 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces... 24 3.1
SPBC1683.13c |||transcription factor |Schizosaccharomyces pombe|... 24 3.1
SPAC27F1.04c |nuf2||spindle pole body protein Nuf2|Schizosacchar... 23 4.2
SPAC17A5.16 |||human down-regulated in multiple cancers-1 homolo... 23 4.2
SPAP7G5.03 |||conjugation protein |Schizosaccharomyces pombe|chr... 23 5.5
SPBC1861.03 |mak10||NatC N-acetyltransferase complex subunit Mak... 23 5.5
SPCC736.11 |ago1|csp9|argonaute|Schizosaccharomyces pombe|chr 3|... 23 7.3
SPAC22G7.02 |kap111||karyopherin Kap111|Schizosaccharomyces pomb... 23 7.3
SPCC736.14 |dis1||microtubule-associated protein Dis1 |Schizosac... 23 7.3
SPAC8F11.06 |||nuclear envelope protein |Schizosaccharomyces pom... 23 7.3
SPCC338.13 |cog4||Golgi transport complex subunit Cog4 |Schizosa... 22 9.6
SPAC1687.11 |spb1||rRNA methyltransferase Spb1 |Schizosaccharomy... 22 9.6
SPBC21C3.01c |vps13a|vps1301, SPBC31F10.18c|chorein homolog|Schi... 22 9.6
SPBC13G1.04c |||alkB homolog|Schizosaccharomyces pombe|chr 2|||M... 22 9.6
>SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 3699
Score = 23.8 bits (49), Expect = 3.1
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +1
Query: 19 LPNTKRLLHTWKLKQVFSSFNGSKLP 96
+P TK +L + L +VFS NGS +P
Sbjct: 2416 VPMTKPILSS--LPEVFSKHNGSAIP 2439
>SPBC1683.13c |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 618
Score = 23.8 bits (49), Expect = 3.1
Identities = 11/41 (26%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = -3
Query: 155 SSIIFTQLVLNTIISVLSEDGSLLPLKLENT-CFNFHVCNK 36
S+++ ++ +++I +L+ LKL+NT + F +C K
Sbjct: 453 STVLLLHMLYHSVIIILNRPSDDNYLKLDNTERYTFEICWK 493
>SPAC27F1.04c |nuf2||spindle pole body protein
Nuf2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 441
Score = 23.4 bits (48), Expect = 4.2
Identities = 12/41 (29%), Positives = 19/41 (46%)
Frame = +3
Query: 48 VEIKTSVFEFQRQQTAVFAQNANYCV*HELRENNRTNDARK 170
+EI EF+++Q NA + HE N+ +A K
Sbjct: 322 IEINKKKLEFRKEQLLKQLSNAQEKLEHEQHSRNQKLEAAK 362
>SPAC17A5.16 |||human down-regulated in multiple cancers-1 homolog
3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 925
Score = 23.4 bits (48), Expect = 4.2
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = +1
Query: 52 KLKQVFSSFNGSKLPSSLKTLIIVFNTSCVKIIELTTPGNWWYRLXVSSNTS 207
+L+QVF + N KLP+ V T ++ L + G+ + S NTS
Sbjct: 620 RLQQVFLNLNSMKLPA-------VAQTKSQPLVALNSEGSSDFESKSSDNTS 664
>SPAP7G5.03 |||conjugation protein |Schizosaccharomyces pombe|chr
1|||Manual
Length = 703
Score = 23.0 bits (47), Expect = 5.5
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +3
Query: 9 RWQIAKHKAFIAHVEIKTSVFEFQR 83
+W +HKAF+ I+++ FE R
Sbjct: 308 KWCRIRHKAFLLDEHIRSNKFEDTR 332
>SPBC1861.03 |mak10||NatC N-acetyltransferase complex subunit Mak10
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 708
Score = 23.0 bits (47), Expect = 5.5
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -1
Query: 184 AGTTNFLASLVRLFSRNSC 128
A +TN + LVR+ S N C
Sbjct: 425 AHSTNIMVDLVRICSHNPC 443
>SPCC736.11 |ago1|csp9|argonaute|Schizosaccharomyces pombe|chr
3|||Manual
Length = 834
Score = 22.6 bits (46), Expect = 7.3
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -3
Query: 185 SRYHQFPGVVSSIIFTQLVL 126
S+Y P V+SSI+F L+L
Sbjct: 130 SKYSSDPQVLSSIMFLDLLL 149
>SPAC22G7.02 |kap111||karyopherin Kap111|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 990
Score = 22.6 bits (46), Expect = 7.3
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -3
Query: 143 FTQLVLNTIISVLSEDGSLL 84
FTQL+LN I++L + LL
Sbjct: 841 FTQLILNRAINLLGKPERLL 860
>SPCC736.14 |dis1||microtubule-associated protein Dis1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 882
Score = 22.6 bits (46), Expect = 7.3
Identities = 9/14 (64%), Positives = 13/14 (92%)
Frame = -1
Query: 178 TTNFLASLVRLFSR 137
TTN LA+LV++FS+
Sbjct: 494 TTNVLATLVQIFSQ 507
>SPAC8F11.06 |||nuclear envelope protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 297
Score = 22.6 bits (46), Expect = 7.3
Identities = 13/51 (25%), Positives = 23/51 (45%)
Frame = +3
Query: 33 AFIAHVEIKTSVFEFQRQQTAVFAQNANYCV*HELRENNRTNDARKLVVPA 185
AFI+H+ KT VF ++ N + + + R + +D +PA
Sbjct: 218 AFISHISYKTMVFSLILVFGSLLTSNYAFGL-YRARHSQNIHDYAANAIPA 267
>SPCC338.13 |cog4||Golgi transport complex subunit Cog4
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 738
Score = 22.2 bits (45), Expect = 9.6
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = -3
Query: 158 VSSIIFTQLVLNTIISVLSED 96
VSS+ FT+ V ++I +L D
Sbjct: 452 VSSLFFTRFVNESLIPILRND 472
>SPAC1687.11 |spb1||rRNA methyltransferase Spb1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 802
Score = 22.2 bits (45), Expect = 9.6
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = +1
Query: 49 WKLKQVFSSFNGSKLPSSLKTLIIVF 126
W KQ+F+ +K PSS +F
Sbjct: 170 WVFKQLFNKVEATKPPSSRNVSAEIF 195
>SPBC21C3.01c |vps13a|vps1301, SPBC31F10.18c|chorein
homolog|Schizosaccharomyces pombe|chr 2|||Manual
Length = 3071
Score = 22.2 bits (45), Expect = 9.6
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +1
Query: 85 SKLPSSLKTLIIVFNTSCVK 144
S L L+TL+I++N C++
Sbjct: 599 STLIVHLRTLVIIYNRVCIE 618
>SPBC13G1.04c |||alkB homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 273
Score = 22.2 bits (45), Expect = 9.6
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +3
Query: 36 FIAHVEIKTSVFEFQRQQTAVFAQN 110
F A VEIK VF FQ+ + +N
Sbjct: 38 FEALVEIKPRVFSFQKAPGLLILKN 62
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 831,957
Number of Sequences: 5004
Number of extensions: 12113
Number of successful extensions: 42
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42
length of database: 2,362,478
effective HSP length: 50
effective length of database: 2,112,278
effective search space used: 42245560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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