Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc7i01
(751 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79694-6|CAB01958.1| 316|Caenorhabditis elegans Hypothetical pr... 33 0.29
Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical pr... 31 0.66
Z79694-5|CAB01961.1| 316|Caenorhabditis elegans Hypothetical pr... 31 0.87
M25478-1|AAA27992.1| 168|Caenorhabditis elegans collagen protein. 31 0.87
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 31 1.2
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 30 1.5
AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen prot... 30 1.5
AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical ... 29 2.7
AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical ... 29 2.7
Z50028-5|CAA90338.1| 661|Caenorhabditis elegans Hypothetical pr... 29 3.5
AL032624-4|CAA21522.1| 661|Caenorhabditis elegans Hypothetical ... 29 3.5
AL032624-1|CAA21521.1| 209|Caenorhabditis elegans Hypothetical ... 29 3.5
Z54237-10|CAJ43909.1| 684|Caenorhabditis elegans Hypothetical p... 29 4.7
Z54237-9|CAA90991.1| 1424|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z54237-8|CAE52902.1| 771|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z54237-7|CAB54312.2| 645|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z54235-13|CAJ43902.1| 684|Caenorhabditis elegans Hypothetical p... 29 4.7
Z54235-11|CAA90978.1| 1424|Caenorhabditis elegans Hypothetical p... 29 4.7
Z54235-10|CAE52905.1| 771|Caenorhabditis elegans Hypothetical p... 29 4.7
Z54235-9|CAB54190.2| 645|Caenorhabditis elegans Hypothetical pr... 29 4.7
AL110499-2|CAB57913.1| 297|Caenorhabditis elegans Hypothetical ... 29 4.7
AL110499-1|CAB57912.1| 325|Caenorhabditis elegans Hypothetical ... 29 4.7
AF067211-1|AAC16986.1| 455|Caenorhabditis elegans Hypothetical ... 29 4.7
AC006615-3|AAK68232.1| 1148|Caenorhabditis elegans Hypothetical ... 29 4.7
AC006615-2|AAK68231.1| 1121|Caenorhabditis elegans Hypothetical ... 29 4.7
AC024214-13|AAM97984.1| 296|Caenorhabditis elegans Collagen pro... 28 6.2
AF251308-1|AAF82360.1| 1413|Caenorhabditis elegans guanine nucle... 28 8.1
AC006692-9|AAF39972.5| 1493|Caenorhabditis elegans Drosophila so... 28 8.1
>Z79694-6|CAB01958.1| 316|Caenorhabditis elegans Hypothetical
protein C15A11.6 protein.
Length = 316
Score = 32.7 bits (71), Expect = 0.29
Identities = 21/62 (33%), Positives = 24/62 (38%), Gaps = 8/62 (12%)
Frame = -2
Query: 657 PSHKGQCGARHHQ--------EGLLPPGGAPAHLFPDDTAPSGSSAVHANRGDYSPPLAP 502
P G G HHQ +GL P GAP P P+G+ A G PP P
Sbjct: 117 PGQPGVAGPSHHQKQECIKCPQGLPGPAGAPGQ--PGPKGPNGNPGAPAQGGGQGPPGPP 174
Query: 501 RP 496
P
Sbjct: 175 GP 176
>Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical
protein C09G5.5 protein.
Length = 317
Score = 31.5 bits (68), Expect = 0.66
Identities = 20/62 (32%), Positives = 25/62 (40%), Gaps = 8/62 (12%)
Frame = -2
Query: 657 PSHKGQCGARHHQE--------GLLPPGGAPAHLFPDDTAPSGSSAVHANRGDYSPPLAP 502
P G G HHQ+ G P GAP + P P+G+ A+ G PP P
Sbjct: 115 PGQPGVAGPAHHQQQECIKCPQGAPGPAGAPGN--PGPQGPNGNPGAPAHGGGQGPPGPP 172
Query: 501 RP 496
P
Sbjct: 173 GP 174
>Z79694-5|CAB01961.1| 316|Caenorhabditis elegans Hypothetical
protein C15A11.5 protein.
Length = 316
Score = 31.1 bits (67), Expect = 0.87
Identities = 20/62 (32%), Positives = 23/62 (37%), Gaps = 8/62 (12%)
Frame = -2
Query: 657 PSHKGQCGARHHQ--------EGLLPPGGAPAHLFPDDTAPSGSSAVHANRGDYSPPLAP 502
P G G HHQ +GL P G P P P+G+ A G PP P
Sbjct: 117 PGQPGVAGPSHHQKQECIKCPQGLPGPAGVPGQ--PGPKGPNGNPGAPAQGGGQGPPGPP 174
Query: 501 RP 496
P
Sbjct: 175 GP 176
>M25478-1|AAA27992.1| 168|Caenorhabditis elegans collagen protein.
Length = 168
Score = 31.1 bits (67), Expect = 0.87
Identities = 20/62 (32%), Positives = 23/62 (37%), Gaps = 8/62 (12%)
Frame = -2
Query: 657 PSHKGQCGARHHQ--------EGLLPPGGAPAHLFPDDTAPSGSSAVHANRGDYSPPLAP 502
P G G HHQ +GL P G P P P+G+ A G PP P
Sbjct: 104 PGQPGVAGPSHHQKQECIKCPQGLPGPAGVPGQ--PGPKGPNGNPGAPAQPGGQGPPGPP 161
Query: 501 RP 496
P
Sbjct: 162 GP 163
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 30.7 bits (66), Expect = 1.2
Identities = 25/77 (32%), Positives = 31/77 (40%)
Frame = -2
Query: 630 RHHQEGLLPPGGAPAHLFPDDTAPSGSSAVHANRGDYSPPLAPRPTYCPVAF*GGTYEGC 451
+HH G P GG P P PSG G + P AP P+ P G + G
Sbjct: 139 KHHSTGAPPSGGPPGPFDPSGAPPSGGPP-----GLFDPSGAP-PSGGPPGPFGPS--GA 190
Query: 450 SPAMATPRLRDSSAAPP 400
P+ P + S APP
Sbjct: 191 PPSGGPPGPFNPSEAPP 207
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 30.3 bits (65), Expect = 1.5
Identities = 21/71 (29%), Positives = 25/71 (35%), Gaps = 1/71 (1%)
Frame = -2
Query: 606 PPGGAPAHLFPDDTAPSGSSAVHANRGDYSPPLAPR-PTYCPVAF*GGTYEGCSPAMATP 430
PP P FP T PS SS +PP R P P + P P
Sbjct: 444 PPSAPPTIKFPISTGPSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPPLP 503
Query: 429 RLRDSSAAPPP 397
+ S+ PPP
Sbjct: 504 PIATPSSVPPP 514
>AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen protein
68 protein.
Length = 329
Score = 30.3 bits (65), Expect = 1.5
Identities = 23/78 (29%), Positives = 27/78 (34%), Gaps = 2/78 (2%)
Frame = -2
Query: 657 PSHKGQCGARHHQEGLLPPG--GAPAHLFPDDTAPSGSSAVHANRGDYSPPLAPRPTYCP 484
P G G + PPG GAP P P G + G+ P P P P
Sbjct: 252 PGTPGPAGPPGPPGPIGPPGQPGAPGSSQPGPQGPPGDPGIDGAPGNPGSPGEPGPPGQP 311
Query: 483 VAF*GGTYEGCSPAMATP 430
A GG + C P P
Sbjct: 312 GA--GGGCDHCPPPRTAP 327
>AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical
protein F56F11.4a protein.
Length = 411
Score = 29.5 bits (63), Expect = 2.7
Identities = 28/77 (36%), Positives = 37/77 (48%), Gaps = 8/77 (10%)
Frame = -2
Query: 732 LDGPRGPS---IGAAVTCFTTCTAIRVTPSHKGQC----GARHHQE-GLLPPGGAPAHLF 577
L GP G + AV T CT IRV+ S Q GAR +E ++ AP+ +F
Sbjct: 193 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIF 252
Query: 576 PDDTAPSGSSAVHANRG 526
D+ GSS V +RG
Sbjct: 253 MDEIDSIGSSRVEGSRG 269
>AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical
protein F56F11.4b protein.
Length = 432
Score = 29.5 bits (63), Expect = 2.7
Identities = 28/77 (36%), Positives = 37/77 (48%), Gaps = 8/77 (10%)
Frame = -2
Query: 732 LDGPRGPS---IGAAVTCFTTCTAIRVTPSHKGQC----GARHHQE-GLLPPGGAPAHLF 577
L GP G + AV T CT IRV+ S Q GAR +E ++ AP+ +F
Sbjct: 214 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIF 273
Query: 576 PDDTAPSGSSAVHANRG 526
D+ GSS V +RG
Sbjct: 274 MDEIDSIGSSRVEGSRG 290
>Z50028-5|CAA90338.1| 661|Caenorhabditis elegans Hypothetical
protein F46F6.1a protein.
Length = 661
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = -2
Query: 750 PKVPARLDGPRGPSIGAAVTCFTTCTAIRVTP 655
P+ PA + GP S G T F T +AIRV P
Sbjct: 620 PRRPASV-GPSSTSSGQPATAFATSSAIRVPP 650
>AL032624-4|CAA21522.1| 661|Caenorhabditis elegans Hypothetical
protein F46F6.1a protein.
Length = 661
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = -2
Query: 750 PKVPARLDGPRGPSIGAAVTCFTTCTAIRVTP 655
P+ PA + GP S G T F T +AIRV P
Sbjct: 620 PRRPASV-GPSSTSSGQPATAFATSSAIRVPP 650
>AL032624-1|CAA21521.1| 209|Caenorhabditis elegans Hypothetical
protein F46F6.1b protein.
Length = 209
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = -2
Query: 750 PKVPARLDGPRGPSIGAAVTCFTTCTAIRVTP 655
P+ PA + GP S G T F T +AIRV P
Sbjct: 168 PRRPASV-GPSSTSSGQPATAFATSSAIRVPP 198
>Z54237-10|CAJ43909.1| 684|Caenorhabditis elegans Hypothetical
protein T11B7.4e protein.
Length = 684
Score = 28.7 bits (61), Expect = 4.7
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = +3
Query: 465 CRLRTQRGNRWAGALAGGSNLPCWRAPHCSH 557
CR + G+RW AL + C+ C+H
Sbjct: 634 CRYPIEAGDRWVEALGNAFHSNCFTCARCNH 664
>Z54237-9|CAA90991.1| 1424|Caenorhabditis elegans Hypothetical protein
T11B7.4d protein.
Length = 1424
Score = 28.7 bits (61), Expect = 4.7
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = +3
Query: 465 CRLRTQRGNRWAGALAGGSNLPCWRAPHCSH 557
CR + G+RW AL + C+ C+H
Sbjct: 1374 CRYPIEAGDRWVEALGNAFHSNCFTCARCNH 1404
>Z54237-8|CAE52902.1| 771|Caenorhabditis elegans Hypothetical
protein T11B7.4c protein.
Length = 771
Score = 28.7 bits (61), Expect = 4.7
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = +3
Query: 465 CRLRTQRGNRWAGALAGGSNLPCWRAPHCSH 557
CR + G+RW AL + C+ C+H
Sbjct: 721 CRYPIEAGDRWVEALGNAFHSNCFTCARCNH 751
>Z54237-7|CAB54312.2| 645|Caenorhabditis elegans Hypothetical
protein T11B7.4b protein.
Length = 645
Score = 28.7 bits (61), Expect = 4.7
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = +3
Query: 465 CRLRTQRGNRWAGALAGGSNLPCWRAPHCSH 557
CR + G+RW AL + C+ C+H
Sbjct: 595 CRYPIEAGDRWVEALGNAFHSNCFTCARCNH 625
>Z54235-13|CAJ43902.1| 684|Caenorhabditis elegans Hypothetical
protein T11B7.4e protein.
Length = 684
Score = 28.7 bits (61), Expect = 4.7
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = +3
Query: 465 CRLRTQRGNRWAGALAGGSNLPCWRAPHCSH 557
CR + G+RW AL + C+ C+H
Sbjct: 634 CRYPIEAGDRWVEALGNAFHSNCFTCARCNH 664
>Z54235-11|CAA90978.1| 1424|Caenorhabditis elegans Hypothetical
protein T11B7.4d protein.
Length = 1424
Score = 28.7 bits (61), Expect = 4.7
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = +3
Query: 465 CRLRTQRGNRWAGALAGGSNLPCWRAPHCSH 557
CR + G+RW AL + C+ C+H
Sbjct: 1374 CRYPIEAGDRWVEALGNAFHSNCFTCARCNH 1404
>Z54235-10|CAE52905.1| 771|Caenorhabditis elegans Hypothetical
protein T11B7.4c protein.
Length = 771
Score = 28.7 bits (61), Expect = 4.7
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = +3
Query: 465 CRLRTQRGNRWAGALAGGSNLPCWRAPHCSH 557
CR + G+RW AL + C+ C+H
Sbjct: 721 CRYPIEAGDRWVEALGNAFHSNCFTCARCNH 751
>Z54235-9|CAB54190.2| 645|Caenorhabditis elegans Hypothetical
protein T11B7.4b protein.
Length = 645
Score = 28.7 bits (61), Expect = 4.7
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = +3
Query: 465 CRLRTQRGNRWAGALAGGSNLPCWRAPHCSH 557
CR + G+RW AL + C+ C+H
Sbjct: 595 CRYPIEAGDRWVEALGNAFHSNCFTCARCNH 625
>AL110499-2|CAB57913.1| 297|Caenorhabditis elegans Hypothetical
protein Y62F5A.1b protein.
Length = 297
Score = 28.7 bits (61), Expect = 4.7
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = -2
Query: 606 PPGGAPAHLFPDDTAPSGSSAVHANRGDY 520
PP AP P T PS S + N+ +Y
Sbjct: 219 PPSSAPMTTAPSSTGPSSSQPISGNQPEY 247
>AL110499-1|CAB57912.1| 325|Caenorhabditis elegans Hypothetical
protein Y62F5A.1a protein.
Length = 325
Score = 28.7 bits (61), Expect = 4.7
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = -2
Query: 606 PPGGAPAHLFPDDTAPSGSSAVHANRGDY 520
PP AP P T PS S + N+ +Y
Sbjct: 219 PPSSAPMTTAPSSTGPSSSQPISGNQPEY 247
>AF067211-1|AAC16986.1| 455|Caenorhabditis elegans Hypothetical
protein B0205.10 protein.
Length = 455
Score = 28.7 bits (61), Expect = 4.7
Identities = 22/72 (30%), Positives = 26/72 (36%), Gaps = 1/72 (1%)
Frame = -2
Query: 606 PPGGAPAHLFPDDTAPSGSSAVHANRGDYSPPLAPRPT-YCPVAF*GGTYEGCSPAMATP 430
P APA PD P + +P AP PT P A +PA TP
Sbjct: 69 PEAPAPAPTAPDVQQPGPAPVPVPEPAQLAPQSAPEPTPDAPAAAPVQETPQVAPAPETP 128
Query: 429 RLRDSSAAPPPV 394
+ AP PV
Sbjct: 129 APAPETPAPAPV 140
>AC006615-3|AAK68232.1| 1148|Caenorhabditis elegans Hypothetical
protein C36B7.5b protein.
Length = 1148
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/38 (36%), Positives = 17/38 (44%)
Frame = -2
Query: 459 EGCSPAMATPRLRDSSAAPPPVSVNVRRYHVQVMGRSG 346
EG S + S APPP+S VRR+ V G
Sbjct: 716 EGISKRNRVCSMEGQSPAPPPISFQVRRHRTYVTASLG 753
>AC006615-2|AAK68231.1| 1121|Caenorhabditis elegans Hypothetical
protein C36B7.5a protein.
Length = 1121
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/38 (36%), Positives = 17/38 (44%)
Frame = -2
Query: 459 EGCSPAMATPRLRDSSAAPPPVSVNVRRYHVQVMGRSG 346
EG S + S APPP+S VRR+ V G
Sbjct: 716 EGISKRNRVCSMEGQSPAPPPISFQVRRHRTYVTASLG 753
>AC024214-13|AAM97984.1| 296|Caenorhabditis elegans Collagen
protein 106 protein.
Length = 296
Score = 28.3 bits (60), Expect = 6.2
Identities = 30/98 (30%), Positives = 34/98 (34%), Gaps = 12/98 (12%)
Frame = -2
Query: 741 PARLDGPRG-PSIGAAVT-----CFTTCTAIRVTPSHKGQCGARHHQEGLLPPG-----G 595
P LDGP G P AA+ +C A P C +G PG G
Sbjct: 111 PDGLDGPDGHPGYAAAIKENFGGACISCPAGPAGPPGPDGCAGEPGTDGA--PGEDGQNG 168
Query: 594 APAHLF-PDDTAPSGSSAVHANRGDYSPPLAPRPTYCP 484
AP P +T P G G PP A TY P
Sbjct: 169 APGSPGGPGETGPQGHQGKPGRAGPRGPPGAKGQTYLP 206
>AF251308-1|AAF82360.1| 1413|Caenorhabditis elegans guanine nucleotide
exchange factorfor RAS protein.
Length = 1413
Score = 27.9 bits (59), Expect = 8.1
Identities = 22/82 (26%), Positives = 34/82 (41%), Gaps = 5/82 (6%)
Frame = -2
Query: 723 PRGPSIGAAVTCFTTCTAIRVTPSHKGQCGARHH-----QEGLLPPGGAPAHLFPDDTAP 559
P+ + + T TT T TPS G + H Q+ + P +P D+++P
Sbjct: 1301 PKSSGMMSTATSPTTLTTT-TTPSSAGGPPPKLHPRRMTQQPMSPLAKSPLTPSRDNSSP 1359
Query: 558 SGSSAVHANRGDYSPPLAPRPT 493
S +PPL PRP+
Sbjct: 1360 SAFQFPVVYEASTAPPLPPRPS 1381
>AC006692-9|AAF39972.5| 1493|Caenorhabditis elegans Drosophila sos
homolog protein 1 protein.
Length = 1493
Score = 27.9 bits (59), Expect = 8.1
Identities = 22/82 (26%), Positives = 34/82 (41%), Gaps = 5/82 (6%)
Frame = -2
Query: 723 PRGPSIGAAVTCFTTCTAIRVTPSHKGQCGARHH-----QEGLLPPGGAPAHLFPDDTAP 559
P+ + + T TT T TPS G + H Q+ + P +P D+++P
Sbjct: 1301 PKSSGMMSTATSPTTLTTT-TTPSSAGGPPPKLHPRRMTQQPMSPLAKSPLTPSRDNSSP 1359
Query: 558 SGSSAVHANRGDYSPPLAPRPT 493
S +PPL PRP+
Sbjct: 1360 SAFQFPVVYEASTAPPLPPRPS 1381
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,628,132
Number of Sequences: 27780
Number of extensions: 504479
Number of successful extensions: 1382
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1208
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1366
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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