Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc7h17
         (549 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P41679 Cluster: Uncharacterized 28.5 kDa protein in PK2...   307   1e-82
UniRef50_O10361 Cluster: Uncharacterized 26.5 kDa protein; n=7; ...   169   4e-41
UniRef50_O00254 Cluster: Proteinase-activated receptor 3 precurs...    36   0.82 
UniRef50_UPI00006CB411 Cluster: hypothetical protein TTHERM_0047...    35   1.1  
UniRef50_Q6AMT7 Cluster: Putative uncharacterized protein; n=1; ...    34   2.5  
UniRef50_P83119 Cluster: Probable G-protein coupled receptor Mth...    34   2.5  
UniRef50_Q91GT9 Cluster: LAMP; n=3; Human herpesvirus 8|Rep: LAM...    33   3.3  
UniRef50_UPI00006CA6E0 Cluster: hypothetical protein TTHERM_0068...    33   4.4  
UniRef50_A2Y5Q5 Cluster: Putative uncharacterized protein; n=2; ...    33   4.4  
UniRef50_A2F5D1 Cluster: Putative uncharacterized protein; n=1; ...    33   5.8  
UniRef50_Q89C13 Cluster: Sensor protein; n=5; cellular organisms...    32   7.6  
UniRef50_Q7UM72 Cluster: Putative uncharacterized protein; n=1; ...    32   7.6  

>UniRef50_P41679 Cluster: Uncharacterized 28.5 kDa protein in
           PK2-LEF7 intergenic region; n=5;
           Nucleopolyhedrovirus|Rep: Uncharacterized 28.5 kDa
           protein in PK2-LEF7 intergenic region - Autographa
           californica nuclear polyhedrosis virus (AcMNPV)
          Length = 247

 Score =  307 bits (754), Expect = 1e-82
 Identities = 144/175 (82%), Positives = 148/175 (84%), Gaps = 3/175 (1%)
 Frame = +3

Query: 33  CCTKYTRLSTDTKVKFPYAALSYINVTLCTYTAMLVGYMATFN---EFEYLQYWFLLSFL 203
           CCTKYTRLSTDTK+KFPY ALSYINVTLCTYTAMLVGYM TFN   E +YLQYW LLSFL
Sbjct: 6   CCTKYTRLSTDTKMKFPYVALSYINVTLCTYTAMLVGYMVTFNDSSELKYLQYWLLLSFL 65

Query: 204 MSVALNAPTLWTAFKTTEAHEVVYEMKLFQAMYFSNVLLNYVVFSDNQMGTNFVFVNNLI 383
           MSV LNAPTLWT  KTTEAHEV+YEMKLF AMYFSNVLLNYVVF DNQMGTNFVFVNNLI
Sbjct: 66  MSVVLNAPTLWTMLKTTEAHEVIYEMKLFHAMYFSNVLLNYVVFLDNQMGTNFVFVNNLI 125

Query: 384 HCCVXXXXXXXXXXXXGHTMGAYTDYRYAKSCYMVILFVSVMSFTIVMGLECLKT 548
           HCCV            GHTMG YTDY+Y KSCYMVILFVSVMS TIVMGLECLKT
Sbjct: 126 HCCVLFMIFVELLILLGHTMGTYTDYQYVKSCYMVILFVSVMSVTIVMGLECLKT 180


>UniRef50_O10361 Cluster: Uncharacterized 26.5 kDa protein; n=7;
           Nucleopolyhedrovirus|Rep: Uncharacterized 26.5 kDa
           protein - Orgyia pseudotsugata multicapsid polyhedrosis
           virus (OpMNPV)
          Length = 243

 Score =  169 bits (411), Expect = 4e-41
 Identities = 76/174 (43%), Positives = 113/174 (64%), Gaps = 3/174 (1%)
 Frame = +3

Query: 36  CTKYTRLSTDTKVKFPYAALSYINVTLCTYTAMLVGYMA---TFNEFEYLQYWFLLSFLM 206
           C+ Y RLS +T+ +FP+AA+SY+NVTLC + A++ GY++   TF E ++LQYW +LS  +
Sbjct: 7   CSGYIRLSNETRARFPFAAMSYVNVTLCAFGAVVAGYLSAANTFVELQFLQYWLMLSLFV 66

Query: 207 SVALNAPTLWTAFKTTEAHEVVYEMKLFQAMYFSNVLLNYVVFSDNQMGTNFVFVNNLIH 386
           +  +NA TL+     TEAHE+VYE+K+  AMYF+N L+N+ + +  +   + V V NL+H
Sbjct: 67  TGLINA-TLFLRQGKTEAHEIVYELKMLHAMYFANALVNHGLLATERSAVSAVLVANLVH 125

Query: 387 CCVXXXXXXXXXXXXGHTMGAYTDYRYAKSCYMVILFVSVMSFTIVMGLECLKT 548
           CC             GH +G Y+DYRYAK+CYM+ LFVS     I +G   +K+
Sbjct: 126 CCALVLLFVELTVLLGHALGTYSDYRYAKACYMLALFVSAAVAVITVGASGMKS 179


>UniRef50_O00254 Cluster: Proteinase-activated receptor 3 precursor;
           n=16; Amniota|Rep: Proteinase-activated receptor 3
           precursor - Homo sapiens (Human)
          Length = 374

 Score = 35.5 bits (78), Expect = 0.82
 Identities = 29/109 (26%), Positives = 52/109 (47%), Gaps = 1/109 (0%)
 Frame = +3

Query: 45  YTRLSTDTKVKFPYAALSYINVTLCTYTAMLVGYMATFNEFEYLQYWFLLSFLMSVALNA 224
           +T  +   K+K P  + S+++V   T     +GY+ +    + +   +LL F++ V  NA
Sbjct: 59  WTGATITVKIKCPEESASHLHVKNAT-----MGYLTSSLSTKLIPAIYLLVFVVGVPANA 113

Query: 225 PTLWTA-FKTTEAHEVVYEMKLFQAMYFSNVLLNYVVFSDNQMGTNFVF 368
            TLW   F+T      V+   L  A +   V L + + + +  G N+VF
Sbjct: 114 VTLWMLFFRTRSICTTVFYTNLAIADFLFCVTLPFKI-AYHLNGNNWVF 161


>UniRef50_UPI00006CB411 Cluster: hypothetical protein
           TTHERM_00475020; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00475020 - Tetrahymena
           thermophila SB210
          Length = 274

 Score = 35.1 bits (77), Expect = 1.1
 Identities = 18/58 (31%), Positives = 29/58 (50%)
 Frame = +3

Query: 198 FLMSVALNAPTLWTAFKTTEAHEVVYEMKLFQAMYFSNVLLNYVVFSDNQMGTNFVFV 371
           FL+S+AL       A K    +E+ + + +FQ  Y  N+  NY +  +NQ     VF+
Sbjct: 4   FLLSLALVTGLASYALKNFSDYELYFPIAIFQISYAFNIYYNYAIRVENQNMNQGVFI 61


>UniRef50_Q6AMT7 Cluster: Putative uncharacterized protein; n=1;
           Desulfotalea psychrophila|Rep: Putative uncharacterized
           protein - Desulfotalea psychrophila
          Length = 739

 Score = 33.9 bits (74), Expect = 2.5
 Identities = 14/37 (37%), Positives = 23/37 (62%)
 Frame = +3

Query: 93  LSYINVTLCTYTAMLVGYMATFNEFEYLQYWFLLSFL 203
           L Y+N T+  +  +LVG++  F  F   + W+LLS+L
Sbjct: 367 LRYLNSTVLNWLKVLVGFIPAFLTFSLTKDWWLLSYL 403


>UniRef50_P83119 Cluster: Probable G-protein coupled receptor
           Mth-like 12 precursor; n=1; Drosophila melanogaster|Rep:
           Probable G-protein coupled receptor Mth-like 12
           precursor - Drosophila melanogaster (Fruit fly)
          Length = 488

 Score = 33.9 bits (74), Expect = 2.5
 Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
 Frame = +3

Query: 171 YLQYWFLLSFLMSVALNAPTLWTAFKTTEAHEVVYEMKLFQAMYFSNVLL-NYVVFSDNQ 347
           Y++Y+F +S  +  ++ +  LW  F +   HE  Y   ++    +    +   V+FS NQ
Sbjct: 280 YMKYFFSMSSYLWFSVVSFHLWELFTSLNRHEPQYRFLIYNTFVWCTAAIPTVVIFSMNQ 339

Query: 348 MGTN 359
           M  N
Sbjct: 340 MWEN 343


>UniRef50_Q91GT9 Cluster: LAMP; n=3; Human herpesvirus 8|Rep: LAMP -
           Human herpesvirus 8 (HHV-8) (Kaposi's sarcoma-associated
           herpesvirus)
          Length = 498

 Score = 33.5 bits (73), Expect = 3.3
 Identities = 17/44 (38%), Positives = 21/44 (47%)
 Frame = +3

Query: 18  WVCLRCCTKYTRLSTDTKVKFPYAALSYINVTLCTYTAMLVGYM 149
           W C  CC K   L TD       + L  + V L T  A+LVGY+
Sbjct: 309 WTCAGCCVKLVLLYTDGWTTGVTSGLICVIVILSTGQAVLVGYL 352


>UniRef50_UPI00006CA6E0 Cluster: hypothetical protein
           TTHERM_00683140; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00683140 - Tetrahymena
           thermophila SB210
          Length = 313

 Score = 33.1 bits (72), Expect = 4.4
 Identities = 24/94 (25%), Positives = 48/94 (51%)
 Frame = +3

Query: 111 TLCTYTAMLVGYMATFNEFEYLQYWFLLSFLMSVALNAPTLWTAFKTTEAHEVVYEMKLF 290
           +L    ++ +   +TFN+FE LQ   +L  + S++ N  +L  +FK  + +   + + + 
Sbjct: 200 SLTKIESLSINMSSTFNQFEQLQIQSILHSIQSLS-NLHSLKISFKNCKLN--THFLPIL 256

Query: 291 QAMYFSNVLLNYVVFSDNQMGTNFVFVNNLIHCC 392
           +  + SN+  N +VF D  +  N +FV  +   C
Sbjct: 257 K-QFLSNIAAN-MVFLDLDISYNPLFVKRITFYC 288


>UniRef50_A2Y5Q5 Cluster: Putative uncharacterized protein; n=2;
           Oryza sativa|Rep: Putative uncharacterized protein -
           Oryza sativa subsp. indica (Rice)
          Length = 420

 Score = 33.1 bits (72), Expect = 4.4
 Identities = 24/60 (40%), Positives = 31/60 (51%), Gaps = 6/60 (10%)
 Frame = +3

Query: 78  FPYAALSYINVTLCTYTAMLVGY--MATFNEFEYLQYWFLLSFL---MSVALNAPTL-WT 239
           FP A    + V      AML     MAT    E+LQ+WF+LS L   ++VALN   + WT
Sbjct: 235 FPSARARAVAVAGHLNRAMLAALVSMATILAVEFLQWWFMLSLLPEAIAVALNVAIMAWT 294


>UniRef50_A2F5D1 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 320

 Score = 32.7 bits (71), Expect = 5.8
 Identities = 17/78 (21%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
 Frame = +3

Query: 93  LSYINVTLCTYTAMLVGYMATFNEFEYLQYW--FLLSFLMSVALNAPTLWTAFKTTEAHE 266
           L+++ ++   ++++ V Y  +  +FE  +Y+    +S L++VA+   T +++FK TE+ +
Sbjct: 27  LTFLQLSSFLFSSIYVVYRISKKQFELSRYYNVIFISILVTVAMIL-TNYSSFKLTESTQ 85

Query: 267 VVYEMKLFQAMYFSNVLL 320
           +++       +  SN+ +
Sbjct: 86  ILFRSPRLIPIMISNIFI 103


>UniRef50_Q89C13 Cluster: Sensor protein; n=5; cellular
           organisms|Rep: Sensor protein - Bradyrhizobium japonicum
          Length = 764

 Score = 32.3 bits (70), Expect = 7.6
 Identities = 16/46 (34%), Positives = 24/46 (52%)
 Frame = +3

Query: 123 YTAMLVGYMATFNEFEYLQYWFLLSFLMSVALNAPTLWTAFKTTEA 260
           YT M    MA     +Y   W +LS L++++ +   LW AF+ T A
Sbjct: 123 YTGMAAMRMAAL--IQYDPRWVVLSILIAISASIVALWLAFRNTNA 166


>UniRef50_Q7UM72 Cluster: Putative uncharacterized protein; n=1;
           Pirellula sp.|Rep: Putative uncharacterized protein -
           Rhodopirellula baltica
          Length = 118

 Score = 32.3 bits (70), Expect = 7.6
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +1

Query: 139 WDTWQHSTNLNIYNTGFCCRF*CPWR 216
           W+ W+ S N  ++N  F CR  C WR
Sbjct: 21  WNYWRTSWNKRVFNRPFTCRPGCTWR 46


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 528,400,037
Number of Sequences: 1657284
Number of extensions: 10090380
Number of successful extensions: 23817
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 23078
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23810
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 35822246242
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)