Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc7h09
(608 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB095514-1|BAC76336.1| 72|Apis mellifera ecdyson receptor prot... 22 4.1
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 22 5.4
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 22 5.4
DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor pro... 21 7.1
DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor pro... 21 7.1
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 21 7.1
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 21 7.1
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 21 7.1
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 21 7.1
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 21 7.1
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 21 7.1
AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled rec... 21 7.1
AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor ... 21 7.1
AB013288-1|BAA87894.1| 149|Apis mellifera protein kinase C prot... 21 9.4
>AB095514-1|BAC76336.1| 72|Apis mellifera ecdyson receptor
protein.
Length = 72
Score = 22.2 bits (45), Expect = 4.1
Identities = 8/34 (23%), Positives = 16/34 (47%)
Frame = +2
Query: 410 KCTSCVIKQRGCFNCRKFCCTSGWRCCLSPRERR 511
KC C +K+ R C ++C + +E++
Sbjct: 35 KCQECRLKKCLTVGMRPECMVPEYQCAVKRKEKK 68
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 21.8 bits (44), Expect = 5.4
Identities = 7/16 (43%), Positives = 8/16 (50%)
Frame = +2
Query: 479 WRCCLSPRERRICFNP 526
WR C +P R C P
Sbjct: 136 WRTCGNPWNTRYCLTP 151
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 21.8 bits (44), Expect = 5.4
Identities = 7/16 (43%), Positives = 8/16 (50%)
Frame = +2
Query: 479 WRCCLSPRERRICFNP 526
WR C +P R C P
Sbjct: 189 WRTCGNPWNTRYCLTP 204
>DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 21.4 bits (43), Expect = 7.1
Identities = 9/33 (27%), Positives = 19/33 (57%)
Frame = +2
Query: 224 RDQP*ASAKPAVLESKPSFLVLCSEIETVQKRT 322
R P + AKP++++ +P+ + + T +RT
Sbjct: 263 RSTPRSHAKPSLIDDEPTEVTIGGGGTTSSRRT 295
Score = 21.4 bits (43), Expect = 7.1
Identities = 6/7 (85%), Positives = 6/7 (85%)
Frame = -1
Query: 572 PDCCPPD 552
PDCCP D
Sbjct: 354 PDCCPSD 360
>DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 21.4 bits (43), Expect = 7.1
Identities = 9/33 (27%), Positives = 19/33 (57%)
Frame = +2
Query: 224 RDQP*ASAKPAVLESKPSFLVLCSEIETVQKRT 322
R P + AKP++++ +P+ + + T +RT
Sbjct: 263 RSTPRSHAKPSLIDDEPTEVTIGGGGTTSSRRT 295
Score = 21.4 bits (43), Expect = 7.1
Identities = 6/7 (85%), Positives = 6/7 (85%)
Frame = -1
Query: 572 PDCCPPD 552
PDCCP D
Sbjct: 354 PDCCPSD 360
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.4 bits (43), Expect = 7.1
Identities = 12/37 (32%), Positives = 16/37 (43%)
Frame = -1
Query: 212 PE*IPQYLGVFPPSHWLSFFRISTMV*SLDNIKLITP 102
P +P Y G FPP S+ I + +I TP
Sbjct: 113 PVPVPVYYGNFPPRPMGSWISIQEQIPRFRHIGPSTP 149
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.4 bits (43), Expect = 7.1
Identities = 12/37 (32%), Positives = 16/37 (43%)
Frame = -1
Query: 212 PE*IPQYLGVFPPSHWLSFFRISTMV*SLDNIKLITP 102
P +P Y G FPP S+ I + +I TP
Sbjct: 113 PVPVPVYYGNFPPRPMGSWISIQEQIPRFRHIGPSTP 149
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.4 bits (43), Expect = 7.1
Identities = 12/37 (32%), Positives = 16/37 (43%)
Frame = -1
Query: 212 PE*IPQYLGVFPPSHWLSFFRISTMV*SLDNIKLITP 102
P +P Y G FPP S+ I + +I TP
Sbjct: 113 PVPVPVYYGNFPPRPMGSWISIQEQIPRFRHIGPSTP 149
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.4 bits (43), Expect = 7.1
Identities = 12/37 (32%), Positives = 16/37 (43%)
Frame = -1
Query: 212 PE*IPQYLGVFPPSHWLSFFRISTMV*SLDNIKLITP 102
P +P Y G FPP S+ I + +I TP
Sbjct: 113 PVPVPVYYGNFPPRPMGSWISIQEQIPRFRHIGPSTP 149
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.4 bits (43), Expect = 7.1
Identities = 12/37 (32%), Positives = 16/37 (43%)
Frame = -1
Query: 212 PE*IPQYLGVFPPSHWLSFFRISTMV*SLDNIKLITP 102
P +P Y G FPP S+ I + +I TP
Sbjct: 113 PVPVPVYYGNFPPRPMGSWISIQEQIPRFRHIGPSTP 149
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 21.4 bits (43), Expect = 7.1
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = -3
Query: 450 LKHPRCLITQEVH 412
L HP C I ++VH
Sbjct: 400 LHHPNCKINRKVH 412
>AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled
receptor protein.
Length = 399
Score = 21.4 bits (43), Expect = 7.1
Identities = 9/33 (27%), Positives = 19/33 (57%)
Frame = +2
Query: 224 RDQP*ASAKPAVLESKPSFLVLCSEIETVQKRT 322
R P + AKP++++ +P+ + + T +RT
Sbjct: 263 RSTPRSHAKPSLIDDEPTEVTIGGGGTTSSRRT 295
Score = 21.4 bits (43), Expect = 7.1
Identities = 6/7 (85%), Positives = 6/7 (85%)
Frame = -1
Query: 572 PDCCPPD 552
PDCCP D
Sbjct: 354 PDCCPSD 360
>AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor A
isoform protein.
Length = 567
Score = 21.4 bits (43), Expect = 7.1
Identities = 8/34 (23%), Positives = 15/34 (44%)
Frame = +2
Query: 410 KCTSCVIKQRGCFNCRKFCCTSGWRCCLSPRERR 511
KC C +K+ R C ++C + +E +
Sbjct: 238 KCQECRLKKCLTVGMRPECVVPEYQCAVKRKEEK 271
>AB013288-1|BAA87894.1| 149|Apis mellifera protein kinase C
protein.
Length = 149
Score = 21.0 bits (42), Expect = 9.4
Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Frame = +3
Query: 336 VKIKKKDVLVETDQ-PC-QLDVSVESLNALPALL 431
+KI KKD++++ D C ++ V +L+ P L
Sbjct: 14 IKILKKDIIIQDDDVECTMVEKRVLALSTKPPFL 47
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,230
Number of Sequences: 438
Number of extensions: 3438
Number of successful extensions: 20
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17971191
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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