Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc7h03
(407 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bomb... 46 4e-04
UniRef50_Q00X14 Cluster: WD40 repeat-containing protein; n=2; Os... 35 0.73
UniRef50_A2G945 Cluster: Putative uncharacterized protein; n=1; ... 35 0.73
UniRef50_Q86631 Cluster: Polyprotein; n=1; Cherry leaf roll viru... 34 1.3
UniRef50_Q5LJI9 Cluster: Putative uncharacterized protein; n=1; ... 33 1.7
UniRef50_Q7TQC0 Cluster: DNA polymerase Q; n=17; Tetrapoda|Rep: ... 33 2.2
UniRef50_Q6Z5S6 Cluster: Putative uncharacterized protein OSJNBa... 33 2.9
UniRef50_Q5NPY0 Cluster: Sensor protein; n=1; Zymomonas mobilis|... 32 5.1
UniRef50_Q33565 Cluster: CR3 protein; n=2; Trypanosoma brucei|Re... 31 6.8
UniRef50_UPI0000E45C96 Cluster: PREDICTED: hypothetical protein,... 31 8.9
UniRef50_Q5MYB9 Cluster: Schnurri 1; n=2; Xenopus|Rep: Schnurri ... 31 8.9
UniRef50_Q64ER6 Cluster: UL135; n=26; Human herpesvirus 5|Rep: U... 31 8.9
UniRef50_Q9SR96 Cluster: Putative DnaJ protein; n=1; Arabidopsis... 31 8.9
>UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bombyx
mori (Silk moth)
Length = 782
Score = 45.6 bits (103), Expect = 4e-04
Identities = 21/37 (56%), Positives = 26/37 (70%)
Frame = -2
Query: 169 SSITTKTSMSELTHRHSPLSFSPDLLSGSRFRSGGRF 59
+S+ T +E HR PLSFSPDLLSGSRFR+G +
Sbjct: 379 ASLKTTGHSTENEHRCCPLSFSPDLLSGSRFRTGAEY 415
>UniRef50_Q00X14 Cluster: WD40 repeat-containing protein; n=2;
Ostreococcus|Rep: WD40 repeat-containing protein -
Ostreococcus tauri
Length = 591
Score = 34.7 bits (76), Expect = 0.73
Identities = 21/63 (33%), Positives = 29/63 (46%)
Frame = -2
Query: 253 PPSPEICLVGSPGFTVGAFRTLKHWSPSSSITTKTSMSELTHRHSPLSFSPDLLSGSRFR 74
PPSP G P F+ A +LKH P + T +S SP+ F + +SG +
Sbjct: 316 PPSPSTSPTGEPAFSRSARLSLKHDIPCVMLVTPLELSRGVRFGSPMGF--EGISGLAYS 373
Query: 73 SGG 65
S G
Sbjct: 374 SKG 376
>UniRef50_A2G945 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 374
Score = 34.7 bits (76), Expect = 0.73
Identities = 24/65 (36%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Frame = -2
Query: 271 FRGNAKPPSPEICLVGS-PGFTVGAFRTLKHWSPSSSITTKTSMSELTHRHSPLSFSPDL 95
FR + SP S P FT +SPS T++S S + HSPLS SP
Sbjct: 6 FRSPRRSKSPSTTTFSSSPKFTNSPSVGRDRFSPSHRSPTRSSSSSSSSPHSPLSSSPRC 65
Query: 94 LSGSR 80
S SR
Sbjct: 66 SSSSR 70
>UniRef50_Q86631 Cluster: Polyprotein; n=1; Cherry leaf roll
virus|Rep: Polyprotein - Cherry leaf roll virus
Length = 545
Score = 33.9 bits (74), Expect = 1.3
Identities = 18/54 (33%), Positives = 27/54 (50%)
Frame = -2
Query: 232 LVGSPGFTVGAFRTLKHWSPSSSITTKTSMSELTHRHSPLSFSPDLLSGSRFRS 71
LV S G G R + W+ +SS+TT T+ +L H+ + S L+ R S
Sbjct: 469 LVASRGMFQGTMRFILRWTFASSLTTPTTYVQLVHKFGTTTSSESYLTKLRHAS 522
>UniRef50_Q5LJI9 Cluster: Putative uncharacterized protein; n=1;
Hordeum vulgare|Rep: Putative uncharacterized protein -
Hordeum vulgare (Barley)
Length = 247
Score = 33.5 bits (73), Expect = 1.7
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +3
Query: 144 IEVFVVIDEDGDQCLRVLKAPTVNPGDPTRHISGDGGFALPR 269
+++ + +DEDGDQ VL+ P +P P +G G F PR
Sbjct: 8 LDLLLSLDEDGDQA--VLETPPSSPSRPAAASAGYGAFTPPR 47
>UniRef50_Q7TQC0 Cluster: DNA polymerase Q; n=17; Tetrapoda|Rep: DNA
polymerase Q - Mus musculus (Mouse)
Length = 2587
Score = 33.1 bits (72), Expect = 2.2
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Frame = -2
Query: 274 KFRGNAKPPSPEICLV---GSPGFTVGAFR-TLKHWSPSSSITTKTSMSELTHRHSPLSF 107
KF+GN +P +P IC S G R +LK PS+ +T SE T R + LSF
Sbjct: 1009 KFQGNFEPQTPSICTARKRTSLGINKEMLRKSLKEGKPSTKEVLQTFSSEKT-RKTALSF 1067
Query: 106 SPDLLSGS 83
S + ++ +
Sbjct: 1068 SSEQVNNT 1075
>UniRef50_Q6Z5S6 Cluster: Putative uncharacterized protein
OSJNBa0026I22.14; n=3; Oryza sativa|Rep: Putative
uncharacterized protein OSJNBa0026I22.14 - Oryza sativa
subsp. japonica (Rice)
Length = 241
Score = 32.7 bits (71), Expect = 2.9
Identities = 21/53 (39%), Positives = 26/53 (49%)
Frame = -2
Query: 220 PGFTVGAFRTLKHWSPSSSITTKTSMSELTHRHSPLSFSPDLLSGSRFRSGGR 62
P FT+ A H PSSS +TS S +H +S SPD + SR R R
Sbjct: 114 PDFTLAA-AAAAHRHPSSSAAPETSASCHSHSNSRADASPDRAAASRARGRQR 165
>UniRef50_Q5NPY0 Cluster: Sensor protein; n=1; Zymomonas
mobilis|Rep: Sensor protein - Zymomonas mobilis
Length = 811
Score = 31.9 bits (69), Expect = 5.1
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = -1
Query: 404 FFCIFAFYCITG--KCVLLKCTIYFFVTSFVKLICIKFLIKINLHKIS 267
FFC F F + G + + L YF +T F+ L K I N+H S
Sbjct: 30 FFCFFVFGWVIGDLRLLFLSLATYFGITFFILLSRKKTFISPNIHSTS 77
>UniRef50_Q33565 Cluster: CR3 protein; n=2; Trypanosoma brucei|Rep:
CR3 protein - Trypanosoma brucei
Length = 70
Score = 31.5 bits (68), Expect = 6.8
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -1
Query: 407 FFFCIFAFYCITGKCVLLKCTIYFFVTSFVKLICIKFLI 291
F FC +C LL C +FF+ SF I + F+I
Sbjct: 32 FSFCFLLDFCFLFNMGLLLCLFFFFILSFDMCIKLLFII 70
>UniRef50_UPI0000E45C96 Cluster: PREDICTED: hypothetical protein,
partial; n=2; Strongylocentrotus purpuratus|Rep:
PREDICTED: hypothetical protein, partial -
Strongylocentrotus purpuratus
Length = 1146
Score = 31.1 bits (67), Expect = 8.9
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = -2
Query: 256 KPPSPEICLVGSPGFTVGAFRTLKHWSPSSSITTKTSMSELTHRHSPLSFSP 101
K PSP+ C +P + + SP ++TT T +S L H +SP+ SP
Sbjct: 270 KRPSPQSCTPATPKINSPRKQAIIRGSPKKAVTTVT-LSPLKH-NSPIKNSP 319
>UniRef50_Q5MYB9 Cluster: Schnurri 1; n=2; Xenopus|Rep: Schnurri 1 -
Xenopus laevis (African clawed frog)
Length = 2578
Score = 31.1 bits (67), Expect = 8.9
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = -2
Query: 262 NAKPPSPEICLVGSPGFTVGAFRTLKHWSPSSSITTKTSMSELTHRHSPL 113
N PS E+ S F G+ + SP++S+T+K S L+ + PL
Sbjct: 1319 NCTQPSMEVIEYRSKSFDCGSMSRSRSMSPTNSVTSKFQSSMLSSANVPL 1368
>UniRef50_Q64ER6 Cluster: UL135; n=26; Human herpesvirus 5|Rep:
UL135 - Human cytomegalovirus (HHV-5) (Human herpesvirus
5)
Length = 328
Score = 31.1 bits (67), Expect = 8.9
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = -2
Query: 253 PPSP-EICLVGSPGFTVGAFRTLKHWSPSSSITTKTSMSELTHRHSPLSFSPDLLSGSRF 77
PP+ EI V +PG R+ H S SSS+++ TS+ + H+ P S+ P G +
Sbjct: 129 PPARFEIPDVSTPGTPTSIGRSPSHCSSSSSLSSSTSVDTVLHQPPP-SWKPPPPPGRKK 187
Query: 76 R 74
R
Sbjct: 188 R 188
>UniRef50_Q9SR96 Cluster: Putative DnaJ protein; n=1; Arabidopsis
thaliana|Rep: Putative DnaJ protein - Arabidopsis
thaliana (Mouse-ear cress)
Length = 572
Score = 31.1 bits (67), Expect = 8.9
Identities = 18/59 (30%), Positives = 28/59 (47%)
Frame = -2
Query: 259 AKPPSPEICLVGSPGFTVGAFRTLKHWSPSSSITTKTSMSELTHRHSPLSFSPDLLSGS 83
++P IC +P +GAFR+ SI +K S L+ R + + S D +S S
Sbjct: 441 SRPNFDSICGENTPVCIIGAFRSSNGKEKLQSIMSKVSQKSLSRRQASTTGSQDTVSYS 499
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 380,195,797
Number of Sequences: 1657284
Number of extensions: 7054305
Number of successful extensions: 18889
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 18428
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18879
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 18196175969
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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