Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc7h03
         (407 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    27   0.054
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    26   0.12 
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    21   4.6  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    21   4.6  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    21   6.1  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   6.1  
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    20   8.1  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    20   8.1  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    20   8.1  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    20   8.1  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 27.5 bits (58), Expect = 0.054
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = -1

Query: 407 FFFCIFAFYCITGKCVLLKCTIYFFVTSFV 318
           F  CI+ FYC     ++L C IY+F  +F+
Sbjct: 281 FLLCIYYFYC---ALIILLC-IYYFCRAFI 306



 Score = 25.8 bits (54), Expect = 0.16
 Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 8/52 (15%)
 Frame = -1

Query: 407 FFFCIFAFYC----ITGKCVLLKCTIYFFVTSFV----KLICIKFLIKINLH 276
           F  CI+ FYC     T   + L C  +FF    +     L C  F+   N+H
Sbjct: 142 FLLCIYYFYCAFIIFTVHLLFLLCIYHFFCAFIIFTMHLLFCCAFIF-FNMH 192



 Score = 25.0 bits (52), Expect = 0.29
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = -1

Query: 401 FCIFAFYCITGKCVLLKCTIYFFVTSFVKLICIKFLIK 288
           FC  AF   T   + L C IY+F  + + L+CI +  +
Sbjct: 268 FCC-AFIIFTMHLLFLLC-IYYFYCALIILLCIYYFCR 303



 Score = 24.6 bits (51), Expect = 0.38
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = -1

Query: 404 FFCIFAFYCITGKCVLLKCTIYFFVTSFVKLICIKF 297
           ++  +AF   T   + L C  YF V  F  L+CI +
Sbjct: 114 YYFYYAFIIFTVHLLFLLCIYYFVVPLFF-LLCIYY 148



 Score = 24.6 bits (51), Expect = 0.38
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = -1

Query: 404 FFCIFAFYCITGKCVLLKCTIYFFVTSFVKLICIKFLI 291
           ++  +AF   T   +LL C  YF+      L C  F+I
Sbjct: 239 YYFYYAFILFTVHLLLLVCIYYFYYMHL--LFCCAFII 274



 Score = 23.4 bits (48), Expect = 0.87
 Identities = 11/41 (26%), Positives = 19/41 (46%)
 Frame = -1

Query: 407 FFFCIFAFYCITGKCVLLKCTIYFFVTSFVKLICIKFLIKI 285
           F  C + FY      ++L C  YF+    +  + + FL+ I
Sbjct: 96  FLLCTYYFYYAF---IILLCVYYFYYAFIIFTVHLLFLLCI 133


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 26.2 bits (55), Expect = 0.12
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -1

Query: 383 YCITGKCVLLKCTIYFFVTSFVKL 312
           Y I G   +LKC I  FV  FV++
Sbjct: 133 YVIRGNTAVLKCNIPSFVADFVRV 156


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -3

Query: 87  GRDSDPVVDSAKHCSC 40
           GR   P V++ KH SC
Sbjct: 342 GRKVSPRVNTIKHTSC 357


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -3

Query: 87  GRDSDPVVDSAKHCSC 40
           GR   P V++ KH SC
Sbjct: 342 GRKVSPRVNTIKHTSC 357


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 20.6 bits (41), Expect = 6.1
 Identities = 11/34 (32%), Positives = 14/34 (41%)
 Frame = -2

Query: 166 SITTKTSMSELTHRHSPLSFSPDLLSGSRFRSGG 65
           S+    SM  L    SPL   PD  +  +F   G
Sbjct: 9   SLDQNLSMGSLGAPQSPLDMKPDASTLGQFSPQG 42


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 20.6 bits (41), Expect = 6.1
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = +3

Query: 255 FALPRNFMQINFDQKFYAN*FYKT 326
           F + +N   INF   F+   FY T
Sbjct: 349 FEMTQNSTNINFVSTFFKIPFYST 372


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 20.2 bits (40), Expect = 8.1
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -2

Query: 271 FRGNAKPPSPE 239
           FRG++ P SPE
Sbjct: 98  FRGSSTPESPE 108


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 20.2 bits (40), Expect = 8.1
 Identities = 5/20 (25%), Positives = 14/20 (70%)
 Frame = -3

Query: 357 FKMYYIFFCH*FCKINLHKI 298
           F ++Y+F+C+   K +++ +
Sbjct: 14  FLLFYLFYCYKTIKQHIYSL 33


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 20.2 bits (40), Expect = 8.1
 Identities = 5/15 (33%), Positives = 11/15 (73%)
 Frame = -3

Query: 399  LYICLLLHNREVCSF 355
            ++IC L+H +++  F
Sbjct: 1172 IWICSLIHRKKIVKF 1186


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 20.2 bits (40), Expect = 8.1
 Identities = 5/20 (25%), Positives = 14/20 (70%)
 Frame = -3

Query: 357 FKMYYIFFCH*FCKINLHKI 298
           F ++Y+F+C+   K +++ +
Sbjct: 14  FLLFYLFYCYKTIKQHIYSL 33


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,780
Number of Sequences: 336
Number of extensions: 1969
Number of successful extensions: 17
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8857716
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)