Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc7g20
         (114 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    19   5.6  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          19   7.4  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      19   7.4  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    19   7.4  
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    18   9.7  
DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    18   9.7  

>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like
          receptor 2 protein.
          Length = 581

 Score = 19.0 bits (37), Expect = 5.6
 Identities = 7/26 (26%), Positives = 13/26 (50%)
 Frame = -1

Query: 84 DHFKMLLSNACVFKQYTDTFRSIVQE 7
          +H + L+SN  +   YT      +Q+
Sbjct: 15 NHKEQLISNDYILDNYTSPIVEFLQQ 40


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 18.6 bits (36), Expect = 7.4
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = -2

Query: 68  FYQTLAYSN 42
           FY T+ YSN
Sbjct: 297 FYSTIMYSN 305


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 18.6 bits (36), Expect = 7.4
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = -2

Query: 68  FYQTLAYSN 42
           FY T+ YSN
Sbjct: 297 FYSTIMYSN 305


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 18.6 bits (36), Expect = 7.4
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = +2

Query: 17  IERKVSVYCLNTQAFDKSILK 79
           +E K ++  +N Q+F+  +LK
Sbjct: 875 LELKKALSSINEQSFNHFVLK 895


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 18.2 bits (35), Expect = 9.7
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +2

Query: 44  LNTQAFDKSILK 79
           LNTQ+F K + K
Sbjct: 305 LNTQSFGKVVSK 316


>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 18.2 bits (35), Expect = 9.7
 Identities = 5/10 (50%), Positives = 7/10 (70%)
 Frame = +1

Query: 67  KHFKVILTWL 96
           +HF  I+ WL
Sbjct: 402 RHFAAIIEWL 411


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,542
Number of Sequences: 438
Number of extensions: 224
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 18
effective length of database: 138,459
effective search space used:  2630721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)