Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc7g19
         (276 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U40413-5|AAK39175.1|  599|Caenorhabditis elegans Hypothetical pr...    26   3.3  
Z93785-1|CAB07858.1|  495|Caenorhabditis elegans Hypothetical pr...    26   4.4  
Z81112-6|CAB03277.1|  673|Caenorhabditis elegans Hypothetical pr...    25   5.8  
Z77136-10|CAB00887.1|  673|Caenorhabditis elegans Hypothetical p...    25   5.8  
Z83316-2|CAB05891.1|  226|Caenorhabditis elegans Hypothetical pr...    25   7.7  
U97016-2|ABC71840.1|  216|Caenorhabditis elegans Hypothetical pr...    25   7.7  
U97016-1|ABC71839.1|  234|Caenorhabditis elegans Hypothetical pr...    25   7.7  

>U40413-5|AAK39175.1|  599|Caenorhabditis elegans Hypothetical
           protein C18B2.6 protein.
          Length = 599

 Score = 26.2 bits (55), Expect = 3.3
 Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 3/44 (6%)
 Frame = -2

Query: 155 CQS*AKVAC-PWN--AQAGYQSEGVWKKRKHRPRREWPKRQKRL 33
           C+   K  C  WN   Q  Y S      +K  PR EW K ++++
Sbjct: 429 CKKECKAPCHAWNYNKQVSYSSIPSEASKKLLPREEWEKMKRKI 472


>Z93785-1|CAB07858.1|  495|Caenorhabditis elegans Hypothetical
           protein W09D10.1 protein.
          Length = 495

 Score = 25.8 bits (54), Expect = 4.4
 Identities = 13/31 (41%), Positives = 21/31 (67%)
 Frame = +2

Query: 41  SAASAIPSLVDAFSSSKPPQTDTPPARSMDM 133
           SAA+A PSL+D    S PP + TP  +++++
Sbjct: 175 SAAAAAPSLLDF---SDPPASTTPAKKAVNL 202


>Z81112-6|CAB03277.1|  673|Caenorhabditis elegans Hypothetical
           protein ZC376.3 protein.
          Length = 673

 Score = 25.4 bits (53), Expect = 5.8
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 186 RLLRPRSDLPWDGLL 230
           R  +PR  +PWDG+L
Sbjct: 62  RFRKPRPPIPWDGIL 76


>Z77136-10|CAB00887.1|  673|Caenorhabditis elegans Hypothetical
           protein ZC376.3 protein.
          Length = 673

 Score = 25.4 bits (53), Expect = 5.8
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 186 RLLRPRSDLPWDGLL 230
           R  +PR  +PWDG+L
Sbjct: 62  RFRKPRPPIPWDGIL 76


>Z83316-2|CAB05891.1|  226|Caenorhabditis elegans Hypothetical
           protein B0379.2 protein.
          Length = 226

 Score = 25.0 bits (52), Expect = 7.7
 Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = +2

Query: 14  MEEIVPLVVSAAS-AIPSLVDAFSSSKPPQTDTPPARSMDM 133
           ME I+ ++V     A   L  AF +SKP +    PAR + M
Sbjct: 1   MESILQIIVKCFPIATFILFAAFCASKPKEVRRSPARKLTM 41


>U97016-2|ABC71840.1|  216|Caenorhabditis elegans Hypothetical
          protein B0261.4b protein.
          Length = 216

 Score = 25.0 bits (52), Expect = 7.7
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -2

Query: 77 KHRPRREWPKRQKRLKA 27
          KHRP R W   + RLK+
Sbjct: 45 KHRPGRSWTAEELRLKS 61


>U97016-1|ABC71839.1|  234|Caenorhabditis elegans Hypothetical
           protein B0261.4a protein.
          Length = 234

 Score = 25.0 bits (52), Expect = 7.7
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -2

Query: 77  KHRPRREWPKRQKRLKA 27
           KHRP R W   + RLK+
Sbjct: 63  KHRPGRSWTAEELRLKS 79


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,622,917
Number of Sequences: 27780
Number of extensions: 59212
Number of successful extensions: 263
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 261
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 263
length of database: 12,740,198
effective HSP length: 69
effective length of database: 10,823,378
effective search space used: 238114316
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)