BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc7g15
(687 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49833-1|CAA89994.1| 250|Anopheles gambiae serine proteinase pr... 27 0.73
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein. 25 1.7
L04753-1|AAA29357.1| 511|Anopheles gambiae alpha-amylase protein. 25 2.2
AY263177-1|AAP78792.1| 699|Anopheles gambiae TmcC-like protein ... 24 3.9
AJ618923-1|CAF02002.1| 155|Anopheles gambiae odorant-binding pr... 24 3.9
DQ219483-1|ABB29887.1| 961|Anopheles gambiae cryptochrome 2 pro... 23 9.0
AJ439353-7|CAD27929.1| 555|Anopheles gambiae putative glycerol ... 23 9.0
>Z49833-1|CAA89994.1| 250|Anopheles gambiae serine proteinase
protein.
Length = 250
Score = 26.6 bits (56), Expect = 0.73
Identities = 17/60 (28%), Positives = 31/60 (51%)
Frame = -1
Query: 246 PFFQVIYYGKQTLVTAQILVDCHNRQAH*AKCVAIFVRTKFYEKFVVHDVLRPFFQQDTF 67
P+ +YY + + ++ D + A A CV R++F KF++HD P ++D+F
Sbjct: 22 PWMVALYYNNRFICGGSLINDRYVLTA--AHCVFGSDRSRFSVKFLMHDRTVP--KEDSF 77
>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
Length = 3320
Score = 25.4 bits (53), Expect = 1.7
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +1
Query: 172 SVVTINEYLCCDKCL 216
S+ TINEY C KC+
Sbjct: 3305 SMATINEYRVCSKCV 3319
>L04753-1|AAA29357.1| 511|Anopheles gambiae alpha-amylase protein.
Length = 511
Score = 25.0 bits (52), Expect = 2.2
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +1
Query: 319 GATFGDNEKLIWIHRFRIAW 378
G FG N+ L W+ F AW
Sbjct: 283 GRAFGGNDALRWLSNFGEAW 302
>AY263177-1|AAP78792.1| 699|Anopheles gambiae TmcC-like protein
protein.
Length = 699
Score = 24.2 bits (50), Expect = 3.9
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = -1
Query: 198 QILVDCHNRQAH*AKCVAIFVRTKFYEKFVV 106
Q+ C++ Q +C FV +FY+ F+V
Sbjct: 370 QLPTQCYDEQNGAPQCWETFVGQQFYKLFIV 400
>AJ618923-1|CAF02002.1| 155|Anopheles gambiae odorant-binding
protein OBPjj5c protein.
Length = 155
Score = 24.2 bits (50), Expect = 3.9
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -1
Query: 156 KCVAIFVRTKFYEKFVVHDVLRPFFQQDTFIFVICT 49
KC I V FY + V +++ P +F F+ CT
Sbjct: 80 KCYIITVGDSFYLRDVAKNLISPQCIPSSFRFLQCT 115
>DQ219483-1|ABB29887.1| 961|Anopheles gambiae cryptochrome 2
protein.
Length = 961
Score = 23.0 bits (47), Expect = 9.0
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +3
Query: 39 VPKLYKSQI*KCLVEKMDARRHGQRTSHRISSVQK 143
+PKL+K CL + D G+ H IS + K
Sbjct: 85 LPKLFKEWGTTCLTFEEDPEPFGRVRDHNISEMCK 119
>AJ439353-7|CAD27929.1| 555|Anopheles gambiae putative glycerol
kinase protein.
Length = 555
Score = 23.0 bits (47), Expect = 9.0
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = -1
Query: 291 QKHKHVQLLSRRQLSPFFQVI 229
Q H H + LS +SP+F +
Sbjct: 130 QNHNHFRALSGLPISPYFSAL 150
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 710,867
Number of Sequences: 2352
Number of extensions: 15773
Number of successful extensions: 35
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69413730
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -