Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc7g14
         (392 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q6LFH6 Cluster: Putative uncharacterized protein; n=1; ...    33   2.6  
UniRef50_UPI0000E7FB02 Cluster: PREDICTED: similar to claudin 14...    31   6.0  

>UniRef50_Q6LFH6 Cluster: Putative uncharacterized protein; n=1;
            Plasmodium falciparum 3D7|Rep: Putative uncharacterized
            protein - Plasmodium falciparum (isolate 3D7)
          Length = 6077

 Score = 32.7 bits (71), Expect = 2.6
 Identities = 22/61 (36%), Positives = 30/61 (49%)
 Frame = +3

Query: 3    YTSFTYSTE*INIKXQKKTXDFAFTKINLI*NLFEFCCGICVFIPIISYFYCNIGKYVKF 182
            +  F Y T+ +NI   K T    F KI+     F     + +FIPII Y   NI KYV+ 
Sbjct: 4159 FNVFYYITQHVNIHKLKDTEKILFYKIS-----FHM---LNIFIPIIDYILNNIDKYVEC 4210

Query: 183  Y 185
            +
Sbjct: 4211 F 4211


>UniRef50_UPI0000E7FB02 Cluster: PREDICTED: similar to claudin 14b;
           n=3; Gallus gallus|Rep: PREDICTED: similar to claudin
           14b - Gallus gallus
          Length = 210

 Score = 31.5 bits (68), Expect = 6.0
 Identities = 16/50 (32%), Positives = 26/50 (52%)
 Frame = +3

Query: 6   TSFTYSTE*INIKXQKKTXDFAFTKINLI*NLFEFCCGICVFIPIISYFY 155
           T+  Y+   I++   +KT   + T+  L+   F  C G+CV IP+   FY
Sbjct: 107 TATIYALRNISMGISRKT---SITRFFLVGGCFYVCAGLCVLIPVSHNFY 153


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 310,828,778
Number of Sequences: 1657284
Number of extensions: 5131699
Number of successful extensions: 8579
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 8466
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8578
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 16080341554
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)