Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc7g14
         (392 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052026-1|AAK93450.1|  412|Drosophila melanogaster LD47625p pro...    27   6.7  
AE014296-544|AAF47711.2|  412|Drosophila melanogaster CG32486-PD...    27   6.7  

>AY052026-1|AAK93450.1|  412|Drosophila melanogaster LD47625p
           protein.
          Length = 412

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 12/45 (26%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
 Frame = +3

Query: 111 CCGICVFIPIISYFYCNIGKYVKFYC*KYILTS*KL---IQLCTN 236
           CC +C+ +P  + + C +G  +   C  ++L   +L   I  C N
Sbjct: 112 CCAVCLDLPKTAMYQCQMGHLMCAACFTHLLADGRLRDQIATCPN 156


>AE014296-544|AAF47711.2|  412|Drosophila melanogaster CG32486-PD
           protein.
          Length = 412

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 12/45 (26%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
 Frame = +3

Query: 111 CCGICVFIPIISYFYCNIGKYVKFYC*KYILTS*KL---IQLCTN 236
           CC +C+ +P  + + C +G  +   C  ++L   +L   I  C N
Sbjct: 112 CCAVCLDLPKTAMYQCQMGHLMCAACFTHLLADGRLRDQIATCPN 156


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,634,996
Number of Sequences: 53049
Number of extensions: 232080
Number of successful extensions: 328
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 321
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 328
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1107890535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)