Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc7g14
         (392 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL032630-10|CAA21566.1|  396|Caenorhabditis elegans Hypothetical...    28   2.7  
X69016-1|CAA48781.1|  549|Caenorhabditis elegans ced-4 protein.        27   6.3  
U21324-2|AAX22294.1|  571|Caenorhabditis elegans Cell death abno...    27   6.3  
U21324-1|AAA62564.1|  549|Caenorhabditis elegans Cell death abno...    27   6.3  
AF025462-2|AAN72422.1| 1075|Caenorhabditis elegans Phospholipase...    27   6.3  
AF025462-1|AAN72423.1| 1068|Caenorhabditis elegans Phospholipase...    27   6.3  

>AL032630-10|CAA21566.1|  396|Caenorhabditis elegans Hypothetical
           protein Y62H9A.10 protein.
          Length = 396

 Score = 27.9 bits (59), Expect = 2.7
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = +3

Query: 120 ICVFIPIISYFYCNIGKYVKF 182
           +CVFIPII YF+  I   ++F
Sbjct: 193 LCVFIPIIIYFFIYIRMKLRF 213


>X69016-1|CAA48781.1|  549|Caenorhabditis elegans ced-4 protein.
          Length = 549

 Score = 26.6 bits (56), Expect = 6.3
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = -1

Query: 287 ILTFRLQHVVHFLCSYVIXTQ 225
           +LTF++ H++H    +V+  Q
Sbjct: 451 VLTFKIDHIIHMFLKHVVDAQ 471


>U21324-2|AAX22294.1|  571|Caenorhabditis elegans Cell death
           abnormality protein4, isoform b protein.
          Length = 571

 Score = 26.6 bits (56), Expect = 6.3
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = -1

Query: 287 ILTFRLQHVVHFLCSYVIXTQ 225
           +LTF++ H++H    +V+  Q
Sbjct: 473 VLTFKIDHIIHMFLKHVVDAQ 493


>U21324-1|AAA62564.1|  549|Caenorhabditis elegans Cell death
           abnormality protein4, isoform a protein.
          Length = 549

 Score = 26.6 bits (56), Expect = 6.3
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = -1

Query: 287 ILTFRLQHVVHFLCSYVIXTQ 225
           +LTF++ H++H    +V+  Q
Sbjct: 451 VLTFKIDHIIHMFLKHVVDAQ 471


>AF025462-2|AAN72422.1| 1075|Caenorhabditis elegans Phospholipase c
            like protein 1,isoform a protein.
          Length = 1075

 Score = 26.6 bits (56), Expect = 6.3
 Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 4/64 (6%)
 Frame = +3

Query: 213  KLIQLCTNNVTT*EMDDMLETKCENLMNIVXESRXRFGKTCSEYEL----XSSSMENKIL 380
            KL  L  + VTT    D L +K E+ +  + E      K C+E  L     + + EN   
Sbjct: 954  KLKNLIAHCVTTLSQSDQLLSKIEDSIRRISECHEELSKLCAEAGLKGQKATRAAENFTW 1013

Query: 381  NLKI 392
            NL++
Sbjct: 1014 NLRL 1017


>AF025462-1|AAN72423.1| 1068|Caenorhabditis elegans Phospholipase c
            like protein 1,isoform b protein.
          Length = 1068

 Score = 26.6 bits (56), Expect = 6.3
 Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 4/64 (6%)
 Frame = +3

Query: 213  KLIQLCTNNVTT*EMDDMLETKCENLMNIVXESRXRFGKTCSEYEL----XSSSMENKIL 380
            KL  L  + VTT    D L +K E+ +  + E      K C+E  L     + + EN   
Sbjct: 947  KLKNLIAHCVTTLSQSDQLLSKIEDSIRRISECHEELSKLCAEAGLKGQKATRAAENFTW 1006

Query: 381  NLKI 392
            NL++
Sbjct: 1007 NLRL 1010


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,493,664
Number of Sequences: 27780
Number of extensions: 135394
Number of successful extensions: 245
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 244
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 245
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 598330768
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)