Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc7g13
(712 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly pro... 24 1.6
AF393496-1|AAL60421.1| 146|Apis mellifera odorant binding prote... 23 2.9
AF339140-1|AAK01304.1| 120|Apis mellifera odorant binding prote... 23 2.9
AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase ... 23 3.8
Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein RJP... 22 5.0
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 22 5.0
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 22 6.6
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 21 8.7
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 21 8.7
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 21 8.7
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 21 8.7
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 21 8.7
>DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly
protein 9 protein.
Length = 423
Score = 23.8 bits (49), Expect = 1.6
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = +1
Query: 586 NTRRSENVYFILIINRRNKKNMNVEIFFNNVNY 684
N +N +I I++ + +K N ++ FN VN+
Sbjct: 363 NIYERQNNEYIWIVSNKYQKIANGDLNFNEVNF 395
>AF393496-1|AAL60421.1| 146|Apis mellifera odorant binding protein
ASP6 protein.
Length = 146
Score = 23.0 bits (47), Expect = 2.9
Identities = 7/15 (46%), Positives = 12/15 (80%)
Frame = +2
Query: 548 LRQLVKICKKKSETP 592
++ L K+C KK++TP
Sbjct: 36 IKNLRKVCSKKNDTP 50
>AF339140-1|AAK01304.1| 120|Apis mellifera odorant binding protein
protein.
Length = 120
Score = 23.0 bits (47), Expect = 2.9
Identities = 7/15 (46%), Positives = 12/15 (80%)
Frame = +2
Query: 548 LRQLVKICKKKSETP 592
++ L K+C KK++TP
Sbjct: 10 IKNLRKVCSKKNDTP 24
>AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase
protein.
Length = 510
Score = 22.6 bits (46), Expect = 3.8
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +1
Query: 190 YRRKFKKGQEEE 225
YRR FKK QEE+
Sbjct: 259 YRRNFKKMQEEK 270
>Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein
RJP57-1 protein.
Length = 544
Score = 22.2 bits (45), Expect = 5.0
Identities = 8/24 (33%), Positives = 17/24 (70%)
Frame = +1
Query: 613 FILIINRRNKKNMNVEIFFNNVNY 684
++L ++ R +K +N + FN+VN+
Sbjct: 380 YMLALSNRMQKIINNDFNFNDVNF 403
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 22.2 bits (45), Expect = 5.0
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +1
Query: 37 GLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCE 138
G C Y + PG K+ K+D F F + +CE
Sbjct: 134 GTCLY----VPPGIFKSTCKIDITWFPFDDQRCE 163
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 21.8 bits (44), Expect = 6.6
Identities = 7/17 (41%), Positives = 9/17 (52%)
Frame = -1
Query: 511 WRPFSESK*MVKLFGHW 461
W P + K +KLF W
Sbjct: 433 WNPLMQPKQPIKLFEQW 449
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 8.7
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = -2
Query: 180 PCYFTRIPPHQMGGFTF*IQE 118
P Y+ PP MG F IQE
Sbjct: 351 PVYYGNFPPRPMGPFVS-IQE 370
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 8.7
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = -2
Query: 180 PCYFTRIPPHQMGGFTF*IQE 118
P Y+ PP MG F IQE
Sbjct: 351 PVYYGNFPPRPMGPFVS-IQE 370
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 8.7
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = -2
Query: 180 PCYFTRIPPHQMGGFTF*IQE 118
P Y+ PP MG F IQE
Sbjct: 351 PVYYGNFPPRPMGPFVS-IQE 370
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 8.7
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = -2
Query: 180 PCYFTRIPPHQMGGFTF*IQE 118
P Y+ PP MG F IQE
Sbjct: 351 PVYYGNFPPRPMGPFVS-IQE 370
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.4 bits (43), Expect = 8.7
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = -2
Query: 180 PCYFTRIPPHQMGGFTF*IQE 118
P Y+ PP MG F IQE
Sbjct: 340 PVYYGNFPPRPMGPFVS-IQE 359
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,232
Number of Sequences: 438
Number of extensions: 3613
Number of successful extensions: 16
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21926700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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