Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc7g06
         (651 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    25   2.1  
DQ370048-1|ABD18609.1|  144|Anopheles gambiae putative secreted ...    24   4.8  
AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase ...    24   4.8  
AY553322-1|AAT36323.1|  426|Anopheles gambiae G-protein coupled ...    23   8.4  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    23   8.4  
AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase ...    23   8.4  

>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
           channel alpha1 subunit protein.
          Length = 1893

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 4/42 (9%)
 Frame = -2

Query: 569 LIKIATVLLNAHSPIPALLL----FITVFCVVRVLISGGRFS 456
           L  +   LLN+   I +LLL    FI +F ++ + + GG+F+
Sbjct: 598 LSNLVASLLNSIQSIASLLLLLFLFIVIFALLGMQVFGGKFN 639


>DQ370048-1|ABD18609.1|  144|Anopheles gambiae putative secreted
           polypeptide protein.
          Length = 144

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +1

Query: 460 NLPPDIKTLTTQKTVINKRSAGIGEW 537
           ++P D+ TLTT     N+ S   G W
Sbjct: 29  HIPVDVSTLTTTLHPCNRLSNSYGLW 54


>AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase
           protein.
          Length = 849

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -1

Query: 468 WKIFFYGDYIIIIVPRVRTRLPLTYHNI 385
           W IFF G YII+++          Y++I
Sbjct: 443 WNIFFGGRYIILLMGLFSMYTGFVYNDI 470


>AY553322-1|AAT36323.1|  426|Anopheles gambiae G-protein coupled
           receptor 4 protein.
          Length = 426

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = -2

Query: 551 VLLNAHSPIPALLLFITVFCVVRVLISGGRFSSMETTLLS 432
           V + A     + +  I V+CV+ V+ +GG  S + T   S
Sbjct: 65  VTITAPGHTDSTVAVIIVYCVLFVIAAGGNLSVVITLFRS 104


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 10/31 (32%), Positives = 14/31 (45%)
 Frame = -1

Query: 591 FSLCSATFNQDSNRSSKRPFSDPCTSFVYNS 499
           F  C A F   S  + KRP + P    + +S
Sbjct: 53  FGSCCALFGVQSKLAQKRPVTSPAPPVLSSS 83


>AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase
           protein.
          Length = 808

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = -1

Query: 468 WKIFFYGDYIIIIV 427
           W++FF G YII+++
Sbjct: 433 WQLFFGGRYIILLM 446


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 650,161
Number of Sequences: 2352
Number of extensions: 13257
Number of successful extensions: 236
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 235
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 235
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64395870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)