Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc7g06
         (651 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    22   4.5  
AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          22   4.5  
AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.          22   5.9  
AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.          22   5.9  
AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.          22   5.9  
AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.          22   5.9  
AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          22   5.9  
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    22   5.9  
DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor p...    21   7.8  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    21   7.8  

>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -1

Query: 483 SFDIWWKIFFY 451
           SF+IWW I ++
Sbjct: 2   SFNIWWLILYF 12


>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = +3

Query: 444 SLHRRKSSTRYQNSNNTKNCYKQKKCRDR 530
           S H R   +R+++ N+ +N  ++   RDR
Sbjct: 229 SCHSRYEDSRHEDGNSYRNDGERSCSRDR 257


>AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = +3

Query: 444 SLHRRKSSTRYQNSNNTKNCYKQKKCRDR 530
           S H R   +R+++ N+ +N  ++   RDR
Sbjct: 229 SCHSRYEDSRHEDRNSYRNDGERSCSRDR 257


>AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = +3

Query: 444 SLHRRKSSTRYQNSNNTKNCYKQKKCRDR 530
           S H R   +R+++ N+ +N  ++   RDR
Sbjct: 229 SCHSRYEDSRHEDRNSYRNDGERSCSRDR 257


>AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = +3

Query: 444 SLHRRKSSTRYQNSNNTKNCYKQKKCRDR 530
           S H R   +R+++ N+ +N  ++   RDR
Sbjct: 229 SCHSRYEDSRHEDRNSYRNDGERSCSRDR 257


>AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = +3

Query: 444 SLHRRKSSTRYQNSNNTKNCYKQKKCRDR 530
           S H R   +R+++ N+ +N  ++   RDR
Sbjct: 229 SCHSRYEDSRHEDRNSYRNDGERSCSRDR 257


>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = +3

Query: 444 SLHRRKSSTRYQNSNNTKNCYKQKKCRDR 530
           S H R   +R+++ N+ +N  ++   RDR
Sbjct: 229 SCHSRYEDSRHEDRNSYRNDGERSCSRDR 257


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = +3

Query: 444 SLHRRKSSTRYQNSNNTKNCYKQKKCRDR 530
           S H R   +R+++ N+ +N  ++   RDR
Sbjct: 229 SCHSRYEDSRHEDRNSYRNDGERSCSRDR 257


>DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor
           protein.
          Length = 157

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = -2

Query: 593 SFLCVRLPLIKIATVLLNAHSPIPALLLFITVFCVVRV 480
           S LC+  P I   + LL+   P    LL   + CV +V
Sbjct: 44  SHLCLPAPRINSKSPLLSCACPDGLKLLSDGLMCVEKV 81


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 11/43 (25%), Positives = 17/43 (39%)
 Frame = +1

Query: 409 TGPDPWHYDNNVVSIEENLPPDIKTLTTQKTVINKRSAGIGEW 537
           TG + W   NN+        P     TT K  I+++   +  W
Sbjct: 151 TGDEKWVVYNNIKRKRSWSRPREPAQTTSKAGIHRKKVLLSVW 193


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,661
Number of Sequences: 438
Number of extensions: 3844
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)