Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc7g05
         (572 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    30   0.012
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    30   0.012
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    30   0.012
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    30   0.012
AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    29   0.028
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    29   0.028
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    29   0.028
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    29   0.028
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           23   2.4  
DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    22   3.2  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    21   5.6  
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    21   7.5  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    21   7.5  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      21   7.5  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      21   7.5  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    21   9.9  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.9  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    21   9.9  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 30.3 bits (65), Expect = 0.012
 Identities = 15/47 (31%), Positives = 24/47 (51%)
 Frame = +3

Query: 204 QNAITCVYLCIDRCGQLYGSKTLSDDCFMREIMEKNNYNTYYKMYDR 344
           ++ I CV LC   C  L+  K L DD  M++    ++   +Y  YD+
Sbjct: 792 EHVIGCV-LCSPGCFSLFRGKALMDDNVMKKYTTSSSEARHYVQYDQ 837


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 30.3 bits (65), Expect = 0.012
 Identities = 15/47 (31%), Positives = 24/47 (51%)
 Frame = +3

Query: 204 QNAITCVYLCIDRCGQLYGSKTLSDDCFMREIMEKNNYNTYYKMYDR 344
           ++ I CV LC   C  L+  K L DD  M++    ++   +Y  YD+
Sbjct: 792 EHVIGCV-LCSPGCFSLFRGKALMDDNVMKKYTTSSSEARHYVQYDQ 837


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 30.3 bits (65), Expect = 0.012
 Identities = 15/47 (31%), Positives = 24/47 (51%)
 Frame = +3

Query: 204 QNAITCVYLCIDRCGQLYGSKTLSDDCFMREIMEKNNYNTYYKMYDR 344
           ++ I CV LC   C  L+  K L DD  M++    ++   +Y  YD+
Sbjct: 792 EHVIGCV-LCSPGCFSLFRGKALMDDNVMKKYTTSSSEARHYVQYDQ 837


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 30.3 bits (65), Expect = 0.012
 Identities = 15/47 (31%), Positives = 24/47 (51%)
 Frame = +3

Query: 204 QNAITCVYLCIDRCGQLYGSKTLSDDCFMREIMEKNNYNTYYKMYDR 344
           ++ I CV LC   C  L+  K L DD  M++    ++   +Y  YD+
Sbjct: 792 EHVIGCV-LCSPGCFSLFRGKALMDDNVMKKYTTSSSEARHYVQYDQ 837


>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 29.1 bits (62), Expect = 0.028
 Identities = 14/47 (29%), Positives = 23/47 (48%)
 Frame = +3

Query: 204 QNAITCVYLCIDRCGQLYGSKTLSDDCFMREIMEKNNYNTYYKMYDR 344
           ++ I CV LC   C  L+  K L D   M++   ++    +Y  YD+
Sbjct: 218 EHVIGCV-LCSPGCFSLFRGKALMDKSVMKKYTTRSTQAKHYVQYDQ 263


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 29.1 bits (62), Expect = 0.028
 Identities = 14/47 (29%), Positives = 23/47 (48%)
 Frame = +3

Query: 204 QNAITCVYLCIDRCGQLYGSKTLSDDCFMREIMEKNNYNTYYKMYDR 344
           ++ I CV LC   C  L+  K L D   M++   ++    +Y  YD+
Sbjct: 532 EHVIGCV-LCSPGCFSLFRGKALMDKSVMKKYTTRSTQAKHYVQYDQ 577


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 29.1 bits (62), Expect = 0.028
 Identities = 14/47 (29%), Positives = 23/47 (48%)
 Frame = +3

Query: 204 QNAITCVYLCIDRCGQLYGSKTLSDDCFMREIMEKNNYNTYYKMYDR 344
           ++ I CV LC   C  L+  K L D   M++   ++    +Y  YD+
Sbjct: 765 EHVIGCV-LCSPGCFSLFRGKALMDKSVMKKYTTRSTQAKHYVQYDQ 810


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 29.1 bits (62), Expect = 0.028
 Identities = 14/47 (29%), Positives = 23/47 (48%)
 Frame = +3

Query: 204 QNAITCVYLCIDRCGQLYGSKTLSDDCFMREIMEKNNYNTYYKMYDR 344
           ++ I CV LC   C  L+  K L D   M++   ++    +Y  YD+
Sbjct: 765 EHVIGCV-LCSPGCFSLFRGKALMDKSVMKKYTTRSTQAKHYVQYDQ 810


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +1

Query: 88  TGGFWQ*IQTEPFTAEPLNRTTPTPHS 168
           T  F+Q  +T PF A   ++   T H+
Sbjct: 12  TNSFYQNYKTNPFLASDCDKNQNTEHN 38


>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = -2

Query: 433 YTLNLPSLRPFEICSF 386
           YT+NL SL   EIC F
Sbjct: 285 YTVNLGSLGYNEICEF 300


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 10/32 (31%), Positives = 14/32 (43%)
 Frame = +1

Query: 109 IQTEPFTAEPLNRTTPTPHSSALPLTEIASSF 204
           I  E F A+PLN        +   +TE+   F
Sbjct: 60  INAETFKAQPLNELFDVTRDNYRHITELKRRF 91


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -2

Query: 400 EICSFRGVP 374
           E CSF+GVP
Sbjct: 23  EFCSFQGVP 31


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -2

Query: 400 EICSFRGVP 374
           E CSF+GVP
Sbjct: 25  EFCSFQGVP 33


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -2

Query: 400 EICSFRGVP 374
           E CSF+GVP
Sbjct: 23  EFCSFQGVP 31


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -2

Query: 400 EICSFRGVP 374
           E CSF+GVP
Sbjct: 25  EFCSFQGVP 33


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 81  FINRRFLAVNPNGTV 125
           F+N+ F AV+P G V
Sbjct: 134 FVNQLFSAVDPYGLV 148


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = +2

Query: 50  HHGHVYSRP 76
           HH ++YSRP
Sbjct: 377 HHANLYSRP 385


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -3

Query: 129 RKRFRLDLLPKTAG 88
           RK   LDL+ KTAG
Sbjct: 299 RKGISLDLIRKTAG 312


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,346
Number of Sequences: 336
Number of extensions: 3026
Number of successful extensions: 18
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14203976
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)