Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc7f17
         (618 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.7  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    22   3.6  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    22   3.6  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   8.3  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    21   8.3  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 6/18 (33%), Positives = 11/18 (61%)
 Frame = +2

Query: 560 CLRVERSLYLYCLSVVYD 613
           C  + R  Y YC+S+ ++
Sbjct: 50  CYNLRRIYYFYCVSITFN 67


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = +2

Query: 122 DPHFQWCHLLDLTTDRHC 175
           DP   +C  L++T   HC
Sbjct: 60  DPSADYCLFLEMTLAHHC 77


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = -2

Query: 206 TYHVHGQVNISNDDPLLSQ 150
           ++H H  V+ +N +PLLS+
Sbjct: 56  SFHDHVSVSNTNTEPLLSE 74


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 8/35 (22%), Positives = 13/35 (37%)
 Frame = +2

Query: 35  VVTQDLNLAAEPSAQLSPTQCYSGTAEKHDPHFQW 139
           ++ +D+N A      +     Y    E   PH  W
Sbjct: 1   MIDKDMNSACMRGGSVRTLNNYQQVMEPRSPHTAW 35


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = -1

Query: 390 QPTVFKQSQPTVFKQSQPTVFKQSQTSPS 304
           +P    + QPT   +S+PT   +  T  S
Sbjct: 394 EPVPTPEPQPTQTTESEPTQASEQPTESS 422


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,459
Number of Sequences: 336
Number of extensions: 1812
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15770591
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)