Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc7f14
         (350 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    23   1.2  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     20   6.4  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    20   6.4  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    20   6.4  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    20   6.4  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    20   6.4  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    20   6.4  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    20   6.4  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           20   6.4  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    20   8.5  

>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 22.6 bits (46), Expect = 1.2
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = +2

Query: 176 LSSMQLVHHSSXSQNQKYFVSCQDHQRNQNHKNLS 280
           +  M L+H +  + +Q      Q HQ+N +H+ LS
Sbjct: 300 VEQMNLLHSNDLNMHQ------QHHQQNMSHEELS 328


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 20.2 bits (40), Expect = 6.4
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = +1

Query: 184 HAIGPPFIXITKPEVLRLVSGSPAKSES 267
           H I PP +  T+P    L +  P  S S
Sbjct: 99  HQIRPPILHDTQPMCESLNTQPPVTSSS 126


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 20.2 bits (40), Expect = 6.4
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = +1

Query: 184 HAIGPPFIXITKPEVLRLVSGSPAKSES 267
           H I PP +  T+P    L +  P  S S
Sbjct: 99  HQIRPPILHDTQPMCESLNTQPPVTSSS 126


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 20.2 bits (40), Expect = 6.4
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +2

Query: 74  SSKVFYFSVYNLESILQQQYTQLQ 145
           S  + YF ++    IL  +YTQL+
Sbjct: 142 SQFILYFLLFATLKILLGKYTQLK 165


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 20.2 bits (40), Expect = 6.4
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +2

Query: 278 SIYCHLYCNEYLFL 319
           S+Y  L C E +FL
Sbjct: 70  SVYASLLCTEKIFL 83


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 20.2 bits (40), Expect = 6.4
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = -1

Query: 281  LRGFCDSDFAGDPDTRRSTSGFVIXMNGGPIAWS 180
            L GFC  +FA D   +      +I +  G I ++
Sbjct: 1136 LCGFCVYEFASDERIKLVIKAIIIMILSGCIIFT 1169


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 20.2 bits (40), Expect = 6.4
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +2

Query: 74  SSKVFYFSVYNLESILQQQYTQLQ 145
           S  + YF ++    IL  +YTQL+
Sbjct: 142 SQFILYFLLFATLKILLGKYTQLK 165


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 20.2 bits (40), Expect = 6.4
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +2

Query: 74  SSKVFYFSVYNLESILQQQYTQLQ 145
           S  + YF ++    IL  +YTQL+
Sbjct: 462 SQFILYFLLFATLKILLGKYTQLK 485


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 20.2 bits (40), Expect = 6.4
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = +1

Query: 184 HAIGPPFIXITKPEVLRLVSGSPAKSES 267
           H I PP +  T+P    L +  P  S S
Sbjct: 99  HQIRPPILHDTQPMCESLNTQPPVTSSS 126


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 19.8 bits (39), Expect = 8.5
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +2

Query: 17  LLYAIIIVKITTKCFNVHESSKVFYF 94
           +LY ++  K  T      ES++ FYF
Sbjct: 349 ILYNLMSSKFRTGFIICSESNRKFYF 374


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,467
Number of Sequences: 336
Number of extensions: 1455
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6981810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)