Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc7f14
(350 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0338 - 28084169-28084366,28084414-28085225,28085565-280855... 66 6e-12
01_05_0320 - 20874691-20875230,20879337-20879590,20880014-208810... 66 1e-11
04_01_0630 - 8354628-8355803,8355837-8355926 63 5e-11
04_03_0631 - 18190195-18190686,18190866-18191066 56 8e-09
07_03_0346 - 17010472-17010843 46 1e-05
09_02_0336 - 7397745-7398308,7398813-7400723 45 2e-05
04_01_0468 + 6032467-6033670,6033858-6033964,6034122-6034178 30 0.59
01_06_0227 - 27686525-27686607,27686731-27686803,27687027-276873... 29 1.0
11_01_0425 - 3268975-3269409 26 7.2
09_04_0150 - 15150169-15150228,15150294-15150529,15151844-151520... 26 9.6
05_04_0442 - 21280804-21280897,21281287-21281684 26 9.6
03_02_0700 - 10517754-10519100 26 9.6
>02_05_0338 - 28084169-28084366,28084414-28085225,28085565-28085595,
28085638-28086214,28086439-28087145,28087188-28087228,
28087253-28087366,28087517-28088108
Length = 1023
Score = 66.5 bits (155), Expect = 6e-12
Identities = 27/73 (36%), Positives = 48/73 (65%)
Frame = -1
Query: 344 ILRFIKSSKEKGIHYSKGDNILRGFCDSDFAGDPDTRRSTSGFVIXMNGGPIAWSSRKQS 165
++R++K + E G+HY+ +L G+ DS++ D D ++TSG+V + GG ++W S KQ+
Sbjct: 850 VMRYLKGTVELGLHYTGYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQT 909
Query: 164 VVALSSTEAEYIA 126
++ S+ EAE A
Sbjct: 910 ILTRSTMEAELTA 922
>01_05_0320 - 20874691-20875230,20879337-20879590,20880014-20881087,
20881259-20881511,20881548-20882369
Length = 980
Score = 65.7 bits (153), Expect = 1e-11
Identities = 26/73 (35%), Positives = 46/73 (63%)
Frame = -1
Query: 344 ILRFIKSSKEKGIHYSKGDNILRGFCDSDFAGDPDTRRSTSGFVIXMNGGPIAWSSRKQS 165
++R++K + GIHY+ +L G+ DS++ D D ++TSG+ + GG ++W S KQ+
Sbjct: 806 VMRYLKGTMSYGIHYTGYPKVLEGYSDSNWISDADEIKATSGYAFTLGGGAVSWKSCKQT 865
Query: 164 VVALSSTEAEYIA 126
++ S+ EAE A
Sbjct: 866 ILTRSTMEAELTA 878
>04_01_0630 - 8354628-8355803,8355837-8355926
Length = 421
Score = 63.3 bits (147), Expect = 5e-11
Identities = 28/84 (33%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Frame = -1
Query: 347 NILRFIKSSKEKGIHYSKGD-NILRGFCDSDFAGDPDTRRSTSGFVIXMNGGPIAWSSRK 171
N+ R++ +++ G+ + K + L G+ D+ + DP RS +GFV G I+W S K
Sbjct: 224 NVFRYLNGTRDLGLFFKKNQGSTLIGYTDAGYLSDPHNARSQTGFVFLQGGTAISWKSSK 283
Query: 170 QSVVALSSTEAEYIAAAECFLNCI 99
Q++VA S+ +E IA E C+
Sbjct: 284 QTLVATSTNHSEIIALYEASRECV 307
>04_03_0631 - 18190195-18190686,18190866-18191066
Length = 230
Score = 56.0 bits (129), Expect = 8e-09
Identities = 25/56 (44%), Positives = 37/56 (66%)
Frame = -1
Query: 281 LRGFCDSDFAGDPDTRRSTSGFVIXMNGGPIAWSSRKQSVVALSSTEAEYIAAAEC 114
L G+ DSD+AG R+ST+G + ++WS +KQ+ +ALS+ EAEY+AA C
Sbjct: 73 LLGYSDSDYAGCKVDRKSTTGTCQFLGRSLVSWSFKKQNSIALSTAEAEYVAAGSC 128
>07_03_0346 - 17010472-17010843
Length = 123
Score = 45.6 bits (103), Expect = 1e-05
Identities = 21/44 (47%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Frame = -1
Query: 344 ILRFIKSSKEKGIHYSKGD-NILRGFCDSDFAGDPDTRRSTSGF 216
ILR++K S G+H G L + D+D+AG PD+RRSTSG+
Sbjct: 73 ILRYVKGSLSAGLHIGTGPVKSLTAYSDADWAGCPDSRRSTSGY 116
>09_02_0336 - 7397745-7398308,7398813-7400723
Length = 824
Score = 44.8 bits (101), Expect = 2e-05
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Frame = -1
Query: 344 ILRFIKSSKEKGIHYSKGDNI-LRGFCDSDFAGDPDTRRSTSGFVIXMNGGPIAWSSRK 171
+L +++ +K + Y + +++ + G+ DSDFA D +STSG+V + GG I+W S K
Sbjct: 768 VLHYLQGTKGLMLSYRRSESLQIVGYSDSDFA--KDNTKSTSGYVFTLAGGAISWKSSK 824
>04_01_0468 + 6032467-6033670,6033858-6033964,6034122-6034178
Length = 455
Score = 29.9 bits (64), Expect = 0.59
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = -1
Query: 338 RFIKSSKEKGIHYSKGDNILRGFCDSDFAGDPDTRRS 228
R+++ + + + + D L G+ DSDFA + D RRS
Sbjct: 363 RYLRGTTDACSKFGRTDKGLVGYVDSDFAANLDKRRS 399
>01_06_0227 -
27686525-27686607,27686731-27686803,27687027-27687315,
27687755-27687832,27687869-27687992,27688796-27688940,
27689046-27689166,27689386-27689542,27690704-27690840,
27691863-27692122,27692199-27692387,27692572-27692775,
27693390-27693436,27694435-27694462
Length = 644
Score = 29.1 bits (62), Expect = 1.0
Identities = 20/69 (28%), Positives = 32/69 (46%)
Frame = -1
Query: 332 IKSSKEKGIHYSKGDNILRGFCDSDFAGDPDTRRSTSGFVIXMNGGPIAWSSRKQSVVAL 153
+K ++ + H ++G G D + A D TSG V+ N GP + Q ++L
Sbjct: 350 LKQNRLQRDHVNEGSPSYVGE-DQNNASDCPNNDDTSGGVVATNNGPRNRNGSTQKAMSL 408
Query: 152 SSTEAEYIA 126
S+ EY A
Sbjct: 409 PSSPHEYRA 417
>11_01_0425 - 3268975-3269409
Length = 144
Score = 26.2 bits (55), Expect = 7.2
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -1
Query: 287 NILRGFCDSDFAGDPDTRRSTS 222
+ILRGFCD++ A P + S
Sbjct: 112 DILRGFCDAELAAPPPPSTNAS 133
>09_04_0150 -
15150169-15150228,15150294-15150529,15151844-15152063,
15152218-15152385,15152969-15153214
Length = 309
Score = 25.8 bits (54), Expect = 9.6
Identities = 15/48 (31%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Frame = -1
Query: 245 PDTRRSTSGFVIXMNGGPIAWSSRKQSVVAL-SSTEAEYIAAAECFLN 105
PD R+ G + MNG I + RK ++ L +I A F N
Sbjct: 203 PDVTRAIQGDIRLMNGEAIHATPRKTGIIVLGGGLPKHHICNANMFRN 250
>05_04_0442 - 21280804-21280897,21281287-21281684
Length = 163
Score = 25.8 bits (54), Expect = 9.6
Identities = 17/54 (31%), Positives = 21/54 (38%)
Frame = -1
Query: 281 LRGFCDSDFAGDPDTRRSTSGFVIXMNGGPIAWSSRKQSVVALSSTEAEYIAAA 120
L G C D G RST G A + RK + A+ S + AAA
Sbjct: 10 LSGCCSGDGGGGESESRSTDSVSKNNRCGKKAATGRKAAAAAVESCSRKRAAAA 63
>03_02_0700 - 10517754-10519100
Length = 448
Score = 25.8 bits (54), Expect = 9.6
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +1
Query: 184 HAIGPPFIXITKPEVLRLVSGSPAKSES 267
H PPF+ KP VL + SP E+
Sbjct: 127 HPETPPFVNDVKPRVLLVTGSSPKPCEN 154
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,607,044
Number of Sequences: 37544
Number of extensions: 133749
Number of successful extensions: 333
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 329
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 332
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 518263348
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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