Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc7f14
         (350 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein pr...    74   2e-15
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    24   1.9  
M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.              23   4.4  
AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           23   4.4  
AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR prot...    22   5.8  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    22   5.8  
AY496421-1|AAS80138.1|  439|Anopheles gambiae bacteria responsiv...    22   7.6  

>AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein
           protein.
          Length = 942

 Score = 73.7 bits (173), Expect = 2e-15
 Identities = 36/75 (48%), Positives = 51/75 (68%)
 Frame = -1

Query: 341 LRFIKSSKEKGIHYSKGDNILRGFCDSDFAGDPDTRRSTSGFVIXMNGGPIAWSSRKQSV 162
           LR++ S+ +  +   + D  L  + D+D+AGD   R+S SGF+  + GGPI+WS+RKQ  
Sbjct: 765 LRYLNSTADLKLKLGE-DGQLEAYVDADWAGDHQDRKSNSGFIFHL-GGPISWSARKQQC 822

Query: 161 VALSSTEAEYIAAAE 117
           V LSSTEAEY+A AE
Sbjct: 823 VTLSSTEAEYVALAE 837


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1168

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 14/44 (31%), Positives = 19/44 (43%)
 Frame = -1

Query: 260 DFAGDPDTRRSTSGFVIXMNGGPIAWSSRKQSVVALSSTEAEYI 129
           D A  P TRR ++G       GP  W+     V+A+   E   I
Sbjct: 621 DTADGPVTRRVSAGVTQGSILGPTLWNIMYDGVLAVELPEGASI 664


>M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.
          Length = 613

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 15/50 (30%), Positives = 21/50 (42%)
 Frame = +2

Query: 122 QQQYTQLQCSKVPQLIVFLSSMQLVHHSSXSQNQKYFVSCQDHQRNQNHK 271
           QQQ  Q    + PQ+       QL       Q Q+Y V+    Q+ Q H+
Sbjct: 330 QQQQQQTGRYQPPQM-----RQQLQQQQQQRQPQRYVVAGSSQQQQQQHQ 374


>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -1

Query: 203 NGGPIAWSSRKQSVVALSSTEAEYIAAA 120
           N GP +W S   SV   SS  A  ++A+
Sbjct: 219 NSGPSSWMSGAGSVGGPSSAAAAMLSAS 246


>AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR
           protein.
          Length = 502

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +2

Query: 266 HKNLSIYCHLYCNEYLFLLNF 328
           H N++IY    C +  F+ NF
Sbjct: 402 HTNMNIYLVQNCCQLFFMTNF 422


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 13/40 (32%), Positives = 17/40 (42%)
 Frame = -1

Query: 260 DFAGDPDTRRSTSGFVIXMNGGPIAWSSRKQSVVALSSTE 141
           D A  P TRR T+G       GP  W+     V+ +   E
Sbjct: 618 DTADGPVTRRVTAGVPQGSILGPTLWNIMYDGVLRVELPE 657


>AY496421-1|AAS80138.1|  439|Anopheles gambiae bacteria responsive
           protein 2 protein.
          Length = 439

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -1

Query: 248 DPDTRRSTSGFVIXMNGGPIA 186
           DPDT  + +G+V   N G IA
Sbjct: 391 DPDTAGNKAGYVKAKNLGGIA 411


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 323,206
Number of Sequences: 2352
Number of extensions: 6216
Number of successful extensions: 14
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 25364985
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)