Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc7f14
         (350 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z96047-4|CAB09414.1|  796|Caenorhabditis elegans Hypothetical pr...    29   1.2  
Z82090-3|CAD98728.1| 1516|Caenorhabditis elegans Hypothetical pr...    27   2.9  
Z82090-2|CAB05007.2| 1501|Caenorhabditis elegans Hypothetical pr...    27   2.9  
Z82090-1|CAB05006.1| 1508|Caenorhabditis elegans Hypothetical pr...    27   2.9  
Z68114-4|CAA92159.1|  324|Caenorhabditis elegans Hypothetical pr...    27   2.9  
Z82260-1|CAB05140.1|  332|Caenorhabditis elegans Hypothetical pr...    27   3.8  
Z81114-2|CAB03286.1|  604|Caenorhabditis elegans Hypothetical pr...    27   5.0  
U28737-8|ABA61869.1|  537|Caenorhabditis elegans Hypothetical pr...    27   5.0  
U28737-7|ABA61870.1|  501|Caenorhabditis elegans Hypothetical pr...    27   5.0  
Z72505-4|CAA96611.1|  347|Caenorhabditis elegans Hypothetical pr...    26   6.6  

>Z96047-4|CAB09414.1|  796|Caenorhabditis elegans Hypothetical
           protein DY3.5 protein.
          Length = 796

 Score = 28.7 bits (61), Expect = 1.2
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +2

Query: 38  VKITTKCFNVHESSKVFYFSVYNLESILQQQYTQLQ 145
           +K+T  CF +  +   F  ++Y    I QQQY Q Q
Sbjct: 160 MKLTFCCFPIFNNLNDFSANIYGTAEIQQQQYQQQQ 195


>Z82090-3|CAD98728.1| 1516|Caenorhabditis elegans Hypothetical protein
            ZK337.1c protein.
          Length = 1516

 Score = 27.5 bits (58), Expect = 2.9
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = -1

Query: 341  LRFIKSSKEKGIHYSKGDNILRGFCDSDFAG 249
            ++FI+   ++ + Y + DN    F DSD AG
Sbjct: 1025 IKFIEQGIQRELTYKRADNSFSAFGDSDKAG 1055


>Z82090-2|CAB05007.2| 1501|Caenorhabditis elegans Hypothetical protein
            ZK337.1b protein.
          Length = 1501

 Score = 27.5 bits (58), Expect = 2.9
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = -1

Query: 341  LRFIKSSKEKGIHYSKGDNILRGFCDSDFAG 249
            ++FI+   ++ + Y + DN    F DSD AG
Sbjct: 1028 IKFIEQGIQRELTYKRADNSFSAFGDSDKAG 1058


>Z82090-1|CAB05006.1| 1508|Caenorhabditis elegans Hypothetical protein
            ZK337.1a protein.
          Length = 1508

 Score = 27.5 bits (58), Expect = 2.9
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = -1

Query: 341  LRFIKSSKEKGIHYSKGDNILRGFCDSDFAG 249
            ++FI+   ++ + Y + DN    F DSD AG
Sbjct: 1017 IKFIEQGIQRELTYKRADNSFSAFGDSDKAG 1047


>Z68114-4|CAA92159.1|  324|Caenorhabditis elegans Hypothetical
           protein F17A2.6 protein.
          Length = 324

 Score = 27.5 bits (58), Expect = 2.9
 Identities = 16/55 (29%), Positives = 24/55 (43%)
 Frame = +2

Query: 2   SQRKQLLYAIIIVKITTKCFNVHESSKVFYFSVYNLESILQQQYTQLQCSKVPQL 166
           SQ K  +  +I+      CF    SS ++++ +   E IL QQY        P L
Sbjct: 231 SQNKMFVKGVILQTFLPLCFYCPISS-IYFYCIVTHEEILFQQYFMFLIPAFPAL 284


>Z82260-1|CAB05140.1|  332|Caenorhabditis elegans Hypothetical
           protein C32H11.2 protein.
          Length = 332

 Score = 27.1 bits (57), Expect = 3.8
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +2

Query: 266 HKNLSIYCHLYCNEYLFLLNF 328
           H+N SIYC +  N Y+ LL F
Sbjct: 179 HENCSIYCDILKNSYVGLLIF 199


>Z81114-2|CAB03286.1|  604|Caenorhabditis elegans Hypothetical
           protein T04D3.2 protein.
          Length = 604

 Score = 26.6 bits (56), Expect = 5.0
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +2

Query: 44  ITTKCFNVHESSKVFYFSVYNLESILQQQY 133
           +  K    H+  K + F V+NLES L ++Y
Sbjct: 342 LVAKYSEFHQGLKKYVFHVHNLESNLMEKY 371


>U28737-8|ABA61869.1|  537|Caenorhabditis elegans Hypothetical
           protein F14B8.5a protein.
          Length = 537

 Score = 26.6 bits (56), Expect = 5.0
 Identities = 10/20 (50%), Positives = 16/20 (80%)
 Frame = +2

Query: 212 SQNQKYFVSCQDHQRNQNHK 271
           +QNQ + ++ Q+HQ NQNH+
Sbjct: 473 TQNQNHLIN-QNHQTNQNHQ 491


>U28737-7|ABA61870.1|  501|Caenorhabditis elegans Hypothetical
           protein F14B8.5b protein.
          Length = 501

 Score = 26.6 bits (56), Expect = 5.0
 Identities = 10/20 (50%), Positives = 16/20 (80%)
 Frame = +2

Query: 212 SQNQKYFVSCQDHQRNQNHK 271
           +QNQ + ++ Q+HQ NQNH+
Sbjct: 437 TQNQNHLIN-QNHQTNQNHQ 455


>Z72505-4|CAA96611.1|  347|Caenorhabditis elegans Hypothetical
           protein C50C10.6 protein.
          Length = 347

 Score = 26.2 bits (55), Expect = 6.6
 Identities = 14/55 (25%), Positives = 24/55 (43%)
 Frame = +2

Query: 2   SQRKQLLYAIIIVKITTKCFNVHESSKVFYFSVYNLESILQQQYTQLQCSKVPQL 166
           S +KQL YA+++             S  F F + N+E  L+  +  L  +  P +
Sbjct: 245 SLQKQLFYALVVQSAIPSVLMYFPISMAFIFPMLNIELNLKYPFIGLTIAVYPAI 299


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,076,387
Number of Sequences: 27780
Number of extensions: 129220
Number of successful extensions: 445
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 440
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 445
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 472561672
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)