Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc7f07
(668 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41026-1|AAM51522.2| 101|Caenorhabditis elegans Hypothetical pr... 40 0.002
AL032651-2|CAB60579.1| 272|Caenorhabditis elegans Hypothetical ... 35 0.045
AF016677-4|AAL11109.2| 304|Caenorhabditis elegans Hypothetical ... 33 0.24
Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical pr... 31 0.56
Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical pr... 31 0.56
AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein. 31 0.56
AL021481-4|CAA16335.1| 1083|Caenorhabditis elegans Hypothetical ... 31 0.98
Z81136-1|CAB03458.1| 1256|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z46242-7|CAA86336.1| 1549|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z34801-3|CAA84327.1| 520|Caenorhabditis elegans Hypothetical pr... 30 1.7
U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical pr... 30 1.7
AL023828-24|CAD56604.1| 196|Caenorhabditis elegans Hypothetical... 29 2.3
AF068721-5|AAC19259.1| 1475|Caenorhabditis elegans Holocentric c... 29 2.3
Z48055-11|CAI58650.1| 1013|Caenorhabditis elegans Hypothetical p... 29 3.0
Z29443-14|CAI59118.1| 1013|Caenorhabditis elegans Hypothetical p... 29 3.0
U29380-18|ABB88224.1| 733|Caenorhabditis elegans Zygote defecti... 29 3.0
AY487140-1|AAR32790.1| 733|Caenorhabditis elegans centrosome at... 29 3.0
AF016677-7|AAB66144.1| 292|Caenorhabditis elegans Hypothetical ... 29 3.0
Z99278-7|CAB16488.1| 382|Caenorhabditis elegans Hypothetical pr... 29 3.9
AL132948-9|CAC51067.1| 256|Caenorhabditis elegans Hypothetical ... 28 5.2
AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical ... 28 5.2
AF025467-4|AAN65300.1| 1130|Caenorhabditis elegans Hypothetical ... 28 5.2
AF024499-3|AAB70357.1| 374|Caenorhabditis elegans Hypothetical ... 28 5.2
AC024850-1|AAF60860.2| 404|Caenorhabditis elegans Groundhog (he... 28 5.2
U80442-5|AAB37668.2| 794|Caenorhabditis elegans Hypothetical pr... 28 6.9
Z93383-6|CAB07623.1| 283|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z81107-1|CAB03225.1| 258|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z66524-6|CAA91418.2| 408|Caenorhabditis elegans Hypothetical pr... 27 9.1
U39650-4|AAK39186.1| 944|Caenorhabditis elegans Apical junction... 27 9.1
U39650-3|AAK39188.1| 1148|Caenorhabditis elegans Apical junction... 27 9.1
U39650-2|AAM51517.1| 1439|Caenorhabditis elegans Apical junction... 27 9.1
U39650-1|AAK39187.1| 1480|Caenorhabditis elegans Apical junction... 27 9.1
AC024875-7|AAK29987.2| 97|Caenorhabditis elegans Knl (kinetoch... 27 9.1
>U41026-1|AAM51522.2| 101|Caenorhabditis elegans Hypothetical
protein C28G1.5 protein.
Length = 101
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Frame = -1
Query: 611 CNICFTTLKDTKNVDSSFVT-SIDCNHAVCFKCYVRIIMDNSTYKC-FC 471
C ICF DT DS + ++ C HA+C KC + +++NST +C FC
Sbjct: 6 CKICFDRFSDT---DSEHIPRNLTCGHALCHKC-ITAMVNNSTVECPFC 50
>AL032651-2|CAB60579.1| 272|Caenorhabditis elegans Hypothetical
protein Y6D1A.2 protein.
Length = 272
Score = 35.1 bits (77), Expect = 0.045
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = -1
Query: 611 CNICFTTLKDTKNVDSSFVTSIDCNHAVCFKCYVRIIMDNSTYKC 477
C IC +DTK +DC H +C +C RI +KC
Sbjct: 183 CEICSREYEDTKE---RVPRVLDCGHTICHECITRIHKPTEPFKC 224
>AF016677-4|AAL11109.2| 304|Caenorhabditis elegans Hypothetical
protein ZK1240.3 protein.
Length = 304
Score = 32.7 bits (71), Expect = 0.24
Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 3/82 (3%)
Frame = -1
Query: 611 CNICFTTLKDTKNVDSSFVTSI-DCNHAVCFKCYVRIIMDNSTYKCFCSASSS--DFRVY 441
C IC K+ N+D + I C H++C C ++I ++ Y FC ++ D +V
Sbjct: 6 CEIC---CKEYSNIDQNHSPKILKCGHSICQICAAKLITNSCIYCPFCRETTKIRDGKVE 62
Query: 440 NKHGYVEFMPLTLIRNRDSIKQ 375
N M I + KQ
Sbjct: 63 NLKKNFGLMKAIEIMKNSTTKQ 84
>Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical
protein T10G3.5b protein.
Length = 1203
Score = 31.5 bits (68), Expect = 0.56
Identities = 20/57 (35%), Positives = 38/57 (66%), Gaps = 3/57 (5%)
Frame = -1
Query: 167 LEEFTKKTQELQSTVNDLQEQLRKQVAESQAKFSQFE---RRNSELVAELYTIEMSK 6
LEE K+ E S++NDL+E+L AES+ K ++++ + +++LV L T++++K
Sbjct: 436 LEEKNKEISERDSSINDLKEKL----AESEKKATKYKNELKEHADLVENL-TLQLNK 487
>Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical
protein T10G3.5a protein.
Length = 1205
Score = 31.5 bits (68), Expect = 0.56
Identities = 20/57 (35%), Positives = 38/57 (66%), Gaps = 3/57 (5%)
Frame = -1
Query: 167 LEEFTKKTQELQSTVNDLQEQLRKQVAESQAKFSQFE---RRNSELVAELYTIEMSK 6
LEE K+ E S++NDL+E+L AES+ K ++++ + +++LV L T++++K
Sbjct: 438 LEEKNKEISERDSSINDLKEKL----AESEKKATKYKNELKEHADLVENL-TLQLNK 489
>AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein.
Length = 1205
Score = 31.5 bits (68), Expect = 0.56
Identities = 20/57 (35%), Positives = 38/57 (66%), Gaps = 3/57 (5%)
Frame = -1
Query: 167 LEEFTKKTQELQSTVNDLQEQLRKQVAESQAKFSQFE---RRNSELVAELYTIEMSK 6
LEE K+ E S++NDL+E+L AES+ K ++++ + +++LV L T++++K
Sbjct: 438 LEEKNKEISERDSSINDLKEKL----AESEKKATKYKNELKEHADLVENL-TLQLNK 489
>AL021481-4|CAA16335.1| 1083|Caenorhabditis elegans Hypothetical
protein Y43F4B.6 protein.
Length = 1083
Score = 30.7 bits (66), Expect = 0.98
Identities = 19/56 (33%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Frame = -1
Query: 191 KLKWANRDLEEFTKKTQ-ELQSTVNDLQEQLRKQVAESQAKFSQFERRNSELVAEL 27
KL+ R +EE KKT+ EL++ LR+Q AE+ +KF F++++ +A++
Sbjct: 586 KLQETRRRMEETLKKTEDELKNLKTQRLRLLREQRAEA-SKFQAFKQKHEREMAQM 640
>Z81136-1|CAB03458.1| 1256|Caenorhabditis elegans Hypothetical
protein W02B8.2 protein.
Length = 1256
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/51 (31%), Positives = 31/51 (60%)
Frame = -1
Query: 206 KITELKLKWANRDLEEFTKKTQELQSTVNDLQEQLRKQVAESQAKFSQFER 54
K T ++K N+ L++ ++ ++ QS V + +LRK +AE+ K +F+R
Sbjct: 541 KKTIQEVKADNKKLQQILEEVRQNQSKVLEENVKLRKGMAEAIEKIEEFKR 591
>Z46242-7|CAA86336.1| 1549|Caenorhabditis elegans Hypothetical protein
F35G12.8 protein.
Length = 1549
Score = 29.9 bits (64), Expect = 1.7
Identities = 19/68 (27%), Positives = 35/68 (51%)
Frame = -1
Query: 236 CDYAMLKHEHKITELKLKWANRDLEEFTKKTQELQSTVNDLQEQLRKQVAESQAKFSQFE 57
CD + +H+ I ++K K +L E +E++S + E+ KQ+ + Q K +
Sbjct: 950 CDENISRHDKDIEKMKKKC--EELMEKAIDDEEVKSK-KETVERFEKQIKKLQTKGEEMT 1006
Query: 56 RRNSELVA 33
++ SEL A
Sbjct: 1007 KKQSELSA 1014
>Z34801-3|CAA84327.1| 520|Caenorhabditis elegans Hypothetical
protein F59A2.2 protein.
Length = 520
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/50 (26%), Positives = 30/50 (60%)
Frame = -1
Query: 206 KITELKLKWANRDLEEFTKKTQELQSTVNDLQEQLRKQVAESQAKFSQFE 57
K++E K + LEE +K E+++ +ND E+L+++ + + + S ++
Sbjct: 368 KLSEAKAQGVKAVLEEEERKRTEMETDLNDEIERLKEETEKMRLEMSTYK 417
>U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical protein
F58G4.1 protein.
Length = 1974
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/45 (28%), Positives = 26/45 (57%)
Frame = -1
Query: 164 EEFTKKTQELQSTVNDLQEQLRKQVAESQAKFSQFERRNSELVAE 30
++ + + L+ TV+DL+ ++KQ +E QAK Q E+ ++
Sbjct: 951 KKIEQDNEGLKKTVSDLETTIKKQESEKQAKDHQIRSLQDEIQSQ 995
Score = 27.5 bits (58), Expect = 9.1
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = -1
Query: 170 DLEEFTKKTQELQSTVNDLQEQLRKQVAESQAKFSQFERRNSELVAEL 27
+ E+F + +E Q D+Q QL K +E Q ++FE EL
Sbjct: 1349 ECEQFRESLEEEQDAKTDVQRQLSKANSEIQQWRAKFEGEGVSRAEEL 1396
>AL023828-24|CAD56604.1| 196|Caenorhabditis elegans Hypothetical
protein Y17G7B.21 protein.
Length = 196
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/58 (24%), Positives = 32/58 (55%)
Frame = -1
Query: 206 KITELKLKWANRDLEEFTKKTQELQSTVNDLQEQLRKQVAESQAKFSQFERRNSELVA 33
K+ + K+A R + +L+ + ++ ++++AES+A+ +F+R EL+A
Sbjct: 72 KLFNVGKKYAKRFATSTSSAASKLRLVKLKIDKKYQQRLAESKARVERFQREREELLA 129
>AF068721-5|AAC19259.1| 1475|Caenorhabditis elegans Holocentric
chromosome bindingprotein protein 1 protein.
Length = 1475
Score = 29.5 bits (63), Expect = 2.3
Identities = 21/84 (25%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Frame = -1
Query: 278 AKNSQVEHKMTMLNCDYAMLKHEHKITELKLKWANRDLEEFTKKTQELQSTV---NDLQE 108
+++ + EH++ M K E ++ LK + AN +++EF K ++L+ V ++ +E
Sbjct: 397 SESLKYEHELVRKMMIEDMEKLEAEVLALKSQQANLEIQEFHDKIKQLELEVQLSSENKE 456
Query: 107 QLRKQVAESQAKFSQFERRNSELV 36
+L+ ++ Q K S+ + E V
Sbjct: 457 KLQAELMVVQEKASENIKNAEEKV 480
>Z48055-11|CAI58650.1| 1013|Caenorhabditis elegans Hypothetical
protein T07C4.10 protein.
Length = 1013
Score = 29.1 bits (62), Expect = 3.0
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = -1
Query: 197 ELKLKWANRDLEEFTKKTQELQSTVNDLQEQLRKQVAESQAKFSQFERRNSEL 39
E KLK + L ++ K +ELQS +N +++L + AE++ + EL
Sbjct: 278 EKKLKTSQEKLVKYEGKIEELQSRLNKKRKELEEVQAENRKLLEDKNTHDFEL 330
>Z29443-14|CAI59118.1| 1013|Caenorhabditis elegans Hypothetical
protein T07C4.10 protein.
Length = 1013
Score = 29.1 bits (62), Expect = 3.0
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = -1
Query: 197 ELKLKWANRDLEEFTKKTQELQSTVNDLQEQLRKQVAESQAKFSQFERRNSEL 39
E KLK + L ++ K +ELQS +N +++L + AE++ + EL
Sbjct: 278 EKKLKTSQEKLVKYEGKIEELQSRLNKKRKELEEVQAENRKLLEDKNTHDFEL 330
>U29380-18|ABB88224.1| 733|Caenorhabditis elegans Zygote defective:
embryonic lethalprotein 12, isoform d protein.
Length = 733
Score = 29.1 bits (62), Expect = 3.0
Identities = 37/133 (27%), Positives = 58/133 (43%), Gaps = 18/133 (13%)
Frame = -1
Query: 440 NKHGYVEFMPLTLIRNRDSIKQ---HWRELLEN-NTVNNRIIDLNDVXXXXXXXXXXRAK 273
+K VE + + LI++++ +K+ EL+E N + N++I V A
Sbjct: 434 SKKRCVEQLEIQLIQHKEKVKELEDRKDELIEERNRLENQLIFKEAVTPRSLHESMFEAG 493
Query: 272 NSQVEHKMTM-LNCDYAMLKHEHKITE---------LKLKWANRDLEE----FTKKTQEL 135
N + K T+ L + L + E + LK N LEE TK+ +EL
Sbjct: 494 NLSFDEKNTLPLEIENKRLTERIQELESLEPLKGELITLKSKNGVLEEEKLFATKQIEEL 553
Query: 134 QSTVNDLQEQLRK 96
Q + DLQE L K
Sbjct: 554 QQQIEDLQENLLK 566
>AY487140-1|AAR32790.1| 733|Caenorhabditis elegans centrosome
attachment protein A protein.
Length = 733
Score = 29.1 bits (62), Expect = 3.0
Identities = 37/133 (27%), Positives = 58/133 (43%), Gaps = 18/133 (13%)
Frame = -1
Query: 440 NKHGYVEFMPLTLIRNRDSIKQ---HWRELLEN-NTVNNRIIDLNDVXXXXXXXXXXRAK 273
+K VE + + LI++++ +K+ EL+E N + N++I V A
Sbjct: 434 SKKRCVEQLEIQLIQHKEKVKELEDRKDELIEERNRLENQLIFKEAVTPRSLHESMFEAG 493
Query: 272 NSQVEHKMTM-LNCDYAMLKHEHKITE---------LKLKWANRDLEE----FTKKTQEL 135
N + K T+ L + L + E + LK N LEE TK+ +EL
Sbjct: 494 NLSFDEKNTLPLEIENKRLTERIQELESLEPLKGELITLKSKNGVLEEEKLFATKQIEEL 553
Query: 134 QSTVNDLQEQLRK 96
Q + DLQE L K
Sbjct: 554 QQQIEDLQENLLK 566
>AF016677-7|AAB66144.1| 292|Caenorhabditis elegans Hypothetical
protein ZK1240.8 protein.
Length = 292
Score = 29.1 bits (62), Expect = 3.0
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = -1
Query: 611 CNICFTTLKDTKNVDSSFVTSI-DCNHAVCFKCYVRIIMDNSTYKC 477
C +C +D N+D S + C H++C C V++I NS C
Sbjct: 6 CEVCN---EDYSNLDESRAPRVLKCGHSICQNCAVKLI-SNSVILC 47
>Z99278-7|CAB16488.1| 382|Caenorhabditis elegans Hypothetical
protein Y53C12B.6 protein.
Length = 382
Score = 28.7 bits (61), Expect = 3.9
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Frame = -1
Query: 539 NHAVCFKCYVRIIMDNSTYKC---FCSASSSDFRVYNKHGYVEFMPLTLIRNR 390
NH V FKC +RI + N + +C CS + S + K V P L++ +
Sbjct: 258 NHIVYFKCNIRITVKNPSGECPVNNCSPNGSTGLISRKARDVFEHPFLLLKQK 310
>AL132948-9|CAC51067.1| 256|Caenorhabditis elegans Hypothetical
protein Y39B6A.10 protein.
Length = 256
Score = 28.3 bits (60), Expect = 5.2
Identities = 22/89 (24%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Frame = -1
Query: 590 LKDTKNVDSSFVTSIDCNHAVCFKCYVRIIM-DNSTYKCFCSASSSDFRVYNKHGYVEFM 414
LK T+N++ S + + A+C K V + + D + ++ F S R+ K
Sbjct: 115 LKITENLEKSIIDYL----ALCQKLPVLVTLRDVTEFQIFAQKSEVPLRIQYKK-----R 165
Query: 413 PLTLIRNRDSIKQHWRELLENNTVNNRII 327
L ++R +++KQ + ++L N+T +I
Sbjct: 166 KLKILRISENLKQFFTKMLGNSTSGTHLI 194
>AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical
protein R148.3a protein.
Length = 1115
Score = 28.3 bits (60), Expect = 5.2
Identities = 17/64 (26%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Frame = -1
Query: 197 ELKLKWANRDLEEFTKKTQELQSTVNDLQEQLR---KQVAESQAKFSQFERRNSELVAEL 27
E KLK A DL+E ++ +E+ + +L ++L K + +S K ++ ++ ++L E
Sbjct: 821 EHKLKNAESDLQEAKRRAEEIGAEKKELSDRLNEMLKNLNQSMQKSAENDKMLTQLREEA 880
Query: 26 YTIE 15
+ E
Sbjct: 881 FAKE 884
Score = 27.9 bits (59), Expect = 6.9
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = -1
Query: 170 DLEEFTKKTQELQSTVNDLQEQLRKQ--VAESQAKFSQFERRNSELVAELYTIE 15
+LEE K ELQ V L+E+L K+ VA S + ++E+V + IE
Sbjct: 709 ELEELRNKNLELQEQVKQLKEELEKEKSVAGSGNSGGWSDIDDNEVVEAVQPIE 762
>AF025467-4|AAN65300.1| 1130|Caenorhabditis elegans Hypothetical
protein R148.3b protein.
Length = 1130
Score = 28.3 bits (60), Expect = 5.2
Identities = 17/64 (26%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Frame = -1
Query: 197 ELKLKWANRDLEEFTKKTQELQSTVNDLQEQLR---KQVAESQAKFSQFERRNSELVAEL 27
E KLK A DL+E ++ +E+ + +L ++L K + +S K ++ ++ ++L E
Sbjct: 833 EHKLKNAESDLQEAKRRAEEIGAEKKELSDRLNEMLKNLNQSMQKSAENDKMLTQLREEA 892
Query: 26 YTIE 15
+ E
Sbjct: 893 FAKE 896
Score = 27.9 bits (59), Expect = 6.9
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = -1
Query: 170 DLEEFTKKTQELQSTVNDLQEQLRKQ--VAESQAKFSQFERRNSELVAELYTIE 15
+LEE K ELQ V L+E+L K+ VA S + ++E+V + IE
Sbjct: 721 ELEELRNKNLELQEQVKQLKEELEKEKSVAGSGNSGGWSDIDDNEVVEAVQPIE 774
>AF024499-3|AAB70357.1| 374|Caenorhabditis elegans Hypothetical
protein F42G2.5 protein.
Length = 374
Score = 28.3 bits (60), Expect = 5.2
Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = -1
Query: 611 CNICFTTLKDTKNVDSSFVTSIDCNHAVCFKCYVRIIMDNSTYKC-FC 471
C IC TL+ + VD+ + C H++C C + + N C FC
Sbjct: 134 CEIC--TLEFSSVVDNQIPRILQCGHSICQSCASK-LAKNCVILCPFC 178
>AC024850-1|AAF60860.2| 404|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 16 protein.
Length = 404
Score = 28.3 bits (60), Expect = 5.2
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -1
Query: 125 VNDLQEQLRKQVAESQAKFSQFERRNSELVAE 30
VN+ + QL KQ+ E Q KF + E+ + V E
Sbjct: 130 VNEYELQLAKQIEEDQLKFVEDEKNPMKYVVE 161
>U80442-5|AAB37668.2| 794|Caenorhabditis elegans Hypothetical
protein T20F5.6 protein.
Length = 794
Score = 27.9 bits (59), Expect = 6.9
Identities = 10/38 (26%), Positives = 17/38 (44%)
Frame = -1
Query: 614 SCNICFTTLKDTKNVDSSFVTSIDCNHAVCFKCYVRII 501
SC IC+ K + F C H +C +C +++
Sbjct: 115 SCGICYDPFNTGKRIPKVF----PCGHTICLQCIKKLL 148
>Z93383-6|CAB07623.1| 283|Caenorhabditis elegans Hypothetical
protein F54B8.6 protein.
Length = 283
Score = 27.5 bits (58), Expect = 9.1
Identities = 9/36 (25%), Positives = 18/36 (50%)
Frame = +1
Query: 109 SCRSFTVDCNSCVFLVNSSKSRFAHFNFNSVILCSC 216
+C F NSC + ++ + HF+ ++ +C C
Sbjct: 156 NCDVFKCTVNSCYYNYYLTQEQIVHFSIGTMTICFC 191
>Z81107-1|CAB03225.1| 258|Caenorhabditis elegans Hypothetical
protein R07H5.1 protein.
Length = 258
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/46 (28%), Positives = 25/46 (54%)
Frame = -1
Query: 155 TKKTQELQSTVNDLQEQLRKQVAESQAKFSQFERRNSELVAELYTI 18
T++ ++LQS V+DLQ ++ + Q + SE+ LY++
Sbjct: 124 TEEIRQLQSQVDDLQNSIKFIMDSVSQTTQQLATQQSEISRALYSV 169
>Z66524-6|CAA91418.2| 408|Caenorhabditis elegans Hypothetical
protein T13H5.2 protein.
Length = 408
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -1
Query: 419 FMPLTLIRNRDSIKQHWRELLENNTVNNRII 327
F+P+TL N K +W LENN +N I+
Sbjct: 310 FVPITLEGNVPGRKLYWWWRLENNDINFSIL 340
>U39650-4|AAK39186.1| 944|Caenorhabditis elegans Apical junction
molecule protein1, isoform b protein.
Length = 944
Score = 27.5 bits (58), Expect = 9.1
Identities = 15/56 (26%), Positives = 32/56 (57%)
Frame = -1
Query: 191 KLKWANRDLEEFTKKTQELQSTVNDLQEQLRKQVAESQAKFSQFERRNSELVAELY 24
+++ R+LE ++ ELQ + +E+ R + + + + ERR +ELVA+++
Sbjct: 464 RIERERRELEARERQELELQRREAEDRERQRLEDEAREMRRREEERREAELVADVH 519
>U39650-3|AAK39188.1| 1148|Caenorhabditis elegans Apical junction
molecule protein1, isoform c protein.
Length = 1148
Score = 27.5 bits (58), Expect = 9.1
Identities = 15/56 (26%), Positives = 32/56 (57%)
Frame = -1
Query: 191 KLKWANRDLEEFTKKTQELQSTVNDLQEQLRKQVAESQAKFSQFERRNSELVAELY 24
+++ R+LE ++ ELQ + +E+ R + + + + ERR +ELVA+++
Sbjct: 464 RIERERRELEARERQELELQRREAEDRERQRLEDEAREMRRREEERREAELVADVH 519
>U39650-2|AAM51517.1| 1439|Caenorhabditis elegans Apical junction
molecule protein1, isoform d protein.
Length = 1439
Score = 27.5 bits (58), Expect = 9.1
Identities = 15/56 (26%), Positives = 32/56 (57%)
Frame = -1
Query: 191 KLKWANRDLEEFTKKTQELQSTVNDLQEQLRKQVAESQAKFSQFERRNSELVAELY 24
+++ R+LE ++ ELQ + +E+ R + + + + ERR +ELVA+++
Sbjct: 464 RIERERRELEARERQELELQRREAEDRERQRLEDEAREMRRREEERREAELVADVH 519
>U39650-1|AAK39187.1| 1480|Caenorhabditis elegans Apical junction
molecule protein1, isoform a protein.
Length = 1480
Score = 27.5 bits (58), Expect = 9.1
Identities = 15/56 (26%), Positives = 32/56 (57%)
Frame = -1
Query: 191 KLKWANRDLEEFTKKTQELQSTVNDLQEQLRKQVAESQAKFSQFERRNSELVAELY 24
+++ R+LE ++ ELQ + +E+ R + + + + ERR +ELVA+++
Sbjct: 464 RIERERRELEARERQELELQRREAEDRERQRLEDEAREMRRREEERREAELVADVH 519
>AC024875-7|AAK29987.2| 97|Caenorhabditis elegans Knl (kinetochore
null) bindingprotein protein 4 protein.
Length = 97
Score = 27.5 bits (58), Expect = 9.1
Identities = 18/62 (29%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Frame = -1
Query: 206 KITELKLKWANRDLEEFTKKTQELQSTVNDLQEQLR-KQVAESQAKFSQFERRNSELVAE 30
+I ++ A+R LEE +K + ++ + DLQEQ + K+ A S K +F+ ++ E
Sbjct: 38 QIINKEMDEADRKLEETLEKRKLVEKQLEDLQEQYKVKEFAFSLQK--EFQDELKKVAEE 95
Query: 29 LY 24
++
Sbjct: 96 IF 97
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,013,644
Number of Sequences: 27780
Number of extensions: 256937
Number of successful extensions: 1064
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 980
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1064
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1508017654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -