Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc7f06
         (211 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    22   0.77 
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   1.8  
DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    20   2.4  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    20   3.1  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    19   7.2  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       18   9.5  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    18   9.5  

>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory
          receptor candidate 60 protein.
          Length = 364

 Score = 21.8 bits (44), Expect = 0.77
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = +1

Query: 22 VESPRVVVNKFNLI 63
          V+ PR+VV+ FN++
Sbjct: 36 VQYPRIVVSTFNIV 49


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 20.6 bits (41), Expect = 1.8
 Identities = 8/18 (44%), Positives = 11/18 (61%), Gaps = 1/18 (5%)
 Frame = +3

Query: 129 TCSXMSSLSDLWPR-TSP 179
           TCS +   + LWP+ T P
Sbjct: 81  TCSMLCGSTQLWPQPTGP 98


>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 20.2 bits (40), Expect = 2.4
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +1

Query: 148 ACQICGQGHRQQ 183
           +C ICG+  R+Q
Sbjct: 109 SCDICGKAFRRQ 120


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 19.8 bits (39), Expect = 3.1
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = +2

Query: 65  IKMAQVKIGEFKFGEDTFTLXYVL 136
           IKMA   I  F  G DT ++   L
Sbjct: 286 IKMAAQAIAFFSAGNDTTSITLAL 309


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 18.6 bits (36), Expect = 7.2
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +1

Query: 31  PRVVVNKFNL 60
           PR+VVN  NL
Sbjct: 178 PRLVVNTINL 187


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 18.2 bits (35), Expect = 9.5
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -2

Query: 168 LATNLTGCSSPS 133
           + T LT C+SP+
Sbjct: 126 METTLTPCASPN 137


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 18.2 bits (35), Expect = 9.5
 Identities = 5/14 (35%), Positives = 9/14 (64%)
 Frame = +3

Query: 129 TCSXMSSLSDLWPR 170
           TC+ + S   +WP+
Sbjct: 67  TCNMLCSEPAIWPK 80


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,108
Number of Sequences: 336
Number of extensions: 369
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 45
effective length of database: 107,465
effective search space used:  2579160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)