Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc7f04
         (293 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          23   1.0  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      23   1.0  
AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding prote...    23   1.0  
AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding pro...    23   1.0  
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          23   1.0  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    22   1.8  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          21   4.2  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      21   4.2  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    20   5.5  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              19   9.6  

>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 22.6 bits (46), Expect = 1.0
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -3

Query: 204 HMPLHYQCDINADKNV 157
           H P  Y   +N+DKNV
Sbjct: 495 HKPFTYHIVVNSDKNV 510


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 22.6 bits (46), Expect = 1.0
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -3

Query: 204 HMPLHYQCDINADKNV 157
           H P  Y   +N+DKNV
Sbjct: 495 HKPFTYHIVVNSDKNV 510


>AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding protein
           ASP1 protein.
          Length = 144

 Score = 22.6 bits (46), Expect = 1.0
 Identities = 7/25 (28%), Positives = 16/25 (64%)
 Frame = -3

Query: 90  QVDETNKQEVVDKTDATTYNSCIIK 16
           Q+D+ +K  +V++   T Y  C+++
Sbjct: 55  QIDDVDKGNLVNEPSITCYMYCLLE 79


>AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding
           protein ASP1 protein.
          Length = 144

 Score = 22.6 bits (46), Expect = 1.0
 Identities = 7/25 (28%), Positives = 16/25 (64%)
 Frame = -3

Query: 90  QVDETNKQEVVDKTDATTYNSCIIK 16
           Q+D+ +K  +V++   T Y  C+++
Sbjct: 55  QIDDVDKGNLVNEPSITCYMYCLLE 79


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 22.6 bits (46), Expect = 1.0
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -3

Query: 204 HMPLHYQCDINADKNV 157
           H P  Y   +N+DKNV
Sbjct: 121 HKPFTYHIVVNSDKNV 136


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 21.8 bits (44), Expect = 1.8
 Identities = 7/25 (28%), Positives = 14/25 (56%)
 Frame = +1

Query: 163 FICVNVTLIM*RHMVFYIYFNTITT 237
           F C+ V  ++ R + +Y++   I T
Sbjct: 231 FTCLEVVFVLKRRLGYYLFHTYIPT 255


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 20.6 bits (41), Expect = 4.2
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -3

Query: 204 HMPLHYQCDINADK 163
           H P ++   INADK
Sbjct: 497 HKPFNFHITINADK 510


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 20.6 bits (41), Expect = 4.2
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -3

Query: 204 HMPLHYQCDINADK 163
           H P ++   INADK
Sbjct: 497 HKPFNFHITINADK 510


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 20.2 bits (40), Expect = 5.5
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = -3

Query: 105 NHNHEQVDETNKQE 64
           NHNH Q   ++K +
Sbjct: 426 NHNHNQARHSSKSD 439


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 19.4 bits (38), Expect = 9.6
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +1

Query: 1   EYHLNFYDARIVCCCVSFIDDFLFV 75
           EY +    A + C   SF+ DF+ V
Sbjct: 112 EYAIRGNSAILKCVVPSFVADFVKV 136


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,648
Number of Sequences: 438
Number of extensions: 1386
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  5994288
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)