Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc7e20
(309 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L04483-1|AAA99893.1| 83|Homo sapiens ribosomal protein S21 pro... 124 5e-29
CR542132-1|CAG46929.1| 83|Homo sapiens RPS21 protein. 124 5e-29
BC021990-1|AAH21990.1| 83|Homo sapiens ribosomal protein S21 p... 124 5e-29
AL121832-3|CAC21458.1| 83|Homo sapiens ribosomal protein S21 p... 124 5e-29
AJ250907-1|CAB83213.1| 83|Homo sapiens ribosomal protein S21 p... 124 5e-29
AB061843-1|BAB79481.1| 83|Homo sapiens ribosomal protein S21 p... 124 5e-29
BC018140-1|AAH18140.1| 81|Homo sapiens RPS21 protein protein. 120 7e-28
AL121832-2|CAC29248.1| 90|Homo sapiens ribosomal protein S21 p... 95 5e-20
BC027976-1|AAH27976.1| 66|Homo sapiens RPS21 protein protein. 73 2e-13
AL121832-1|CAC29247.1| 66|Homo sapiens ribosomal protein S21 p... 73 2e-13
AB007157-1|BAA25821.1| 54|Homo sapiens ribosomal protein S21 p... 72 3e-13
X79563-1|CAA56100.2| 97|Homo sapiens 8.2 kDa differentiation f... 69 3e-12
>L04483-1|AAA99893.1| 83|Homo sapiens ribosomal protein S21
protein.
Length = 83
Score = 124 bits (299), Expect = 5e-29
Identities = 57/83 (68%), Positives = 66/83 (79%)
Frame = +3
Query: 18 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVXPATGRAADTSKMYVVCGAIR 197
MQNDAGEFVDLY PRKCSASNR+I AKDHAS+Q+ +A+V TGR K Y +CGAIR
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAIR 60
Query: 198 RMGESDDCIVRLTKKDGILXKNY 266
RMGESDD I+RL K DGI+ KN+
Sbjct: 61 RMGESDDSILRLAKADGIVSKNF 83
>CR542132-1|CAG46929.1| 83|Homo sapiens RPS21 protein.
Length = 83
Score = 124 bits (299), Expect = 5e-29
Identities = 57/83 (68%), Positives = 66/83 (79%)
Frame = +3
Query: 18 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVXPATGRAADTSKMYVVCGAIR 197
MQNDAGEFVDLY PRKCSASNR+I AKDHAS+Q+ +A+V TGR K Y +CGAIR
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAIR 60
Query: 198 RMGESDDCIVRLTKKDGILXKNY 266
RMGESDD I+RL K DGI+ KN+
Sbjct: 61 RMGESDDSILRLAKADGIVSKNF 83
>BC021990-1|AAH21990.1| 83|Homo sapiens ribosomal protein S21
protein.
Length = 83
Score = 124 bits (299), Expect = 5e-29
Identities = 57/83 (68%), Positives = 66/83 (79%)
Frame = +3
Query: 18 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVXPATGRAADTSKMYVVCGAIR 197
MQNDAGEFVDLY PRKCSASNR+I AKDHAS+Q+ +A+V TGR K Y +CGAIR
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAIR 60
Query: 198 RMGESDDCIVRLTKKDGILXKNY 266
RMGESDD I+RL K DGI+ KN+
Sbjct: 61 RMGESDDSILRLAKADGIVSKNF 83
>AL121832-3|CAC21458.1| 83|Homo sapiens ribosomal protein S21
protein.
Length = 83
Score = 124 bits (299), Expect = 5e-29
Identities = 57/83 (68%), Positives = 66/83 (79%)
Frame = +3
Query: 18 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVXPATGRAADTSKMYVVCGAIR 197
MQNDAGEFVDLY PRKCSASNR+I AKDHAS+Q+ +A+V TGR K Y +CGAIR
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAIR 60
Query: 198 RMGESDDCIVRLTKKDGILXKNY 266
RMGESDD I+RL K DGI+ KN+
Sbjct: 61 RMGESDDSILRLAKADGIVSKNF 83
>AJ250907-1|CAB83213.1| 83|Homo sapiens ribosomal protein S21
protein.
Length = 83
Score = 124 bits (299), Expect = 5e-29
Identities = 57/83 (68%), Positives = 66/83 (79%)
Frame = +3
Query: 18 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVXPATGRAADTSKMYVVCGAIR 197
MQNDAGEFVDLY PRKCSASNR+I AKDHAS+Q+ +A+V TGR K Y +CGAIR
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAIR 60
Query: 198 RMGESDDCIVRLTKKDGILXKNY 266
RMGESDD I+RL K DGI+ KN+
Sbjct: 61 RMGESDDSILRLAKADGIVSKNF 83
>AB061843-1|BAB79481.1| 83|Homo sapiens ribosomal protein S21
protein.
Length = 83
Score = 124 bits (299), Expect = 5e-29
Identities = 57/83 (68%), Positives = 66/83 (79%)
Frame = +3
Query: 18 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVXPATGRAADTSKMYVVCGAIR 197
MQNDAGEFVDLY PRKCSASNR+I AKDHAS+Q+ +A+V TGR K Y +CGAIR
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAIR 60
Query: 198 RMGESDDCIVRLTKKDGILXKNY 266
RMGESDD I+RL K DGI+ KN+
Sbjct: 61 RMGESDDSILRLAKADGIVSKNF 83
>BC018140-1|AAH18140.1| 81|Homo sapiens RPS21 protein protein.
Length = 81
Score = 120 bits (290), Expect = 7e-28
Identities = 56/81 (69%), Positives = 64/81 (79%)
Frame = +3
Query: 18 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVXPATGRAADTSKMYVVCGAIR 197
MQNDAGEFVDLY PRKCSASNR+I AKDHAS+Q+ +A+V TGR K Y +CGAIR
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAIR 60
Query: 198 RMGESDDCIVRLTKKDGILXK 260
RMGESDD I+RL K DGI+ K
Sbjct: 61 RMGESDDSILRLAKADGIVSK 81
>AL121832-2|CAC29248.1| 90|Homo sapiens ribosomal protein S21
protein.
Length = 90
Score = 94.7 bits (225), Expect = 5e-20
Identities = 43/62 (69%), Positives = 49/62 (79%)
Frame = +3
Query: 18 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVXPATGRAADTSKMYVVCGAIR 197
MQNDAGEFVDLY PRKCSASNR+I AKDHAS+Q+ +A+V TGR K Y +CGAIR
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAIR 60
Query: 198 RM 203
RM
Sbjct: 61 RM 62
>BC027976-1|AAH27976.1| 66|Homo sapiens RPS21 protein protein.
Length = 66
Score = 72.9 bits (171), Expect = 2e-13
Identities = 33/45 (73%), Positives = 38/45 (84%)
Frame = +3
Query: 18 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVXPATGR 152
MQNDAGEFVDLY PRKCSASNR+I AKDHAS+Q+ +A+V GR
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVSWEPGR 45
>AL121832-1|CAC29247.1| 66|Homo sapiens ribosomal protein S21
protein.
Length = 66
Score = 72.9 bits (171), Expect = 2e-13
Identities = 33/45 (73%), Positives = 38/45 (84%)
Frame = +3
Query: 18 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVXPATGR 152
MQNDAGEFVDLY PRKCSASNR+I AKDHAS+Q+ +A+V GR
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVSWEPGR 45
>AB007157-1|BAA25821.1| 54|Homo sapiens ribosomal protein S21
protein.
Length = 54
Score = 72.1 bits (169), Expect = 3e-13
Identities = 33/54 (61%), Positives = 40/54 (74%)
Frame = +3
Query: 78 NRLIHAKDHASVQLVIADVXPATGRAADTSKMYVVCGAIRRMGESDDCIVRLTK 239
NR+I AKDHAS+Q+ +A+V TGR K Y +CGAIRRMGESDD I+RL K
Sbjct: 1 NRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAIRRMGESDDSILRLAK 54
>X79563-1|CAA56100.2| 97|Homo sapiens 8.2 kDa differentiation
factor protein.
Length = 97
Score = 68.9 bits (161), Expect = 3e-12
Identities = 30/37 (81%), Positives = 34/37 (91%)
Frame = +3
Query: 18 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIA 128
MQNDAGEFVDLY PRKCSASNR+I AKDHAS+Q+ +A
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVA 37
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 42,125,780
Number of Sequences: 237096
Number of extensions: 747173
Number of successful extensions: 1399
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1360
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1399
length of database: 76,859,062
effective HSP length: 78
effective length of database: 58,365,574
effective search space used: 1400773776
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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