Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc7e15
(758 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_0134 - 14071190-14071435,14071800-14071988,14072114-140721... 31 0.75
04_04_0987 + 29938486-29938505,29938667-29938859,29938961-29941036 31 0.75
01_06_1625 + 38729803-38731115,38731202-38731391,38731472-387315... 31 0.75
09_03_0043 + 11851889-11852790,11853388-11853877 30 1.7
06_01_0424 + 3041296-3041860,3042701-3042786,3042858-3043147,304... 30 2.3
01_06_0678 - 31114259-31114321,31114508-31114552,31114644-311147... 30 2.3
08_01_0380 - 3376475-3377116,3377722-3377919,3378381-3378556,337... 29 3.0
10_05_0085 - 9005539-9005922,9006207-9006463,9006707-9006883,900... 29 4.0
01_01_0384 - 2970369-2970726,2970812-2970882,2971428-2971509,297... 29 4.0
12_02_0479 - 19522172-19523158 29 5.3
07_01_0641 - 4790704-4790720,4790824-4791296,4791707-4792023,479... 29 5.3
11_01_0110 + 850780-850805,851465-851537,851558-851720,851947-85... 28 7.0
>12_02_0134 - 14071190-14071435,14071800-14071988,14072114-14072194,
14072261-14072404,14072528-14072761,14072836-14073981,
14074863-14074922,14075178-14075420,14075509-14075607,
14076196-14076367,14076597-14076735,14077514-14077624,
14077695-14077797,14077885-14077962,14078054-14078122,
14078203-14078275,14078891-14078975,14079473-14079536,
14079963-14080073,14080139-14080213,14080306-14080398,
14080982-14081056,14081172-14081261
Length = 1259
Score = 31.5 bits (68), Expect = 0.75
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 5/70 (7%)
Frame = +2
Query: 287 KKSKEPIDQEKLKK-LSVIDD----SDELFENGHYEECYNLLKNYEENQDIEIQWRICRA 451
K K PI +E L L ++ D S + +E LKN+ N+D +++ + C A
Sbjct: 1014 KLLKGPIAKETLLDFLMIVSDLARMSKDFYEPIDKAGMVGYLKNFLSNEDPDLRAKACSA 1073
Query: 452 LYNMAKESKY 481
+ NM + S Y
Sbjct: 1074 IGNMCRHSSY 1083
>04_04_0987 + 29938486-29938505,29938667-29938859,29938961-29941036
Length = 762
Score = 31.5 bits (68), Expect = 0.75
Identities = 16/73 (21%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Frame = +2
Query: 290 KSKEPIDQEKLKKLSVIDDSDELFENGHYEECYNLLKNYEENQDIEI---QWRICRALYN 460
++KE + EK+K+LSV+ ++ + NG ++E N+ + E+++ + + W + +
Sbjct: 636 QAKELVASEKIKELSVLANAKDGATNGSHKEESNVKGDSEDDEPVMVVAKMWENSKVTDD 695
Query: 461 MAKESKYNNAQKK 499
+ + K N+ + +
Sbjct: 696 ASSKEKGNDGESE 708
>01_06_1625 + 38729803-38731115,38731202-38731391,38731472-38731504,
38731582-38732199,38732304-38733011
Length = 953
Score = 31.5 bits (68), Expect = 0.75
Identities = 18/77 (23%), Positives = 36/77 (46%)
Frame = +2
Query: 467 KESKYNNAQKKDFIFQAYEIICKHLNNNENNFAVHKWYALILDAKSHHNGIKERIQQLEN 646
KE +Y + + + A+ + C L ++ A KW + LD H G+KERI ++
Sbjct: 859 KEGEYPVEEGQWLVATAWNMSCLPLRLHQAKVA-RKWMKMGLDLARHLEGMKERIASMQT 917
Query: 647 VKKHMDLAVTLNPNDAT 697
++ + P++ +
Sbjct: 918 TFENFERVSGDEPDECS 934
>09_03_0043 + 11851889-11852790,11853388-11853877
Length = 463
Score = 30.3 bits (65), Expect = 1.7
Identities = 18/71 (25%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
Frame = +2
Query: 350 DELFENGHYEECYNLLKNYEENQDIEIQWRICRA--LYNMAKESKYNNAQKKDFIFQAYE 523
D L+ CY + ++EN+ W++ A L ++ ES+ +N K +
Sbjct: 182 DPLYPKKPQTACYEMDAPWQENRKSRPWWQVAEADGLASVVAESEMHNVGKNELPRPTQR 241
Query: 524 IICKHLNNNEN 556
LNN+EN
Sbjct: 242 AHGSKLNNHEN 252
>06_01_0424 +
3041296-3041860,3042701-3042786,3042858-3043147,
3043225-3043285,3043773-3043868,3044448-3044603,
3044811-3044987
Length = 476
Score = 29.9 bits (64), Expect = 2.3
Identities = 23/87 (26%), Positives = 37/87 (42%)
Frame = +2
Query: 395 LKNYEENQDIEIQWRICRALYNMAKESKYNNAQKKDFIFQAYEIICKHLNNNENNFAVHK 574
LK+ +N I R C A MAK+S +A KD EI C H NE K
Sbjct: 299 LKHDPQNLSIHNSLRECAARIKMAKDS---DAIAKDLTKHQREIECLHKQLNEGENKASK 355
Query: 575 WYALILDAKSHHNGIKERIQQLENVKK 655
+ + ++ + +++QL + +
Sbjct: 356 ERSRRMKSEKLVKTLSSQVEQLRSANE 382
>01_06_0678 -
31114259-31114321,31114508-31114552,31114644-31114742,
31114827-31114872,31115026-31115102,31115385-31115432,
31120640-31120708,31120848-31120853,31120955-31121032,
31121246-31121344,31121427-31121489,31122642-31122713,
31122800-31122874,31122965-31123021,31123983-31124186,
31124317-31124394,31124485-31124547,31124646-31125284,
31125367-31125416,31125496-31125576,31125896-31125923
Length = 679
Score = 29.9 bits (64), Expect = 2.3
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Frame = +2
Query: 344 DSDELFENGHYEECYNLLKNY-EENQDIEIQW-RICRALYNMAKESKYNNAQKKDFIFQA 517
DS + + EE LLKN + Q E + R+C L + +E K NAQ ++ + Q
Sbjct: 254 DSGSVKDQDQLEEARGLLKNVVKTGQSKEARLARVCAGLSSRLQEYKSENAQLEELLVQE 313
Query: 518 YE 523
E
Sbjct: 314 RE 315
>08_01_0380 -
3376475-3377116,3377722-3377919,3378381-3378556,
3378681-3379703,3380476-3380593
Length = 718
Score = 29.5 bits (63), Expect = 3.0
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +2
Query: 131 YKNLYPILTKVICFSSDLLKPNRIKVARE--ITQIQFPRNLIF 253
YKNL+ + C LLK NRIK+ +E + I PRN F
Sbjct: 527 YKNLWIDAERTNCELKYLLKQNRIKIGQESSMAHIGGPRNPSF 569
>10_05_0085 -
9005539-9005922,9006207-9006463,9006707-9006883,
9007349-9007490,9007814-9007904,9009024-9010942
Length = 989
Score = 29.1 bits (62), Expect = 4.0
Identities = 39/162 (24%), Positives = 71/162 (43%), Gaps = 10/162 (6%)
Frame = +2
Query: 257 STGLAFLWPIKKSKEPIDQEKLKKLSVIDDSDELFENGHYEECYNLLKN-------YEEN 415
S G+ F+ P+K S E E+ K +S + +S L + +Y N +N Y+
Sbjct: 89 SKGITFMSPLKISSEERAGEEWK-ISDLIESKTLSQPENYISYQNSKRNTSIRFINYKPR 147
Query: 416 --QDIEIQWRICRALYNMAKE-SKYNNAQKKDFIFQAYEIICKHLNNNENNFAVHKWYAL 586
D+E + + N S++ ++ + YE K +N NN +W
Sbjct: 148 TTDDLETEASDRNIIDNRRHSVSEFMEKLDQESEIKYYENKLKEINEEYNNSMKCEW-TK 206
Query: 587 ILDAKSHHNGIKERIQQLENVKKHMDLAVTLNPNDATTLHML 712
I D + + KE + +++ VKK+ D+AV + N T + +
Sbjct: 207 IRDKELYF--YKE-LARVKKVKKNEDMAVEIFKNQETKIEQI 245
>01_01_0384 -
2970369-2970726,2970812-2970882,2971428-2971509,
2971757-2971818,2972308-2972401,2972502-2972569,
2972681-2972747,2972830-2972960,2973093-2973200,
2973577-2973642,2973706-2973774,2973990-2974115,
2974167-2974284,2974741-2974847,2975889-2976009,
2976162-2976235,2976955-2977051,2977564-2977679,
2978218-2978313,2978426-2978635,2979101-2979253
Length = 797
Score = 29.1 bits (62), Expect = 4.0
Identities = 14/57 (24%), Positives = 29/57 (50%)
Frame = +2
Query: 377 EECYNLLKNYEENQDIEIQWRICRALYNMAKESKYNNAQKKDFIFQAYEIICKHLNN 547
E+ + L +Y E ++ + R N K +KY+ + K+ + + E IC +++N
Sbjct: 513 EDTWQLQSSYNEQKEKRTNDELERCTDNFLKLTKYHLSTFKEILSPSIERICTYVDN 569
>12_02_0479 - 19522172-19523158
Length = 328
Score = 28.7 bits (61), Expect = 5.3
Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = -1
Query: 611 CDGFLHLKLEHTICALQNYFHCYL-SACKLSHMLEI 507
C+GFL + IC L C + CK+SH ++
Sbjct: 282 CEGFLIAYIYSIICVLDTVITCMVYQTCKMSHSCDL 317
>07_01_0641 -
4790704-4790720,4790824-4791296,4791707-4792023,
4792094-4792423
Length = 378
Score = 28.7 bits (61), Expect = 5.3
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +2
Query: 299 EPIDQEKLKKLSVIDDSDELFENGHY-EECYNLLKNYEENQDI 424
EPI +EK +K D+D + E G E CY + +DI
Sbjct: 328 EPIVEEKFEKFEWDSDNDNVLEPGSMRENCYIYFLGFHPYKDI 370
>11_01_0110 + 850780-850805,851465-851537,851558-851720,851947-852260,
852330-852409,852506-852848,853068-853166,853240-853360,
853567-853723,853976-854099,855275-855368,855866-857259,
857882-857924,858240-858458,859379-859605,859701-859948,
860246-860552,860725-861153
Length = 1486
Score = 28.3 bits (60), Expect = 7.0
Identities = 26/93 (27%), Positives = 40/93 (43%), Gaps = 3/93 (3%)
Frame = +2
Query: 134 KNLYPILTKVICFSSDLLKPNRIKVAREITQIQFPRNLIFISTGLAFLW---PIKKSKEP 304
+NL + CF S K I Q R F+ GL+ LW P K S+E
Sbjct: 1196 RNLSADVIARACFGSSFTKGEEIFCKLRQLQKAIARQDSFV--GLSALWKYLPTKSSQEI 1253
Query: 305 IDQEKLKKLSVIDDSDELFENGHYEECYNLLKN 403
++ +L ++D + E HY++ +N L N
Sbjct: 1254 QMLDEQVRLLILDVAKE---QHHYQDSHNSLVN 1283
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,725,237
Number of Sequences: 37544
Number of extensions: 342999
Number of successful extensions: 781
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 759
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 780
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2027850416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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