Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc7e15
         (758 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_46751| Best HMM Match : No HMM Matches (HMM E-Value=.)              78   9e-15
SB_13249| Best HMM Match : Toxin_24 (HMM E-Value=8.7)                  42   5e-04
SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)              36   0.047
SB_53656| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.25 
SB_44315| Best HMM Match : M (HMM E-Value=2.2e-10)                     30   2.3  
SB_51115| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.1  
SB_40923| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.29)           29   5.4  
SB_27889| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   5.4  
SB_44669| Best HMM Match : 7tm_1 (HMM E-Value=9.5e-26)                 28   7.2  
SB_9124| Best HMM Match : No HMM Matches (HMM E-Value=.)               28   7.2  
SB_57606| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   9.5  
SB_36658| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   9.5  
SB_33687| Best HMM Match : Filament (HMM E-Value=0.1)                  28   9.5  
SB_17753| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   9.5  
SB_13402| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   9.5  

>SB_46751| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 400

 Score = 77.8 bits (183), Expect = 9e-15
 Identities = 35/110 (31%), Positives = 60/110 (54%)
 Frame = +2

Query: 338 IDDSDELFENGHYEECYNLLKNYEENQDIEIQWRICRALYNMAKESKYNNAQKKDFIFQA 517
           ++ +DELF+N   +E Y +L  ++E+      WR+ RA  N A+ +K  N +KK F ++A
Sbjct: 115 LEKADELFDNNAIDELYEVLIKFKESDKAGTMWRLARAARNKAERAKDGN-EKKKFTYEA 173

Query: 518 YEIICKHLNNNENNFAVHKWYALILDAKSHHNGIKERIQQLENVKKHMDL 667
            E   K +  ++ +FA HKWYA+ +       G K +IQ    ++ H  +
Sbjct: 174 LEYAKKSVELDDRDFACHKWYAITVSNVGDFEGTKTKIQNAYTIRDHFQM 223


>SB_13249| Best HMM Match : Toxin_24 (HMM E-Value=8.7)
          Length = 152

 Score = 41.9 bits (94), Expect = 5e-04
 Identities = 25/110 (22%), Positives = 58/110 (52%), Gaps = 1/110 (0%)
 Frame = +2

Query: 332 SVIDDSDELFENGHYEECYN-LLKNYEENQDIEIQWRICRALYNMAKESKYNNAQKKDFI 508
           S+I+  D+ +E     E +   ++  +E ++ E+ WR+ RA   +A  +  ++ +K+ ++
Sbjct: 6   SIIEKLDKEYEEAVTSEKFKESIEANKETKEPEVLWRLSRASRVVADRTT-DSTEKQTYV 64

Query: 509 FQAYEIICKHLNNNENNFAVHKWYALILDAKSHHNGIKERIQQLENVKKH 658
               E   + +  ++ N   HKW+A+ L   +   G +E+++ +  VK+H
Sbjct: 65  NMIKEFASRGIEIDDKNSGCHKWFAMGLMQAA--GGPQEKMKNVHIVKEH 112


>SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 697

 Score = 35.5 bits (78), Expect = 0.047
 Identities = 21/116 (18%), Positives = 53/116 (45%), Gaps = 2/116 (1%)
 Frame = +2

Query: 140 LYPILTKVICFSSDLLKPNRIKVAREITQIQFPRNLIFISTGLAFLWPIKKSKEPIDQEK 319
           L+ ++++V      LL  +    A  +  +      + +   +     +   ++ +   +
Sbjct: 279 LWELISQVFTHGKPLLYTHSTAAAAIVAIVAVVAVAVVVVVVVVVDTSVTNQEKHVSNIQ 338

Query: 320 LKKLSVIDDSDELFENGHYEECYNLLK--NYEENQDIEIQWRICRALYNMAKESKY 481
           L +  VID++D + E GHYEE  ++L+  + +++ ++E+         N + E +Y
Sbjct: 339 LLRYLVIDEADRMVEQGHYEELSSILELIHLKKSGNMEVDQEDAERPSNSSSEKRY 394


>SB_53656| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 51

 Score = 33.1 bits (72), Expect = 0.25
 Identities = 13/35 (37%), Positives = 23/35 (65%)
 Frame = +2

Query: 296 KEPIDQEKLKKLSVIDDSDELFENGHYEECYNLLK 400
           +E +   +L +  VID++D + E GHYEE  ++L+
Sbjct: 2   EEHVSNVQLLRYLVIDEADRMVEQGHYEELSSILE 36


>SB_44315| Best HMM Match : M (HMM E-Value=2.2e-10)
          Length = 2155

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 32/131 (24%), Positives = 59/131 (45%), Gaps = 1/131 (0%)
 Frame = +2

Query: 287  KKSKEPIDQEKLKKLSVIDDSDELFENGHYEECYNLLKNYEENQDIEIQWRICRALYNMA 466
            +K +  I  +K +KL  + + D+L E    E+  +L K+ + NQ I+ +     A Y  A
Sbjct: 724  EKERSEILNDKYQKL--VQEKDKLIE----EQAQDLEKSKQANQAIKDERVALEASYAEA 777

Query: 467  KESKYNNAQKKDFIFQAYEIICKHLNNNENNFAVHKWYALILDAKSHHNGI-KERIQQLE 643
                    ++KD +    +   K +   E   A+ +  ALI   +     +  E  +QL+
Sbjct: 778  VMGSERTMKEKDALLDELDQAKKEIQQYEEGTALEQKSALIHTLEDKLRELATEHEKQLQ 837

Query: 644  NVKKHMDLAVT 676
            ++K   D +VT
Sbjct: 838  SLK--TDFSVT 846


>SB_51115| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1088

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 15/50 (30%), Positives = 24/50 (48%)
 Frame = +3

Query: 345 TLMSCLKTDIMRNAIIYSKIMRKTRTLKFNGVSVVHYTTWQKNLSITMHK 494
           ++ SC ++ I  N  IY  +++ T   K  GV V     W +  SI + K
Sbjct: 57  SVRSCKRSPIETNYSIYGHVLKLTPAQKDLGVVVARDLKWSEQSSIAVSK 106


>SB_40923| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.29)
          Length = 690

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 16/48 (33%), Positives = 26/48 (54%)
 Frame = +2

Query: 551 ENNFAVHKWYALILDAKSHHNGIKERIQQLENVKKHMDLAVTLNPNDA 694
           ++N + H+   L+L AK H   +KE  QQLE ++K     +T    +A
Sbjct: 480 DSNKSTHENELLVLKAK-HEEELKETKQQLEELEKEKSEKLTKEQEEA 526


>SB_27889| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 234

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 11/28 (39%), Positives = 22/28 (78%)
 Frame = +2

Query: 284 IKKSKEPIDQEKLKKLSVIDDSDELFEN 367
           I+  ++ +++E +KK+SVIDDS E+ ++
Sbjct: 103 IQYQQKIMEKESMKKMSVIDDSPEVIDD 130


>SB_44669| Best HMM Match : 7tm_1 (HMM E-Value=9.5e-26)
          Length = 308

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 14/27 (51%), Positives = 17/27 (62%)
 Frame = -3

Query: 702 KVVASLGFSVTARSICFLTFSSC*ILS 622
           KVV  LG  + A +ICFL FS   +LS
Sbjct: 219 KVVKLLGLVILAHNICFLPFSVVSLLS 245


>SB_9124| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 212

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = -1

Query: 665 DPYVF*HSQVVEFSLLCHCDGFLHLKLEHTICALQNYFH 549
           DPY      +++  L+  CD FLH   E ++ AL  Y++
Sbjct: 109 DPYTVGSQVLIDILLMSKCDLFLH--AESSVAALVTYYN 145


>SB_57606| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 308

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 16/65 (24%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
 Frame = +2

Query: 323 KKLSVIDDSDELFENGHYEECYNLLKNYEE-NQDIEIQWRICRALYNMAKESKYNNAQKK 499
           +++ +  D +       +EECYNL K+ EE N+  +    +C  +  + KE      +KK
Sbjct: 240 RRVCMFTDPENCLSYEKWEECYNLQKDVEECNKIWKCTHPVCGGV-GVVKEGVGGGGKKK 298

Query: 500 DFIFQ 514
             + +
Sbjct: 299 KSLLE 303


>SB_36658| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 698

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 15/62 (24%), Positives = 32/62 (51%)
 Frame = +2

Query: 518 YEIICKHLNNNENNFAVHKWYALILDAKSHHNGIKERIQQLENVKKHMDLAVTLNPNDAT 697
           ++ +C  +N++ ++ A+H    + LD   + N     I+     + ++ L  T+ P+D T
Sbjct: 332 FDALCS-VNSSSDDHAIH---GISLDHHLYDNLSNRWIRSASQPQPYISLTATIQPDDYT 387

Query: 698 TL 703
           TL
Sbjct: 388 TL 389


>SB_33687| Best HMM Match : Filament (HMM E-Value=0.1)
          Length = 700

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
 Frame = +2

Query: 290 KSKEPIDQEKLKKLSVIDDSDELFENGHY--EECYNLLKNYEENQD 421
           K+K  +D+E   K + I  S E  E  HY   +C  L K  E+  +
Sbjct: 400 KAKSMMDEETKHKENAIKRSKEFEERSHYFESQCSTLAKELEQRNN 445


>SB_17753| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 243

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +2

Query: 542 NNNENNFAVHKWYALILDAKSHHN 613
           NNN NNF + +   ++ +  SHHN
Sbjct: 155 NNNNNNFIIIRDSGIVRNHSSHHN 178


>SB_13402| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 88

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +2

Query: 668 AVTLNPNDATTLHMLGEWCY 727
           A+ LNPND    H+LG W +
Sbjct: 2   AIDLNPNDPHAHHVLGTWFF 21


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,917,619
Number of Sequences: 59808
Number of extensions: 446510
Number of successful extensions: 1080
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1003
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1076
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2070332524
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)