Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc7e15
(758 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81526-3|CAB04261.2| 301|Caenorhabditis elegans Hypothetical pr... 112 2e-25
Z81042-5|CAD44090.1| 331|Caenorhabditis elegans Hypothetical pr... 71 1e-12
Z81042-4|CAB02796.1| 272|Caenorhabditis elegans Hypothetical pr... 71 1e-12
AC006681-5|AAK85491.1| 225|Caenorhabditis elegans Hypothetical ... 58 5e-09
Z49907-3|CAA90085.1| 225|Caenorhabditis elegans Hypothetical pr... 57 1e-08
Z27079-7|CAA81592.1| 293|Caenorhabditis elegans Hypothetical pr... 52 4e-07
AF078790-2|AAC26940.1| 215|Caenorhabditis elegans Hypothetical ... 50 2e-06
U88309-4|AAB42330.1| 256|Caenorhabditis elegans Hypothetical pr... 41 0.001
AL032642-2|CAA21653.1| 332|Caenorhabditis elegans Hypothetical ... 33 0.29
AL032642-1|CAA21651.2| 461|Caenorhabditis elegans Hypothetical ... 33 0.29
Z71262-10|CAA95816.4| 436|Caenorhabditis elegans Hypothetical p... 32 0.38
AY037801-1|AAK94766.1| 436|Caenorhabditis elegans GLY-19 protein. 32 0.38
Z81136-5|CAB03460.2| 733|Caenorhabditis elegans Hypothetical pr... 31 0.67
Z81123-1|CAB03364.2| 405|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z75525-2|CAA99763.1| 1390|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z50739-1|CAA90604.1| 400|Caenorhabditis elegans Hypothetical pr... 29 3.6
U50309-2|AAG24136.2| 334|Caenorhabditis elegans Seven tm recept... 28 6.3
U28735-10|AAM69112.1| 2427|Caenorhabditis elegans Hypothetical p... 28 6.3
AF548287-1|AAN40683.1| 2238|Caenorhabditis elegans poly ADP-ribo... 28 6.3
AF047664-2|AAC04454.2| 2276|Caenorhabditis elegans Poly(adp-ribo... 28 6.3
AF047664-1|AAO12392.1| 2238|Caenorhabditis elegans Poly(adp-ribo... 28 6.3
Z82266-6|CAB05176.1| 393|Caenorhabditis elegans Hypothetical pr... 28 8.3
Z81592-1|CAB04725.1| 695|Caenorhabditis elegans Hypothetical pr... 28 8.3
U80452-1|AAB37864.1| 270|Caenorhabditis elegans Hypothetical pr... 28 8.3
AF000266-4|ABB51177.1| 403|Caenorhabditis elegans Hypothetical ... 28 8.3
>Z81526-3|CAB04261.2| 301|Caenorhabditis elegans Hypothetical
protein F33H2.6 protein.
Length = 301
Score = 112 bits (270), Expect = 2e-25
Identities = 53/131 (40%), Positives = 81/131 (61%), Gaps = 2/131 (1%)
Frame = +2
Query: 335 VIDDSDELFENGHYEECYNLLKNYEENQDIEIQWRICRALYNMAKESKYNNAQKKDFIFQ 514
++ +SDEL++N + CYN+LK +E + E+ WR+ R + K SK N Q+K+ I +
Sbjct: 68 IVRNSDELYDNYLIDNCYNILKKFENSNCSELLWRLARVVCEKGKLSKDQN-QRKELILE 126
Query: 515 AYEIICKHLNNNENN--FAVHKWYALILDAKSHHNGIKERIQQLENVKKHMDLAVTLNPN 688
AY I+ K L+N N F HKWYA++LD G K RI++ V+KH++ A+++ N
Sbjct: 127 AYGIVKKALDNEPKNGCFGAHKWYAILLDYVGEIEGNKSRIEKSFQVRKHLEKALSIFEN 186
Query: 689 DATTLHMLGEW 721
D TT H+LG W
Sbjct: 187 DPTTWHILGVW 197
>Z81042-5|CAD44090.1| 331|Caenorhabditis elegans Hypothetical
protein C27H6.4b protein.
Length = 331
Score = 70.5 bits (165), Expect = 1e-12
Identities = 35/134 (26%), Positives = 70/134 (52%), Gaps = 2/134 (1%)
Frame = +2
Query: 326 KLSVIDDSDELFENGHYEECYNLLKN-YEENQ-DIEIQWRICRALYNMAKESKYNNAQKK 499
K +D D LF +E Y+ LK Y+ + I++ WR+ + + ++ ++K
Sbjct: 105 KTMSFEDLDALFGTDRVQEGYDALKKRYDAGEKSIDVLWRLAKFCNEIG--NRVEKDKRK 162
Query: 500 DFIFQAYEIICKHLNNNENNFAVHKWYALILDAKSHHNGIKERIQQLENVKKHMDLAVTL 679
D I + + + N + NNF +W AL+ + + G KE+I++ ++ K+++D A+++
Sbjct: 163 DIIVEGKKYATEAWNTDSNNFLAARWAALMSGKVTEYLGTKEKIEEGKHCKEYLDRAISI 222
Query: 680 NPNDATTLHMLGEW 721
P + LH+ G W
Sbjct: 223 QPKEDALLHLRGRW 236
>Z81042-4|CAB02796.1| 272|Caenorhabditis elegans Hypothetical
protein C27H6.4a protein.
Length = 272
Score = 70.5 bits (165), Expect = 1e-12
Identities = 35/134 (26%), Positives = 70/134 (52%), Gaps = 2/134 (1%)
Frame = +2
Query: 326 KLSVIDDSDELFENGHYEECYNLLKN-YEENQ-DIEIQWRICRALYNMAKESKYNNAQKK 499
K +D D LF +E Y+ LK Y+ + I++ WR+ + + ++ ++K
Sbjct: 46 KTMSFEDLDALFGTDRVQEGYDALKKRYDAGEKSIDVLWRLAKFCNEIG--NRVEKDKRK 103
Query: 500 DFIFQAYEIICKHLNNNENNFAVHKWYALILDAKSHHNGIKERIQQLENVKKHMDLAVTL 679
D I + + + N + NNF +W AL+ + + G KE+I++ ++ K+++D A+++
Sbjct: 104 DIIVEGKKYATEAWNTDSNNFLAARWAALMSGKVTEYLGTKEKIEEGKHCKEYLDRAISI 163
Query: 680 NPNDATTLHMLGEW 721
P + LH+ G W
Sbjct: 164 QPKEDALLHLRGRW 177
>AC006681-5|AAK85491.1| 225|Caenorhabditis elegans Hypothetical
protein R13H9.1 protein.
Length = 225
Score = 58.4 bits (135), Expect = 5e-09
Identities = 31/131 (23%), Positives = 66/131 (50%), Gaps = 2/131 (1%)
Frame = +2
Query: 341 DDSDELFENGHYEECYNLLKNYEENQD--IEIQWRICRALYNMAKESKYNNAQKKDFIFQ 514
D+ D+ F + ++ Y+LLK + D +E+ WR+ + ++ K + AQ+K + +
Sbjct: 4 DEIDKTFGTKNRDQGYDLLKARLDKGDRSVEVLWRLAQVIHE--KSACVPKAQRKASVTE 61
Query: 515 AYEIICKHLNNNENNFAVHKWYALILDAKSHHNGIKERIQQLENVKKHMDLAVTLNPNDA 694
+ + + + N+F KW A++ + + KE+++ + K+ +D A+ P D
Sbjct: 62 GLKFAEEAVQKDPNHFKALKWNAVLTGQATEYMATKEKLECSKKFKELLDKALAKEPKDT 121
Query: 695 TTLHMLGEWCY 727
LH+ G + Y
Sbjct: 122 ALLHLRGRYKY 132
>Z49907-3|CAA90085.1| 225|Caenorhabditis elegans Hypothetical
protein B0491.3 protein.
Length = 225
Score = 57.2 bits (132), Expect = 1e-08
Identities = 30/131 (22%), Positives = 65/131 (49%), Gaps = 2/131 (1%)
Frame = +2
Query: 341 DDSDELFENGHYEECYNLLKNYEENQD--IEIQWRICRALYNMAKESKYNNAQKKDFIFQ 514
D+ D+ F + ++ Y+LLK + D +E+ WR+ + ++ K + AQ+K + +
Sbjct: 4 DEIDKTFGTKNRDQGYDLLKARLDKGDRSVEVLWRLAQVIHE--KSACVPKAQRKASVTE 61
Query: 515 AYEIICKHLNNNENNFAVHKWYALILDAKSHHNGIKERIQQLENVKKHMDLAVTLNPNDA 694
+ + + + N+F KW A++ + + KE+++ + K+ +D + P D
Sbjct: 62 GLKFAEEAVQKDPNHFKALKWNAVLTGQATEYMATKEKLECSKKFKELLDKTLAKEPKDT 121
Query: 695 TTLHMLGEWCY 727
LH+ G + Y
Sbjct: 122 AVLHLRGRYKY 132
>Z27079-7|CAA81592.1| 293|Caenorhabditis elegans Hypothetical
protein T05G5.7 protein.
Length = 293
Score = 52.0 bits (119), Expect = 4e-07
Identities = 30/136 (22%), Positives = 66/136 (48%), Gaps = 2/136 (1%)
Frame = +2
Query: 326 KLSVIDDSDELFENGHYEECYNLLKNYEENQDI--EIQWRICRALYNMAKESKYNNAQKK 499
K+ SD+LFE+ + + LK E+ ++ ++ WR+CR + ++ + + Q++
Sbjct: 67 KMESFATSDKLFESREFVKGLEELKKRREDGEMTCDLLWRMCRFCHELS--TTMSGEQRR 124
Query: 500 DFIFQAYEIICKHLNNNENNFAVHKWYALILDAKSHHNGIKERIQQLENVKKHMDLAVTL 679
+ + + + ++ + ++F KW A++ KE+I +K +D A+ L
Sbjct: 125 KMLIEGRDYGLEAMDLDPSSFLAAKWTAIMFGLVVDQLPTKEKINDGGRLKDMLDKALEL 184
Query: 680 NPNDATTLHMLGEWCY 727
+P D LH+ + Y
Sbjct: 185 DPTDFALLHLRARFSY 200
>AF078790-2|AAC26940.1| 215|Caenorhabditis elegans Hypothetical
protein F36H12.11 protein.
Length = 215
Score = 49.6 bits (113), Expect = 2e-06
Identities = 28/126 (22%), Positives = 63/126 (50%), Gaps = 2/126 (1%)
Frame = +2
Query: 341 DDSDELFENGHYEECYNLLKNYEENQD--IEIQWRICRALYNMAKESKYNNAQKKDFIFQ 514
D+ D+ F + ++ Y+LLK + D +E+ WR+ + ++ K + AQ+K + +
Sbjct: 4 DEIDKTFGTKNRDQGYDLLKARLDKGDRSVEVLWRLAQVIHE--KSACVPKAQRKASVTE 61
Query: 515 AYEIICKHLNNNENNFAVHKWYALILDAKSHHNGIKERIQQLENVKKHMDLAVTLNPNDA 694
+ + + + N+F KW A++ + + KE+++ + K+ +D A+ P D
Sbjct: 62 GLKFAEEAVQKDPNHFKALKWNAVLTGQATEYMATKEKLECSKKFKELLDKALAKEPKDT 121
Query: 695 TTLHML 712
++ L
Sbjct: 122 YSVASL 127
>U88309-4|AAB42330.1| 256|Caenorhabditis elegans Hypothetical
protein T23B3.3 protein.
Length = 256
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/63 (26%), Positives = 32/63 (50%)
Frame = +2
Query: 539 LNNNENNFAVHKWYALILDAKSHHNGIKERIQQLENVKKHMDLAVTLNPNDATTLHMLGE 718
+ N N+F KW A++ + + KE+++ + K+ +D A+ P D LH+ G
Sbjct: 123 VQKNPNHFKALKWNAVLTGQATEYMATKEKLECSKKFKELLDKALAKEPKDTALLHLRGR 182
Query: 719 WCY 727
+ Y
Sbjct: 183 YKY 185
>AL032642-2|CAA21653.1| 332|Caenorhabditis elegans Hypothetical
protein Y48A6C.3 protein.
Length = 332
Score = 32.7 bits (71), Expect = 0.29
Identities = 27/135 (20%), Positives = 58/135 (42%), Gaps = 2/135 (1%)
Frame = +2
Query: 323 KKLSVIDDSDELFENGHYEECYNLLKNYEENQDIEIQWRICRALYNMAKESKYNNAQK-K 499
+KL + DS + Y +C+ LK ++ + I +CR K + +K K
Sbjct: 107 EKLIAVVDSP-MITRDFYIDCFEALKMRYDSGEKSIDL-LCRLAKLCTKIGNFVEKEKRK 164
Query: 500 DFIFQAYEIICKHLNNNENNFAVHKWYALILDAKSHHNGIKERIQQLENVKKHMDLAVTL 679
D I + + N + N W A++ + E+ ++ + ++++D A+++
Sbjct: 165 DIIIKGKMYATEAWNTDSYNILAAHWAAVMSGKAIEYLEGDEKNLEMRHCRQYLDRAISI 224
Query: 680 NP-NDATTLHMLGEW 721
+A ++LG W
Sbjct: 225 QAGKNAMYNNILGRW 239
>AL032642-1|CAA21651.2| 461|Caenorhabditis elegans Hypothetical
protein Y48A6C.1 protein.
Length = 461
Score = 32.7 bits (71), Expect = 0.29
Identities = 27/135 (20%), Positives = 58/135 (42%), Gaps = 2/135 (1%)
Frame = +2
Query: 323 KKLSVIDDSDELFENGHYEECYNLLKNYEENQDIEIQWRICRALYNMAKESKYNNAQK-K 499
+KL + DS + Y +C+ LK ++ + I +CR K + +K K
Sbjct: 111 EKLIAVVDSP-MITRDFYIDCFEALKMRYDSGEKSIDL-LCRLAKLCTKIGNFVEKEKRK 168
Query: 500 DFIFQAYEIICKHLNNNENNFAVHKWYALILDAKSHHNGIKERIQQLENVKKHMDLAVTL 679
D I + + N + N W A++ + E+ ++ + ++++D A+++
Sbjct: 169 DIIIKGKMYATEAWNTDSYNILAAHWAAVMSGKAIEYLEGDEKNLEMRHCRQYLDRAISI 228
Query: 680 NP-NDATTLHMLGEW 721
+A ++LG W
Sbjct: 229 QAGKNAMYNNILGRW 243
>Z71262-10|CAA95816.4| 436|Caenorhabditis elegans Hypothetical
protein F22D6.12 protein.
Length = 436
Score = 32.3 bits (70), Expect = 0.38
Identities = 16/61 (26%), Positives = 31/61 (50%)
Frame = +2
Query: 248 IFISTGLAFLWPIKKSKEPIDQEKLKKLSVIDDSDELFENGHYEECYNLLKNYEENQDIE 427
+FI + L+P K+ + + ++ LK + L +N C N+LK Y+ N+ ++
Sbjct: 17 LFIYFSVESLFPRKQEDKNVSKQFLKSICTTASDSYLLDNMEIN-CSNILKGYKTNEKLD 75
Query: 428 I 430
I
Sbjct: 76 I 76
>AY037801-1|AAK94766.1| 436|Caenorhabditis elegans GLY-19 protein.
Length = 436
Score = 32.3 bits (70), Expect = 0.38
Identities = 16/61 (26%), Positives = 31/61 (50%)
Frame = +2
Query: 248 IFISTGLAFLWPIKKSKEPIDQEKLKKLSVIDDSDELFENGHYEECYNLLKNYEENQDIE 427
+FI + L+P K+ + + ++ LK + L +N C N+LK Y+ N+ ++
Sbjct: 17 LFIYFSVESLFPRKQEDKNVSKQFLKSICTTASDSYLLDNMEIN-CSNILKGYKTNEKLD 75
Query: 428 I 430
I
Sbjct: 76 I 76
>Z81136-5|CAB03460.2| 733|Caenorhabditis elegans Hypothetical
protein W02B8.4 protein.
Length = 733
Score = 31.5 bits (68), Expect = 0.67
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 8/72 (11%)
Frame = +2
Query: 464 AKESKYNNAQ----KKDFIFQAYEIICKHLNNN----ENNFAVHKWYALILDAKSHHNGI 619
AK S NA+ K DF + II KHL N+ + + KW +IL + + +
Sbjct: 209 AKRSIIRNAESYTLKSDFDKSPFSIITKHLTNSVKALKKKDRISKWQDIILRIQKESSQL 268
Query: 620 KERIQQLENVKK 655
++R +++EN+++
Sbjct: 269 RKR-KEIENLQR 279
>Z81123-1|CAB03364.2| 405|Caenorhabditis elegans Hypothetical
protein T14D7.1 protein.
Length = 405
Score = 30.7 bits (66), Expect = 1.2
Identities = 25/89 (28%), Positives = 38/89 (42%), Gaps = 1/89 (1%)
Frame = +2
Query: 275 LWPIKKSKEPIDQEKLKKLSVIDDSDELFENGHYEECYNLLKNYEENQDIEIQWRICRAL 454
L PI S +++ + +K V + E G+Y C LK Y I + + AL
Sbjct: 234 LAPISFSDRAMEKIRNRKQRVASFYFDAIELGNYWGCDGELKRYHHTAPISTVYALRAAL 293
Query: 455 YNMAKESKYNNAQK-KDFIFQAYEIICKH 538
+AKE + Q+ KD Y + KH
Sbjct: 294 SAIAKEGIDESIQRHKDNAQVLYATLKKH 322
>Z75525-2|CAA99763.1| 1390|Caenorhabditis elegans Hypothetical
protein C03D6.4 protein.
Length = 1390
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/39 (33%), Positives = 25/39 (64%)
Frame = +2
Query: 284 IKKSKEPIDQEKLKKLSVIDDSDELFENGHYEECYNLLK 400
++K + + EKL + + ++ + +L NG YEEC +L+K
Sbjct: 643 LEKLRNMSETEKLMRFNKLETAADLL-NGKYEECSDLIK 680
>Z50739-1|CAA90604.1| 400|Caenorhabditis elegans Hypothetical
protein F13D2.2 protein.
Length = 400
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/39 (33%), Positives = 25/39 (64%)
Frame = +3
Query: 348 LMSCLKTDIMRNAIIYSKIMRKTRTLKFNGVSVVHYTTW 464
++ C+ D +RN I ++I T+T K + VS++ Y++W
Sbjct: 120 IVMCIALDRLRNVIYANQI--HTKTDKISTVSILAYSSW 156
>U50309-2|AAG24136.2| 334|Caenorhabditis elegans Seven tm receptor
protein 146 protein.
Length = 334
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = -3
Query: 243 FLGNCICVISLATFIRFGFNKSLEKQITFVKIGYKFLY 130
F+ IC I+ F+ FG + S+EKQ+ ++K K +Y
Sbjct: 131 FVPCLICFIAWYAFVYFGMHNSIEKQL-YLKDELKTVY 167
>U28735-10|AAM69112.1| 2427|Caenorhabditis elegans Hypothetical
protein F48E3.8a protein.
Length = 2427
Score = 28.3 bits (60), Expect = 6.3
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +1
Query: 553 K*FCSAQMVCSNFRCKKPSQWHKRENS 633
K FC C NF CK P + K+ +S
Sbjct: 1316 KGFCVGGSTCENFMCKCPDDYFKKGDS 1342
>AF548287-1|AAN40683.1| 2238|Caenorhabditis elegans poly ADP-ribose
metabolism enzyme-5 protein.
Length = 2238
Score = 28.3 bits (60), Expect = 6.3
Identities = 18/69 (26%), Positives = 32/69 (46%)
Frame = +2
Query: 155 TKVICFSSDLLKPNRIKVAREITQIQFPRNLIFISTGLAFLWPIKKSKEPIDQEKLKKLS 334
T ++ D PN I++A + ++ I AF PIK++K + Q ++ LS
Sbjct: 1653 TAIVQCLIDKRSPNPIELAAMKMNRRMKSEMLKIVKNAAFPRPIKETKLTLQQVHIEPLS 1712
Query: 335 VIDDSDELF 361
+D+ F
Sbjct: 1713 DVDEDAAKF 1721
>AF047664-2|AAC04454.2| 2276|Caenorhabditis elegans Poly(adp-ribose)
metabolism enzymeprotein 5, isoform a protein.
Length = 2276
Score = 28.3 bits (60), Expect = 6.3
Identities = 18/69 (26%), Positives = 32/69 (46%)
Frame = +2
Query: 155 TKVICFSSDLLKPNRIKVAREITQIQFPRNLIFISTGLAFLWPIKKSKEPIDQEKLKKLS 334
T ++ D PN I++A + ++ I AF PIK++K + Q ++ LS
Sbjct: 1691 TAIVQCLIDKRSPNPIELAAMKMNRRMKSEMLKIVKNAAFPRPIKETKLTLQQVHIEPLS 1750
Query: 335 VIDDSDELF 361
+D+ F
Sbjct: 1751 DVDEDAAKF 1759
>AF047664-1|AAO12392.1| 2238|Caenorhabditis elegans Poly(adp-ribose)
metabolism enzymeprotein 5, isoform b protein.
Length = 2238
Score = 28.3 bits (60), Expect = 6.3
Identities = 18/69 (26%), Positives = 32/69 (46%)
Frame = +2
Query: 155 TKVICFSSDLLKPNRIKVAREITQIQFPRNLIFISTGLAFLWPIKKSKEPIDQEKLKKLS 334
T ++ D PN I++A + ++ I AF PIK++K + Q ++ LS
Sbjct: 1653 TAIVQCLIDKRSPNPIELAAMKMNRRMKSEMLKIVKNAAFPRPIKETKLTLQQVHIEPLS 1712
Query: 335 VIDDSDELF 361
+D+ F
Sbjct: 1713 DVDEDAAKF 1721
>Z82266-6|CAB05176.1| 393|Caenorhabditis elegans Hypothetical
protein F23B2.10 protein.
Length = 393
Score = 27.9 bits (59), Expect = 8.3
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +2
Query: 608 HNGIKERIQQLENVKKHMDLAVTLN 682
+NG+KE + ++N+K+ D+A LN
Sbjct: 155 NNGLKEDVVMMKNIKRLYDIAKALN 179
>Z81592-1|CAB04725.1| 695|Caenorhabditis elegans Hypothetical
protein T16G1.1 protein.
Length = 695
Score = 27.9 bits (59), Expect = 8.3
Identities = 16/46 (34%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Frame = +2
Query: 302 PIDQEKLKKLSVIDDSDELFENGHYEECYNLLK-NYEENQDIEIQW 436
PID+E +K+ ID+ +E E+ EE ++ K + +E+++ EI+W
Sbjct: 119 PIDEEDNEKIFPIDEEEE--EDLKIEEKKSVRKLSSDEDEEEEIEW 162
>U80452-1|AAB37864.1| 270|Caenorhabditis elegans Hypothetical
protein C16C8.18 protein.
Length = 270
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/64 (23%), Positives = 27/64 (42%)
Frame = +2
Query: 536 HLNNNENNFAVHKWYALILDAKSHHNGIKERIQQLENVKKHMDLAVTLNPNDATTLHMLG 715
HL + NF K + + +K+++ K ++D A+ + D HM G
Sbjct: 109 HLTD-PGNFECAKVLCSTCGRLAEESSLKKKLDYGFKFKTYLDEAIAIYDQDFELTHMRG 167
Query: 716 EWCY 727
+CY
Sbjct: 168 RFCY 171
>AF000266-4|ABB51177.1| 403|Caenorhabditis elegans Hypothetical
protein W08F4.8b protein.
Length = 403
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +2
Query: 287 KKSKEPIDQEKLKKLSVIDDSDELFEN 367
K SK PID K K + V DD D+ N
Sbjct: 30 KFSKMPIDYSKWKDIEVSDDEDDTHPN 56
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,911,584
Number of Sequences: 27780
Number of extensions: 365222
Number of successful extensions: 1063
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1023
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1061
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1809061256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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