BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc7e14
(394 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ845188-1|CAH60165.1| 517|Tribolium castaneum putative esteras... 23 1.1
AJ829922-1|CAH25640.1| 193|Tribolium castaneum twist bHLH trans... 23 1.1
AJ845189-1|CAH60166.1| 515|Tribolium castaneum putative esteras... 23 1.4
AJ845187-1|CAH60164.1| 515|Tribolium castaneum esterase protein. 23 1.4
AJ844897-1|CAH59956.1| 517|Tribolium castaneum esterase protein. 23 1.4
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 21 3.3
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 21 5.8
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 21 5.8
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 21 5.8
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 21 5.8
EF222298-1|ABN79658.1| 120|Tribolium castaneum ion transport pe... 20 7.6
AJ005422-1|CAA06528.1| 287|Tribolium castaneum caudal protein p... 20 7.6
>AJ845188-1|CAH60165.1| 517|Tribolium castaneum putative esterase
protein.
Length = 517
Score = 23.0 bits (47), Expect = 1.1
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -3
Query: 62 FCLKSHQALARFPIFFGRSS 3
F ++ H A+FPI+ R S
Sbjct: 385 FAIRQHAVTAKFPIYLYRMS 404
>AJ829922-1|CAH25640.1| 193|Tribolium castaneum twist bHLH
transcription factor protein.
Length = 193
Score = 23.0 bits (47), Expect = 1.1
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +2
Query: 326 KLSXRQVDFLIHALLN 373
KL+ R +DFL H L N
Sbjct: 138 KLAARYIDFLYHVLSN 153
>AJ845189-1|CAH60166.1| 515|Tribolium castaneum putative esterase
protein.
Length = 515
Score = 22.6 bits (46), Expect = 1.4
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -3
Query: 62 FCLKSHQALARFPIFFGRSS 3
F ++ H A+FPI+ R S
Sbjct: 383 FAIRQHAVTAKFPIYLYRIS 402
>AJ845187-1|CAH60164.1| 515|Tribolium castaneum esterase protein.
Length = 515
Score = 22.6 bits (46), Expect = 1.4
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -3
Query: 62 FCLKSHQALARFPIFFGRSS 3
F ++ H A+FPI+ R S
Sbjct: 383 FAIRQHAITAKFPIYLYRMS 402
>AJ844897-1|CAH59956.1| 517|Tribolium castaneum esterase protein.
Length = 517
Score = 22.6 bits (46), Expect = 1.4
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -3
Query: 62 FCLKSHQALARFPIFFGRSS 3
F ++ H A+FPI+ R S
Sbjct: 385 FAIRQHAITAKFPIYLYRMS 404
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
protein protein.
Length = 1156
Score = 21.4 bits (43), Expect = 3.3
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +2
Query: 11 VRKKLEIEQALDAILNKNTSSI 76
VRK LE+E+A N ++SS+
Sbjct: 601 VRKLLELERAQHEFKNGDSSSL 622
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 20.6 bits (41), Expect = 5.8
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +1
Query: 103 VQFNEKLFHRTGQIDNV 153
+QF LFHR G I ++
Sbjct: 1340 IQFVAMLFHRFGTIAHI 1356
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 20.6 bits (41), Expect = 5.8
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +1
Query: 103 VQFNEKLFHRTGQIDNV 153
+QF LFHR G I ++
Sbjct: 1340 IQFVAMLFHRFGTIAHI 1356
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
protein.
Length = 1558
Score = 20.6 bits (41), Expect = 5.8
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +1
Query: 103 VQFNEKLFHRTGQIDNV 153
+QF LFHR G I ++
Sbjct: 1340 IQFVAMLFHRFGTIAHI 1356
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
protein.
Length = 1558
Score = 20.6 bits (41), Expect = 5.8
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +1
Query: 103 VQFNEKLFHRTGQIDNV 153
+QF LFHR G I ++
Sbjct: 1340 IQFVAMLFHRFGTIAHI 1356
>EF222298-1|ABN79658.1| 120|Tribolium castaneum ion transport
peptide isoform B protein.
Length = 120
Score = 20.2 bits (40), Expect = 7.6
Identities = 10/37 (27%), Positives = 14/37 (37%)
Frame = -2
Query: 126 KKFFIKLDILTSTYYQSIELVFLFKIASSACSISNFF 16
K F KLD + Y L + S C + +F
Sbjct: 59 KSIFAKLDSICEDCYMLFREPQLHNLCRSECFSTKYF 95
>AJ005422-1|CAA06528.1| 287|Tribolium castaneum caudal protein
protein.
Length = 287
Score = 20.2 bits (40), Expect = 7.6
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +1
Query: 112 NEKLFHRTGQIDNVHH*G 165
N+K QIDN+ H G
Sbjct: 216 NKKRIEEKSQIDNLFHNG 233
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,095
Number of Sequences: 336
Number of extensions: 1245
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used: 8330471
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
- SilkBase 1999-2023 -