Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc7e14
(394 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_46577| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.3
SB_38872| Best HMM Match : Histone (HMM E-Value=3e-31) 28 2.3
SB_56481| Best HMM Match : Histone (HMM E-Value=8.6e-29) 27 5.4
SB_1957| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.4
SB_57970| Best HMM Match : Histone (HMM E-Value=9.8e-31) 27 7.2
SB_52376| Best HMM Match : Histone (HMM E-Value=3e-30) 27 7.2
SB_51995| Best HMM Match : Histone (HMM E-Value=3.7e-15) 27 7.2
SB_39197| Best HMM Match : Histone (HMM E-Value=4e-29) 27 7.2
SB_35615| Best HMM Match : Histone (HMM E-Value=6.9e-06) 27 7.2
SB_34142| Best HMM Match : Histone (HMM E-Value=4e-29) 27 7.2
SB_32335| Best HMM Match : Histone (HMM E-Value=4e-29) 27 7.2
SB_29672| Best HMM Match : Histone (HMM E-Value=4e-29) 27 7.2
SB_25346| Best HMM Match : Histone (HMM E-Value=4e-29) 27 7.2
SB_24672| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.2
SB_24338| Best HMM Match : Histone (HMM E-Value=9.7e-28) 27 7.2
SB_23111| Best HMM Match : Histone (HMM E-Value=4e-29) 27 7.2
SB_21879| Best HMM Match : Histone (HMM E-Value=1.4e-08) 27 7.2
SB_18888| Best HMM Match : Histone (HMM E-Value=1.4e-30) 27 7.2
SB_18627| Best HMM Match : Histone (HMM E-Value=1.7e-30) 27 7.2
SB_16864| Best HMM Match : Histone (HMM E-Value=4e-29) 27 7.2
SB_16697| Best HMM Match : Collagen (HMM E-Value=4.2e-11) 27 7.2
SB_13575| Best HMM Match : Histone (HMM E-Value=4e-29) 27 7.2
SB_12210| Best HMM Match : Histone (HMM E-Value=1.4e-08) 27 7.2
SB_11336| Best HMM Match : Histone (HMM E-Value=4e-29) 27 7.2
SB_10189| Best HMM Match : Histone (HMM E-Value=4e-29) 27 7.2
SB_7802| Best HMM Match : Histone (HMM E-Value=4e-29) 27 7.2
SB_4428| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.2
SB_3228| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.2
SB_59150| Best HMM Match : Histone (HMM E-Value=4e-29) 27 7.2
SB_55463| Best HMM Match : OPA3 (HMM E-Value=0) 27 7.2
SB_51806| Best HMM Match : Histone (HMM E-Value=4e-29) 27 7.2
SB_49903| Best HMM Match : Histone (HMM E-Value=4e-29) 27 7.2
SB_46692| Best HMM Match : Histone (HMM E-Value=4e-29) 27 7.2
SB_45974| Best HMM Match : Histone (HMM E-Value=1.6e-28) 27 7.2
SB_40749| Best HMM Match : Histone (HMM E-Value=4e-29) 27 7.2
SB_39962| Best HMM Match : Histone (HMM E-Value=4e-29) 27 7.2
SB_25215| Best HMM Match : Histone (HMM E-Value=4e-29) 27 7.2
SB_20041| Best HMM Match : Histone (HMM E-Value=4e-29) 27 7.2
SB_18317| Best HMM Match : Histone (HMM E-Value=4e-29) 27 7.2
SB_14748| Best HMM Match : Histone (HMM E-Value=4e-29) 27 7.2
SB_5066| Best HMM Match : Histone (HMM E-Value=9.8e-31) 27 7.2
SB_2687| Best HMM Match : Histone (HMM E-Value=4e-29) 27 7.2
SB_31726| Best HMM Match : Histone (HMM E-Value=9.6e-32) 26 9.5
SB_26808| Best HMM Match : Histone (HMM E-Value=9.6e-32) 26 9.5
>SB_46577| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 244
Score = 28.3 bits (60), Expect = 2.3
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = -1
Query: 262 KHVNYSFKF--KRKILVRIDLFAQPIAKSGFDHGHLSGERCRFDQF 131
+HV Y KF +R R+ F + +A+ +DH LSG C +QF
Sbjct: 178 EHVQYEHKFDGQRSNGDRMRTF-KAMARVNYDHERLSGGSCDTEQF 222
>SB_38872| Best HMM Match : Histone (HMM E-Value=3e-31)
Length = 242
Score = 28.3 bits (60), Expect = 2.3
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Frame = +2
Query: 203 EQVYPDKDFSLKLKRVINMFLNDEIENDKIYXLVETVDSSNK---LSXRQVDFLIHALLN 373
+QV+PD S K ++N F+ND E +I + NK +S R+V + LL
Sbjct: 43 KQVHPDTGISSKAMGIMNSFVNDIFE--RIAGEASRLAHYNKRSTISSREVQTAVRLLLP 100
Query: 374 NVXVTF 391
TF
Sbjct: 101 AGKTTF 106
>SB_56481| Best HMM Match : Histone (HMM E-Value=8.6e-29)
Length = 125
Score = 27.1 bits (57), Expect = 5.4
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 203 EQVYPDKDFSLKLKRVINMFLNDEIE 280
+QV+PD S K ++N F+ND E
Sbjct: 46 KQVHPDTGISTKAMGIMNSFVNDIFE 71
>SB_1957| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 213
Score = 27.1 bits (57), Expect = 5.4
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Frame = +2
Query: 203 EQVYPDKDFSLKLKRVINMFLNDEIENDKIYXLVETVDSSNK---LSXRQVDFLIHALL 370
+QV+PD S K ++N F+ND E +I + NK +S R+V + LL
Sbjct: 43 KQVHPDTGISSKAMGIMNSFVNDIFE--RIAGEASRLAHYNKRSTISSREVQTAVRLLL 99
>SB_57970| Best HMM Match : Histone (HMM E-Value=9.8e-31)
Length = 118
Score = 26.6 bits (56), Expect = 7.2
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Frame = +2
Query: 206 QVYPDKDFSLKLKRVINMFLNDEIENDKIYXLVETVDSSNK---LSXRQVDFLIHALL 370
QV+PD S K ++N F+ND E +I + NK +S R+V + LL
Sbjct: 40 QVHPDTGISSKAMGIMNSFVNDIFE--RIAGEASRLAHYNKKHTISSREVQTAVRLLL 95
>SB_52376| Best HMM Match : Histone (HMM E-Value=3e-30)
Length = 122
Score = 26.6 bits (56), Expect = 7.2
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 203 EQVYPDKDFSLKLKRVINMFLNDEIE 280
+QV+PD S K ++N F+ND E
Sbjct: 43 KQVHPDTGISSKAMGIMNCFVNDIFE 68
>SB_51995| Best HMM Match : Histone (HMM E-Value=3.7e-15)
Length = 138
Score = 26.6 bits (56), Expect = 7.2
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 203 EQVYPDKDFSLKLKRVINMFLNDEIE 280
+QV+PD S K ++N F+ND E
Sbjct: 43 KQVHPDTGISSKAMGIMNSFVNDIFE 68
>SB_39197| Best HMM Match : Histone (HMM E-Value=4e-29)
Length = 122
Score = 26.6 bits (56), Expect = 7.2
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 203 EQVYPDKDFSLKLKRVINMFLNDEIE 280
+QV+PD S K ++N F+ND E
Sbjct: 43 KQVHPDTGISSKAMGIMNSFVNDIFE 68
>SB_35615| Best HMM Match : Histone (HMM E-Value=6.9e-06)
Length = 122
Score = 26.6 bits (56), Expect = 7.2
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 203 EQVYPDKDFSLKLKRVINMFLNDEIE 280
+QV+PD S K ++N F+ND E
Sbjct: 44 KQVHPDTGISSKAMGIMNSFVNDIFE 69
>SB_34142| Best HMM Match : Histone (HMM E-Value=4e-29)
Length = 122
Score = 26.6 bits (56), Expect = 7.2
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 203 EQVYPDKDFSLKLKRVINMFLNDEIE 280
+QV+PD S K ++N F+ND E
Sbjct: 43 KQVHPDTGISSKAMGIMNSFVNDIFE 68
>SB_32335| Best HMM Match : Histone (HMM E-Value=4e-29)
Length = 122
Score = 26.6 bits (56), Expect = 7.2
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 203 EQVYPDKDFSLKLKRVINMFLNDEIE 280
+QV+PD S K ++N F+ND E
Sbjct: 43 KQVHPDTGISSKAMGIMNSFVNDIFE 68
>SB_29672| Best HMM Match : Histone (HMM E-Value=4e-29)
Length = 122
Score = 26.6 bits (56), Expect = 7.2
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 203 EQVYPDKDFSLKLKRVINMFLNDEIE 280
+QV+PD S K ++N F+ND E
Sbjct: 43 KQVHPDTGISSKAMGIMNSFVNDIFE 68
>SB_25346| Best HMM Match : Histone (HMM E-Value=4e-29)
Length = 122
Score = 26.6 bits (56), Expect = 7.2
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 203 EQVYPDKDFSLKLKRVINMFLNDEIE 280
+QV+PD S K ++N F+ND E
Sbjct: 43 KQVHPDTGISSKAMGIMNSFVNDIFE 68
>SB_24672| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 118
Score = 26.6 bits (56), Expect = 7.2
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Frame = +2
Query: 206 QVYPDKDFSLKLKRVINMFLNDEIENDKIYXLVETVDSSNK---LSXRQVDFLIHALL 370
QV+PD S K ++N F+ND E +I + NK +S R+V + LL
Sbjct: 40 QVHPDTGISSKAMGIMNSFVNDIFE--RIAGEASRLAHYNKKHTISSREVQTAVRLLL 95
>SB_24338| Best HMM Match : Histone (HMM E-Value=9.7e-28)
Length = 100
Score = 26.6 bits (56), Expect = 7.2
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 203 EQVYPDKDFSLKLKRVINMFLNDEIE 280
+QV+PD S K ++N F+ND E
Sbjct: 43 KQVHPDTGISSKAMGIMNSFVNDIFE 68
>SB_23111| Best HMM Match : Histone (HMM E-Value=4e-29)
Length = 122
Score = 26.6 bits (56), Expect = 7.2
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 203 EQVYPDKDFSLKLKRVINMFLNDEIE 280
+QV+PD S K ++N F+ND E
Sbjct: 43 KQVHPDTGISSKAMGIMNSFVNDIFE 68
>SB_21879| Best HMM Match : Histone (HMM E-Value=1.4e-08)
Length = 83
Score = 26.6 bits (56), Expect = 7.2
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 203 EQVYPDKDFSLKLKRVINMFLNDEIE 280
+QV+PD S K ++N F+ND E
Sbjct: 43 KQVHPDTGISSKAMGIMNSFVNDIFE 68
>SB_18888| Best HMM Match : Histone (HMM E-Value=1.4e-30)
Length = 123
Score = 26.6 bits (56), Expect = 7.2
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 203 EQVYPDKDFSLKLKRVINMFLNDEIE 280
+QV+PD S K ++N F+ND E
Sbjct: 44 KQVHPDTGISSKAMGIMNSFVNDIFE 69
>SB_18627| Best HMM Match : Histone (HMM E-Value=1.7e-30)
Length = 279
Score = 26.6 bits (56), Expect = 7.2
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 203 EQVYPDKDFSLKLKRVINMFLNDEIE 280
+QV+PD S K ++N F+ND E
Sbjct: 44 KQVHPDTGISSKAMGIMNCFVNDIFE 69
>SB_16864| Best HMM Match : Histone (HMM E-Value=4e-29)
Length = 125
Score = 26.6 bits (56), Expect = 7.2
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 203 EQVYPDKDFSLKLKRVINMFLNDEIE 280
+QV+PD S K ++N F+ND E
Sbjct: 43 KQVHPDTGISSKAMGIMNSFVNDIFE 68
>SB_16697| Best HMM Match : Collagen (HMM E-Value=4.2e-11)
Length = 1903
Score = 26.6 bits (56), Expect = 7.2
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -1
Query: 184 SGFDHGHLSGERCRFDQFGEKVFH*IGHFNEH 89
S ++H H + C F VF +GHF+ H
Sbjct: 436 SRYEHEHTTKRMCSFRPGSNVVFPFLGHFHFH 467
>SB_13575| Best HMM Match : Histone (HMM E-Value=4e-29)
Length = 122
Score = 26.6 bits (56), Expect = 7.2
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 203 EQVYPDKDFSLKLKRVINMFLNDEIE 280
+QV+PD S K ++N F+ND E
Sbjct: 43 KQVHPDTGISSKAMGIMNSFVNDIFE 68
>SB_12210| Best HMM Match : Histone (HMM E-Value=1.4e-08)
Length = 83
Score = 26.6 bits (56), Expect = 7.2
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 203 EQVYPDKDFSLKLKRVINMFLNDEIE 280
+QV+PD S K ++N F+ND E
Sbjct: 43 KQVHPDTGISSKAMGIMNSFVNDIFE 68
>SB_11336| Best HMM Match : Histone (HMM E-Value=4e-29)
Length = 115
Score = 26.6 bits (56), Expect = 7.2
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 203 EQVYPDKDFSLKLKRVINMFLNDEIE 280
+QV+PD S K ++N F+ND E
Sbjct: 36 KQVHPDTGISSKAMGIMNSFVNDIFE 61
>SB_10189| Best HMM Match : Histone (HMM E-Value=4e-29)
Length = 122
Score = 26.6 bits (56), Expect = 7.2
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 203 EQVYPDKDFSLKLKRVINMFLNDEIE 280
+QV+PD S K ++N F+ND E
Sbjct: 43 KQVHPDTGISSKAMGIMNSFVNDIFE 68
>SB_7802| Best HMM Match : Histone (HMM E-Value=4e-29)
Length = 122
Score = 26.6 bits (56), Expect = 7.2
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 203 EQVYPDKDFSLKLKRVINMFLNDEIE 280
+QV+PD S K ++N F+ND E
Sbjct: 43 KQVHPDTGISSKAMGIMNSFVNDIFE 68
>SB_4428| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 144
Score = 26.6 bits (56), Expect = 7.2
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 203 EQVYPDKDFSLKLKRVINMFLNDEIE 280
+QV+PD S K ++N F+ND E
Sbjct: 65 KQVHPDTGISSKAMGIMNSFVNDIFE 90
>SB_3228| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 122
Score = 26.6 bits (56), Expect = 7.2
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 203 EQVYPDKDFSLKLKRVINMFLNDEIE 280
+QV+PD S K ++N F+ND E
Sbjct: 43 KQVHPDTGISSKAMGIMNSFVNDIFE 68
>SB_59150| Best HMM Match : Histone (HMM E-Value=4e-29)
Length = 122
Score = 26.6 bits (56), Expect = 7.2
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 203 EQVYPDKDFSLKLKRVINMFLNDEIE 280
+QV+PD S K ++N F+ND E
Sbjct: 43 KQVHPDTGISSKAMGIMNSFVNDIFE 68
>SB_55463| Best HMM Match : OPA3 (HMM E-Value=0)
Length = 387
Score = 26.6 bits (56), Expect = 7.2
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 203 EQVYPDKDFSLKLKRVINMFLNDEIE 280
+QV+PD S K ++N F+ND E
Sbjct: 43 KQVHPDTGISSKAMGIMNCFVNDIFE 68
>SB_51806| Best HMM Match : Histone (HMM E-Value=4e-29)
Length = 122
Score = 26.6 bits (56), Expect = 7.2
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 203 EQVYPDKDFSLKLKRVINMFLNDEIE 280
+QV+PD S K ++N F+ND E
Sbjct: 43 KQVHPDTGISSKAMGIMNSFVNDIFE 68
>SB_49903| Best HMM Match : Histone (HMM E-Value=4e-29)
Length = 122
Score = 26.6 bits (56), Expect = 7.2
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 203 EQVYPDKDFSLKLKRVINMFLNDEIE 280
+QV+PD S K ++N F+ND E
Sbjct: 43 KQVHPDTGISSKAMGIMNSFVNDIFE 68
>SB_46692| Best HMM Match : Histone (HMM E-Value=4e-29)
Length = 103
Score = 26.6 bits (56), Expect = 7.2
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 203 EQVYPDKDFSLKLKRVINMFLNDEIE 280
+QV+PD S K ++N F+ND E
Sbjct: 24 KQVHPDTGISSKAMGIMNSFVNDIFE 49
>SB_45974| Best HMM Match : Histone (HMM E-Value=1.6e-28)
Length = 122
Score = 26.6 bits (56), Expect = 7.2
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 203 EQVYPDKDFSLKLKRVINMFLNDEIE 280
+QV+PD S K ++N F+ND E
Sbjct: 43 KQVHPDTGISSKAMGIMNSFVNDIFE 68
>SB_40749| Best HMM Match : Histone (HMM E-Value=4e-29)
Length = 122
Score = 26.6 bits (56), Expect = 7.2
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 203 EQVYPDKDFSLKLKRVINMFLNDEIE 280
+QV+PD S K ++N F+ND E
Sbjct: 43 KQVHPDTGISSKAMGIMNSFVNDIFE 68
>SB_39962| Best HMM Match : Histone (HMM E-Value=4e-29)
Length = 98
Score = 26.6 bits (56), Expect = 7.2
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 203 EQVYPDKDFSLKLKRVINMFLNDEIE 280
+QV+PD S K ++N F+ND E
Sbjct: 19 KQVHPDTGISSKAMGIMNSFVNDIFE 44
>SB_25215| Best HMM Match : Histone (HMM E-Value=4e-29)
Length = 122
Score = 26.6 bits (56), Expect = 7.2
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 203 EQVYPDKDFSLKLKRVINMFLNDEIE 280
+QV+PD S K ++N F+ND E
Sbjct: 43 KQVHPDTGISSKAMGIMNSFVNDIFE 68
>SB_20041| Best HMM Match : Histone (HMM E-Value=4e-29)
Length = 122
Score = 26.6 bits (56), Expect = 7.2
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 203 EQVYPDKDFSLKLKRVINMFLNDEIE 280
+QV+PD S K ++N F+ND E
Sbjct: 43 KQVHPDTGISSKAMGIMNSFVNDIFE 68
>SB_18317| Best HMM Match : Histone (HMM E-Value=4e-29)
Length = 122
Score = 26.6 bits (56), Expect = 7.2
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 203 EQVYPDKDFSLKLKRVINMFLNDEIE 280
+QV+PD S K ++N F+ND E
Sbjct: 43 KQVHPDTGISSKAMGIMNSFVNDIFE 68
>SB_14748| Best HMM Match : Histone (HMM E-Value=4e-29)
Length = 122
Score = 26.6 bits (56), Expect = 7.2
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 203 EQVYPDKDFSLKLKRVINMFLNDEIE 280
+QV+PD S K ++N F+ND E
Sbjct: 43 KQVHPDTGISSKAMGIMNSFVNDIFE 68
>SB_5066| Best HMM Match : Histone (HMM E-Value=9.8e-31)
Length = 118
Score = 26.6 bits (56), Expect = 7.2
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Frame = +2
Query: 206 QVYPDKDFSLKLKRVINMFLNDEIENDKIYXLVETVDSSNK---LSXRQVDFLIHALL 370
QV+PD S K ++N F+ND E +I + NK +S R+V + LL
Sbjct: 40 QVHPDTGISSKAMGIMNSFVNDIFE--RIAGEASRLAHYNKKHTISSREVQTAVRLLL 95
>SB_2687| Best HMM Match : Histone (HMM E-Value=4e-29)
Length = 122
Score = 26.6 bits (56), Expect = 7.2
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 203 EQVYPDKDFSLKLKRVINMFLNDEIE 280
+QV+PD S K ++N F+ND E
Sbjct: 43 KQVHPDTGISSKAMGIMNSFVNDIFE 68
>SB_31726| Best HMM Match : Histone (HMM E-Value=9.6e-32)
Length = 123
Score = 26.2 bits (55), Expect = 9.5
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 203 EQVYPDKDFSLKLKRVINMFLNDEIE 280
+QV+PD S K ++N F+ND E
Sbjct: 44 KQVHPDTGISSKAMVIMNSFVNDIFE 69
>SB_26808| Best HMM Match : Histone (HMM E-Value=9.6e-32)
Length = 123
Score = 26.2 bits (55), Expect = 9.5
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 203 EQVYPDKDFSLKLKRVINMFLNDEIE 280
+QV+PD S K ++N F+ND E
Sbjct: 44 KQVHPDTGISSKAMVIMNSFVNDIFE 69
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,561,231
Number of Sequences: 59808
Number of extensions: 152892
Number of successful extensions: 317
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 249
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 317
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 678472135
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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