Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc7e09
         (718 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          24   1.4  
EF222288-1|ABN79648.1|   73|Tribolium castaneum adipokinetic hor...    23   3.3  
EF222289-1|ABN79649.1|   68|Tribolium castaneum adipokinetic hor...    21   7.6  

>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = +3

Query: 33 SDNRKEKHVSFRARKP 80
          SDN +E+  SF++RKP
Sbjct: 41 SDNDEEERPSFKSRKP 56


>EF222288-1|ABN79648.1|   73|Tribolium castaneum adipokinetic
           hormone 1 protein.
          Length = 73

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 6/20 (30%), Positives = 11/20 (55%)
 Frame = +3

Query: 483 LLLVCFAGICRLYFNVKCNW 542
           ++L+ F G+C    N   +W
Sbjct: 8   VVLIAFVGVCTAQLNFSTDW 27


>EF222289-1|ABN79649.1|   68|Tribolium castaneum adipokinetic
           hormone 2 protein.
          Length = 68

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 7/20 (35%), Positives = 10/20 (50%)
 Frame = +3

Query: 483 LLLVCFAGICRLYFNVKCNW 542
           +LL+   G+C    N   NW
Sbjct: 8   VLLITIVGLCAAQLNFTPNW 27


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,221
Number of Sequences: 336
Number of extensions: 3419
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19051215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)