Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc7d24
         (359 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    23   1.3  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    21   2.9  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    20   6.7  
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    20   8.8  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    20   8.8  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          20   8.8  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    20   8.8  

>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 22.6 bits (46), Expect = 1.3
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +2

Query: 140 GYPAAKLRSYHWSV 181
           G  A+KL S+HW +
Sbjct: 233 GMAASKLNSFHWHI 246


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 21.4 bits (43), Expect = 2.9
 Identities = 11/35 (31%), Positives = 16/35 (45%)
 Frame = -1

Query: 176 TSGRIVILLQDIHIGRILIFECDMTIHHIFCITYG 72
           TS   V+L+ D+H    +IF      HH   +  G
Sbjct: 162 TSMNFVLLIGDLHTSIYIIFFDMFYQHHKIVLDMG 196


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 20.2 bits (40), Expect = 6.7
 Identities = 12/37 (32%), Positives = 16/37 (43%)
 Frame = +3

Query: 81  YAEDVVDRHITFKNQNAPNVDILQQNYDPTTGQ*RLS 191
           YA   +D H      N    DI+Q  Y   TG  R++
Sbjct: 209 YAFATIDPHNFNMISNDDESDIIQGGYISVTGLKRVN 245


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 19.8 bits (39), Expect = 8.8
 Identities = 12/43 (27%), Positives = 17/43 (39%)
 Frame = -3

Query: 165 DRNFAAGYPHWAHFDF*M*YDDPPHLLHNVWVLFRRLPKLEVP 37
           D  FAA   H A     + Y  PP +  + +  +   P   VP
Sbjct: 143 DPAFAASIFHAAATSLPLHYPPPPPVYTHHYARYHPYPNFGVP 185


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 19.8 bits (39), Expect = 8.8
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +2

Query: 242 RRFRNGFKEGKPT 280
           R+F   F+ GKP+
Sbjct: 113 RKFETSFESGKPS 125


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 19.8 bits (39), Expect = 8.8
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +3

Query: 96  VDRHITFKNQNAPN 137
           +DR++ F +QN  N
Sbjct: 796 IDRNVVFSSQNNTN 809


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 19.8 bits (39), Expect = 8.8
 Identities = 6/9 (66%), Positives = 9/9 (100%)
 Frame = +3

Query: 138 VDILQQNYD 164
           +D+LQ+NYD
Sbjct: 1   MDVLQKNYD 9


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,538
Number of Sequences: 336
Number of extensions: 1608
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7299165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)