Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc7d07
(717 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0516 + 3727742-3727936,3729115-3729192,3729292-3729552,372... 154 8e-38
06_03_1062 - 27293119-27293313,27293390-27293548,27293877-272941... 151 7e-37
05_05_0343 - 24234026-24234235,24234254-24234502,24234642-242349... 150 9e-37
01_06_1020 + 33878391-33878582,33879194-33879271,33879363-338795... 106 2e-23
03_05_0710 + 27038709-27038865,27039205-27039346,27039383-270395... 30 2.1
05_05_0091 + 22319411-22320901 29 2.8
10_01_0265 + 2808271-2809064,2809624-2809807 29 3.7
07_03_1378 + 26158233-26158562,26159075-26159176,26159551-261598... 29 4.9
06_03_1011 - 26882011-26882157,26882576-26884248,26884607-268847... 29 4.9
06_01_0182 + 1413551-1413794,1413883-1414139,1414241-1414387,141... 29 4.9
05_06_0193 + 26279105-26279229,26279725-26279833,26280362-262804... 28 6.4
12_02_0726 - 22552005-22552035,22552507-22552598,22552970-225530... 28 8.5
11_08_0024 + 27747449-27747940,27748141-27750177 28 8.5
11_01_0302 + 2261489-2261738,2261917-2262064,2262124-2262205,226... 28 8.5
04_03_0359 - 14864750-14864998,14865122-14865345,14867358-148674... 28 8.5
>02_01_0516 +
3727742-3727936,3729115-3729192,3729292-3729552,
3729921-3730238,3730527-3730685,3730768-3730961,
3731644-3731647
Length = 402
Score = 154 bits (373), Expect = 8e-38
Identities = 91/194 (46%), Positives = 120/194 (61%), Gaps = 3/194 (1%)
Frame = +3
Query: 144 NLTGKRVLMRVDFNVPLKEGV-ITNNQRIVAALDSVKYALDKGAKSVVLMSHLGRPDGQV 320
+L GK+V +R D NVPL + IT++ RI A++ +VK+ L+KGAK V+L SHLGRP G V
Sbjct: 14 DLRGKKVFVRADLNVPLDDAQKITDDTRIRASVPTVKFLLEKGAK-VILASHLGRPKG-V 71
Query: 321 NLKYTLKPVAEELKKLLNKDVTFLNDCIGPEVETACANPSAGSIILLENLRFHIEEEGKG 500
KY+LKP+ L +LL DV NDCIG EVE A G ++LLEN+RF+ EEE
Sbjct: 72 TPKYSLKPLVPRLSELLGVDVVMANDCIGEEVEKLAAALPEGGVLLLENVRFYKEEE--- 128
Query: 501 VDASGAKVKADPEKVKAFRASLRKLGDVYINDAFGTAHRAHSSMVG--EGFEQRASGFLL 674
K DPE F L + D+Y+NDAFGTAHRAH+S G + + +GFL+
Sbjct: 129 --------KNDPE----FAKKLAAVADLYVNDAFGTAHRAHASTEGVTKFLKPAVAGFLM 176
Query: 675 KKELQYFAKALHEP 716
+KEL Y A+ P
Sbjct: 177 QKELDYLVGAVANP 190
>06_03_1062 -
27293119-27293313,27293390-27293548,27293877-27294194,
27294535-27294795,27294901-27294978,27295707-27295901
Length = 401
Score = 151 bits (365), Expect = 7e-37
Identities = 88/194 (45%), Positives = 118/194 (60%), Gaps = 3/194 (1%)
Frame = +3
Query: 144 NLTGKRVLMRVDFNVPLKEGV-ITNNQRIVAALDSVKYALDKGAKSVVLMSHLGRPDGQV 320
+L GK+V +R D NVPL + IT++ RI A++ ++K+ + KGAK V+L SHLGRP G V
Sbjct: 14 DLKGKKVFLRADLNVPLDDSQKITDDTRIRASVPTIKFLMGKGAK-VILASHLGRPKG-V 71
Query: 321 NLKYTLKPVAEELKKLLNKDVTFLNDCIGPEVETACANPSAGSIILLENLRFHIEEEGKG 500
KY+LKP+ L +LL DV NDCIG EV+ A G ++LLEN+RF+ EEE
Sbjct: 72 TPKYSLKPLVPRLSELLGVDVVMANDCIGEEVQKLAATLPDGGVLLLENVRFYKEEE--- 128
Query: 501 VDASGAKVKADPEKVKAFRASLRKLGDVYINDAFGTAHRAHSSMVG--EGFEQRASGFLL 674
K DPE F L + D+Y+NDAFGTAHRAH+S G + +GFL+
Sbjct: 129 --------KNDPE----FANKLASVADLYVNDAFGTAHRAHASTEGVTKYLRPSVAGFLM 176
Query: 675 KKELQYFAKALHEP 716
+KEL Y A+ P
Sbjct: 177 QKELDYLVGAVANP 190
>05_05_0343 -
24234026-24234235,24234254-24234502,24234642-24234959,
24235111-24235371,24235457-24235534,24235834-24236262
Length = 514
Score = 150 bits (364), Expect = 9e-37
Identities = 94/222 (42%), Positives = 129/222 (58%), Gaps = 4/222 (1%)
Frame = +3
Query: 63 RQKASKNQKEFNFLLRMALNKLS-IDALNLTGKRVLMRVDFNVPLKEGV-ITNNQRIVAA 236
RQ AS + + + MA + + A +L GKRV +R D NVPL + IT++ R+ AA
Sbjct: 64 RQAASSSSRGTRAVATMAKKSVGDLTAADLEGKRVFVRADLNVPLDDNQNITDDTRVRAA 123
Query: 237 LDSVKYALDKGAKSVVLMSHLGRPDGQVNLKYTLKPVAEELKKLLNKDVTFLNDCIGPEV 416
+ +++Y + GAK V+L SHLGRP G V K++L P+ L +LL VT D IGP+V
Sbjct: 124 IPTIQYLIKNGAK-VILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVTKAEDVIGPDV 181
Query: 417 ETACANPSAGSIILLENLRFHIEEEGKGVDASGAKVKADPEKVKAFRASLRKLGDVYIND 596
E + GS++LLEN+RF+ EEE K DPE F L L D+Y+ND
Sbjct: 182 EKLVSELPNGSVLLLENVRFYKEEE-----------KNDPE----FAKKLASLADLYVND 226
Query: 597 AFGTAHRAHSSMVG--EGFEQRASGFLLKKELQYFAKALHEP 716
AFGTAHRAH+S G + + +GFLL+KEL Y A+ P
Sbjct: 227 AFGTAHRAHASTEGVTKFLKPSVAGFLLQKELDYLVGAVSSP 268
>01_06_1020 +
33878391-33878582,33879194-33879271,33879363-33879524,
33879789-33880106,33880477-33880671
Length = 314
Score = 106 bits (254), Expect = 2e-23
Identities = 70/169 (41%), Positives = 100/169 (59%), Gaps = 2/169 (1%)
Frame = +3
Query: 138 ALNLTGKRVLMRVDFNVPLKEGV-ITNNQRIVAALDSVKYALDKGAKSVVLMSHLGRPDG 314
A +L GKRVL+R D NVPL IT++ R++AA+ ++K+ + GAK V+L SHLGRP G
Sbjct: 11 AADLEGKRVLLRADLNVPLDASQNITDDTRVIAAIPTIKHLIGNGAK-VILCSHLGRPKG 69
Query: 315 QVNLKYTLKPVAEELKKLLNKDVTFLNDCIGPEVETACANPSAGSIILLENLRFHIEEEG 494
+ K++L P+ L +LL V +D IGPEVE + + GS++LLEN+RF+ EEE
Sbjct: 70 -ITPKFSLAPLVPRLSELLGIQVQKADDVIGPEVEKSVSVLPNGSVLLLENVRFYKEEE- 127
Query: 495 KGVDASGAKVKADPEKVKAFRASLRKLGDV-YINDAFGTAHRAHSSMVG 638
K DPE K ASL L ++ Y+ A R +++VG
Sbjct: 128 ----------KNDPEFAKKL-ASLADLYELDYLVGAVSNPKRPFAAIVG 165
>03_05_0710 +
27038709-27038865,27039205-27039346,27039383-27039558,
27039639-27039703,27040000-27040371,27040429-27040504,
27040505-27040571,27040672-27040825,27041122-27041289,
27041392-27041502,27041612-27041722,27041864-27041881,
27041917-27042018,27042587-27042817,27043390-27043464,
27043744-27043815,27044597-27044782,27044868-27045026,
27045251-27045343,27045730-27045801,27046336-27046426,
27046669-27046847,27047252-27047333,27047526-27047636,
27047715-27047821,27048194-27048271,27048357-27048452,
27048627-27048722,27048839-27048856
Length = 1154
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/52 (28%), Positives = 24/52 (46%)
Frame = +3
Query: 249 KYALDKGAKSVVLMSHLGRPDGQVNLKYTLKPVAEELKKLLNKDVTFLNDCI 404
+Y + V M+H + ++ L +AEE KKLL KD T + +
Sbjct: 687 RYITSSVKSAFVKMAHSVEAKADTSHEHVLASLAEETKKLLKKDTTVFSSVL 738
>05_05_0091 + 22319411-22320901
Length = 496
Score = 29.5 bits (63), Expect = 2.8
Identities = 20/75 (26%), Positives = 30/75 (40%)
Frame = -3
Query: 514 PEASTPLPSSSMWKRRFSSRIIEPAEGLAHAVSTSGPMQSFKNVTSLFSNFFSSSATGLR 335
P PLP + R S ++ P A S SGP+Q + L S+S +R
Sbjct: 245 PGLPPPLPPAEAVHSRLSKLLLHPMSAAAQPRSLSGPIQ--RRDVPLRIEMSSNSCPIIR 302
Query: 334 VYLRFTWPSGLPKCD 290
+ + W + P D
Sbjct: 303 SHCQQPWQTSPPGVD 317
>10_01_0265 + 2808271-2809064,2809624-2809807
Length = 325
Score = 29.1 bits (62), Expect = 3.7
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = -3
Query: 577 PSFLKLALKALTFSGSAFTLAPEASTPLPSSSMWKRRFSSRIIEPAEG 434
P L A A S + F LAP AS +P+ S W R R + A+G
Sbjct: 49 PGLLSSAGSA-PLSTTGFALAPGASQAVPAPSGWSGRMWGRTLCAADG 95
>07_03_1378 +
26158233-26158562,26159075-26159176,26159551-26159850,
26160006-26160068
Length = 264
Score = 28.7 bits (61), Expect = 4.9
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = -3
Query: 664 PLALCSKPSPTIELCALCAVPKASLI*TSPSFLKLALKALTFSGSA 527
P C KP+P C CA+P + + P+ L+ L + + S+
Sbjct: 16 PAVPCPKPAPPASACFPCALPPRAALAAPPAPLRRRLSPVAVAVSS 61
>06_03_1011 -
26882011-26882157,26882576-26884248,26884607-26884783,
26885313-26885416,26885896-26886032
Length = 745
Score = 28.7 bits (61), Expect = 4.9
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = +3
Query: 354 ELKKLLNKDVTFLNDCIGPEVETACANPSAGSIILLENLRF 476
EL+K+LN+D++ L +G +T G I+L+ +LR+
Sbjct: 92 ELEKMLNQDLSRLYPELGNFFQTTICQSMLGRILLVWSLRY 132
>06_01_0182 +
1413551-1413794,1413883-1414139,1414241-1414387,
1414487-1414804
Length = 321
Score = 28.7 bits (61), Expect = 4.9
Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +3
Query: 432 NPSAGSIILLENLRF-HIEEEGKGVDASGAKVKADPEKVKAFRASLRKLGDVYIND 596
+P A + L+E R H+E+ K V A A+V KV A AS+RK V ND
Sbjct: 130 DPEARARRLIEERRNGHLEKAAKAVAAVTAEVDKLAPKVAALDASVRKGEKVAEND 185
>05_06_0193 +
26279105-26279229,26279725-26279833,26280362-26280437,
26280527-26281472,26281564-26281615,26281945-26282067,
26282144-26282219,26282308-26282492,26282615-26282806,
26282895-26282963,26283745-26283954,26285602-26285751,
26286283-26286344,26286428-26286503,26286575-26286745
Length = 873
Score = 28.3 bits (60), Expect = 6.4
Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 2/80 (2%)
Frame = +3
Query: 351 EELKKLLNKDVTFLNDCI--GPEVETACANPSAGSIILLENLRFHIEEEGKGVDASGAKV 524
+E LL D+ FL + E E + +L +LR E E + +DA +
Sbjct: 172 KEENMLLKDDIQFLKTMLIEVAETENSIFTLEKERALLDASLR---ELESRFIDAQADML 228
Query: 525 KADPEKVKAFRASLRKLGDV 584
K+DP + A+ + LGD+
Sbjct: 229 KSDPRQYDAWWEKVENLGDL 248
>12_02_0726 -
22552005-22552035,22552507-22552598,22552970-22553094,
22553221-22553311,22553475-22553755,22554211-22554394,
22554499-22554583,22554692-22554782,22554909-22555293,
22555457-22555669,22555873-22556418,22556572-22556788,
22556907-22557058,22557519-22557663,22557846-22557907,
22559130-22559291,22559393-22559482,22560055-22560215,
22560907-22560997,22561125-22561308,22561556-22561737,
22561857-22562086,22562622-22562685
Length = 1287
Score = 27.9 bits (59), Expect = 8.5
Identities = 19/70 (27%), Positives = 32/70 (45%)
Frame = +3
Query: 195 KEGVITNNQRIVAALDSVKYALDKGAKSVVLMSHLGRPDGQVNLKYTLKPVAEELKKLLN 374
+ GV+ + + +AAL D AKS + L +G L + P E +K+LN
Sbjct: 601 RHGVVLDGE--IAALFFKHENYDLAAKSYEKVCALYSAEGWEELLADVLPDLAECQKILN 658
Query: 375 KDVTFLNDCI 404
+ +L C+
Sbjct: 659 DEAGYLTSCV 668
>11_08_0024 + 27747449-27747940,27748141-27750177
Length = 842
Score = 27.9 bits (59), Expect = 8.5
Identities = 18/79 (22%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Frame = +3
Query: 186 VPLKEGVITNNQRIVAALDSVKYALDKGAKSVVLMSHLGRPDGQVNLKYTLKPVAEELKK 365
+P GV+ N QR+ + ++ G ++ + +L D Q L T+ P L +
Sbjct: 465 IPSNIGVLKNIQRLFLGTNQFSSSISMGISNMTKLEYLDLSDNQ--LASTVPPSLFHLDR 522
Query: 366 LLNKDVT--FLNDCIGPEV 416
L+ D++ FL+ + ++
Sbjct: 523 LVKLDLSHNFLSGALPADI 541
>11_01_0302 +
2261489-2261738,2261917-2262064,2262124-2262205,
2262501-2262566,2262609-2262686,2262794-2262808,
2263618-2263764
Length = 261
Score = 27.9 bits (59), Expect = 8.5
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -3
Query: 619 ALCAVPKASLI*TSPSFLKLALKALTFSGSAFTLAPEASTPLPSS 485
A+C + K S FL L+LKA+ SG + A PL S
Sbjct: 128 AICLIGKELRARVSDIFLNLSLKAIDISGVSMVTTFLAEVPLAKS 172
>04_03_0359 -
14864750-14864998,14865122-14865345,14867358-14867475,
14867586-14867960,14869257-14869673
Length = 460
Score = 27.9 bits (59), Expect = 8.5
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = -3
Query: 190 GTLKSTRIRTLLPVKLSASI 131
G L S R+R LLP+KLSA++
Sbjct: 160 GHLVSKRVRDLLPIKLSANL 179
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,123,982
Number of Sequences: 37544
Number of extensions: 323827
Number of successful extensions: 953
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 907
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 939
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1862792824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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