Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc7d07
(717 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U88169-9|AAB42230.1| 417|Caenorhabditis elegans Phosphoglycerat... 315 2e-86
Z81568-8|CAD89739.1| 496|Caenorhabditis elegans Hypothetical pr... 33 0.20
Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical p... 29 4.4
Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical p... 29 4.4
Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical p... 29 4.4
Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z66511-7|CAD57693.1| 567|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z66513-15|CAA91337.3| 487|Caenorhabditis elegans Hypothetical p... 28 5.8
U64603-4|AAO61442.1| 410|Caenorhabditis elegans Serotonin/octop... 28 5.8
U64603-3|AAM15552.1| 422|Caenorhabditis elegans Serotonin/octop... 28 5.8
U64603-2|AAB04582.3| 435|Caenorhabditis elegans Serotonin/octop... 28 5.8
AL110499-6|CAB57915.2| 487|Caenorhabditis elegans Hypothetical ... 28 5.8
>U88169-9|AAB42230.1| 417|Caenorhabditis elegans Phosphoglycerate
kinase protein 1 protein.
Length = 417
Score = 315 bits (773), Expect = 2e-86
Identities = 151/201 (75%), Positives = 171/201 (85%)
Frame = +3
Query: 114 ALNKLSIDALNLTGKRVLMRVDFNVPLKEGVITNNQRIVAALDSVKYALDKGAKSVVLMS 293
+LNKL+ID LNL GKRVL+RVDFNVPLK+G ITNNQRI AA+ ++++AL GAKSVVLMS
Sbjct: 3 SLNKLAIDQLNLAGKRVLIRVDFNVPLKDGKITNNQRIAAAVPTIQHALSNGAKSVVLMS 62
Query: 294 HLGRPDGQVNLKYTLKPVAEELKKLLNKDVTFLNDCIGPEVETACANPSAGSIILLENLR 473
HLGRPDG+ KYTLKPVAEELK LL KDV FL+DC+G EVE ACA+P+ GS+ILLENLR
Sbjct: 63 HLGRPDGRRQDKYTLKPVAEELKALLKKDVLFLDDCVGSEVEAACADPAPGSVILLENLR 122
Query: 474 FHIEEEGKGVDASGAKVKADPEKVKAFRASLRKLGDVYINDAFGTAHRAHSSMVGEGFEQ 653
+H+EEEGKGVDASGAKVKAD VK FR SL KLGD+Y+NDAFGTAHRAHSSMVG Q
Sbjct: 123 YHLEEEGKGVDASGAKVKADSAAVKKFRESLTKLGDIYVNDAFGTAHRAHSSMVGVEHSQ 182
Query: 654 RASGFLLKKELQYFAKALHEP 716
RASGFLLK EL YF+KAL P
Sbjct: 183 RASGFLLKNELSYFSKALDNP 203
>Z81568-8|CAD89739.1| 496|Caenorhabditis elegans Hypothetical
protein K08E3.5e protein.
Length = 496
Score = 33.1 bits (72), Expect = 0.20
Identities = 31/100 (31%), Positives = 39/100 (39%), Gaps = 1/100 (1%)
Frame = -3
Query: 502 TPLPSSSMWKRRFSSRIIEPAEG-LAHAVSTSGPMQSFKNVTSLFSNFFSSSATGLRVYL 326
TP PSS WK + EG LAH +ST P N T L S F + A LR
Sbjct: 2 TPFPSSEEWKTSTKLEALGSMEGELAHLLSTCKPETLNHNKTEL-SGFRNLFARFLRAKP 60
Query: 325 RFTWPSGLPKCDISTTDLAPLSKAYLTESKAATMRWLFVI 206
W P + + L E A+ +R L V+
Sbjct: 61 TVDWSKIEPLPEGAIRPYKSLGHVVDKELIASQLRKLVVV 100
>Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical protein
F07A11.6e protein.
Length = 2101
Score = 28.7 bits (61), Expect = 4.4
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +3
Query: 366 LLNKDVTFLNDCIGPEVETACANPSAGSIILLENLR 473
L+N TFLND +G +V NP S+ +L+ LR
Sbjct: 1935 LINGSETFLNDVLGRQVTE--ENPRRDSVKILQRLR 1968
>Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical protein
F07A11.6c protein.
Length = 2392
Score = 28.7 bits (61), Expect = 4.4
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +3
Query: 366 LLNKDVTFLNDCIGPEVETACANPSAGSIILLENLR 473
L+N TFLND +G +V NP S+ +L+ LR
Sbjct: 2226 LINGSETFLNDVLGRQVTE--ENPRRDSVKILQRLR 2259
>Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical protein
F07A11.6b protein.
Length = 2407
Score = 28.7 bits (61), Expect = 4.4
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +3
Query: 366 LLNKDVTFLNDCIGPEVETACANPSAGSIILLENLR 473
L+N TFLND +G +V NP S+ +L+ LR
Sbjct: 2241 LINGSETFLNDVLGRQVTE--ENPRRDSVKILQRLR 2274
>Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical protein
F07A11.6a protein.
Length = 2211
Score = 28.7 bits (61), Expect = 4.4
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +3
Query: 366 LLNKDVTFLNDCIGPEVETACANPSAGSIILLENLR 473
L+N TFLND +G +V NP S+ +L+ LR
Sbjct: 2045 LINGSETFLNDVLGRQVTE--ENPRRDSVKILQRLR 2078
>Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical
protein F07A11.6e protein.
Length = 2101
Score = 28.7 bits (61), Expect = 4.4
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +3
Query: 366 LLNKDVTFLNDCIGPEVETACANPSAGSIILLENLR 473
L+N TFLND +G +V NP S+ +L+ LR
Sbjct: 1935 LINGSETFLNDVLGRQVTE--ENPRRDSVKILQRLR 1968
>Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical
protein F07A11.6c protein.
Length = 2392
Score = 28.7 bits (61), Expect = 4.4
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +3
Query: 366 LLNKDVTFLNDCIGPEVETACANPSAGSIILLENLR 473
L+N TFLND +G +V NP S+ +L+ LR
Sbjct: 2226 LINGSETFLNDVLGRQVTE--ENPRRDSVKILQRLR 2259
>Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical
protein F07A11.6b protein.
Length = 2407
Score = 28.7 bits (61), Expect = 4.4
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +3
Query: 366 LLNKDVTFLNDCIGPEVETACANPSAGSIILLENLR 473
L+N TFLND +G +V NP S+ +L+ LR
Sbjct: 2241 LINGSETFLNDVLGRQVTE--ENPRRDSVKILQRLR 2274
>Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical protein
F07A11.6a protein.
Length = 2211
Score = 28.7 bits (61), Expect = 4.4
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +3
Query: 366 LLNKDVTFLNDCIGPEVETACANPSAGSIILLENLR 473
L+N TFLND +G +V NP S+ +L+ LR
Sbjct: 2045 LINGSETFLNDVLGRQVTE--ENPRRDSVKILQRLR 2078
>Z66511-7|CAD57693.1| 567|Caenorhabditis elegans Hypothetical
protein F07A11.6d protein.
Length = 567
Score = 28.7 bits (61), Expect = 4.4
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +3
Query: 366 LLNKDVTFLNDCIGPEVETACANPSAGSIILLENLR 473
L+N TFLND +G +V NP S+ +L+ LR
Sbjct: 401 LINGSETFLNDVLGRQVTE--ENPRRDSVKILQRLR 434
>Z66513-15|CAA91337.3| 487|Caenorhabditis elegans Hypothetical
protein F54D5.12 protein.
Length = 487
Score = 28.3 bits (60), Expect = 5.8
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = +3
Query: 270 AKSVVLMSHLGRPDGQVNLKYTLKPVAEELKKLL 371
AK +V HLG DG +L T + EEL+KLL
Sbjct: 396 AKRIVTYGHLG--DGNTHLNITSEKHNEELEKLL 427
>U64603-4|AAO61442.1| 410|Caenorhabditis elegans
Serotonin/octopamine receptor familyprotein 7, isoform c
protein.
Length = 410
Score = 28.3 bits (60), Expect = 5.8
Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 3/78 (3%)
Frame = -3
Query: 316 WPSGLPKCDISTTDLAPLSKAYLTESKAATMRWLFVITPSLSGTLKSTRIRTLLPVK--- 146
WP G C + TT L A + A ++ VI+ L + K T R ++ +
Sbjct: 107 WPLGSTMCSVYTTSDLTLCTASIVNLCAISVDRYLVISSPLRYSAKRTTKRIMMYIACVW 166
Query: 145 LSASILNLFKAILSRKLN 92
+ A+I+++ I++ LN
Sbjct: 167 IIAAIVSISSHIIANLLN 184
>U64603-3|AAM15552.1| 422|Caenorhabditis elegans
Serotonin/octopamine receptor familyprotein 7, isoform b
protein.
Length = 422
Score = 28.3 bits (60), Expect = 5.8
Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 3/78 (3%)
Frame = -3
Query: 316 WPSGLPKCDISTTDLAPLSKAYLTESKAATMRWLFVITPSLSGTLKSTRIRTLLPVK--- 146
WP G C + TT L A + A ++ VI+ L + K T R ++ +
Sbjct: 107 WPLGSTMCSVYTTSDLTLCTASIVNLCAISVDRYLVISSPLRYSAKRTTKRIMMYIACVW 166
Query: 145 LSASILNLFKAILSRKLN 92
+ A+I+++ I++ LN
Sbjct: 167 IIAAIVSISSHIIANLLN 184
>U64603-2|AAB04582.3| 435|Caenorhabditis elegans
Serotonin/octopamine receptor familyprotein 7, isoform a
protein.
Length = 435
Score = 28.3 bits (60), Expect = 5.8
Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 3/78 (3%)
Frame = -3
Query: 316 WPSGLPKCDISTTDLAPLSKAYLTESKAATMRWLFVITPSLSGTLKSTRIRTLLPVK--- 146
WP G C + TT L A + A ++ VI+ L + K T R ++ +
Sbjct: 107 WPLGSTMCSVYTTSDLTLCTASIVNLCAISVDRYLVISSPLRYSAKRTTKRIMMYIACVW 166
Query: 145 LSASILNLFKAILSRKLN 92
+ A+I+++ I++ LN
Sbjct: 167 IIAAIVSISSHIIANLLN 184
>AL110499-6|CAB57915.2| 487|Caenorhabditis elegans Hypothetical
protein F54D5.12 protein.
Length = 487
Score = 28.3 bits (60), Expect = 5.8
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = +3
Query: 270 AKSVVLMSHLGRPDGQVNLKYTLKPVAEELKKLL 371
AK +V HLG DG +L T + EEL+KLL
Sbjct: 396 AKRIVTYGHLG--DGNTHLNITSEKHNEELEKLL 427
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,133,721
Number of Sequences: 27780
Number of extensions: 296489
Number of successful extensions: 820
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 803
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 819
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1676746902
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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