Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc7d06
         (628 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI000023C9B6 Cluster: hypothetical protein FG00211.1; ...    38   0.15 
UniRef50_Q4SKZ5 Cluster: Chromosome 17 SCAF14563, whole genome s...    35   1.8  
UniRef50_UPI000065E81A Cluster: Homolog of Homo sapiens "Splice ...    34   3.2  
UniRef50_Q0URD4 Cluster: Predicted protein; n=1; Phaeosphaeria n...    33   7.4  
UniRef50_A6DGX6 Cluster: Probable serine/threonine-protein kinas...    32   9.8  

>UniRef50_UPI000023C9B6 Cluster: hypothetical protein FG00211.1;
           n=1; Gibberella zeae PH-1|Rep: hypothetical protein
           FG00211.1 - Gibberella zeae PH-1
          Length = 285

 Score = 38.3 bits (85), Expect = 0.15
 Identities = 31/99 (31%), Positives = 47/99 (47%), Gaps = 5/99 (5%)
 Frame = +3

Query: 192 GQFCVIYFFLLTTSLLV--DNIRIGIKPRAFEI*RDVDLENTSVIILIDAVMTARILDLG 365
           G+ C +     TT L V  D I   I+     +  +  L N   II+I  ++   IL L 
Sbjct: 110 GEDCSLISVRKTTRLFVIGDFITFNIQGNGGGLLANEKLANAGKIIVIVGLIAQIILFLA 169

Query: 366 --VCCN-YHRRYRAVCRKSKTPTPQDVSWHSSVEPLFRT 473
             VCC  +HRR+R   R+S TP   ++ W + +  L+ T
Sbjct: 170 FVVCCVVFHRRFRVHLRQSHTPV--EIRWEAYLNMLYMT 206


>UniRef50_Q4SKZ5 Cluster: Chromosome 17 SCAF14563, whole genome
           shotgun sequence; n=5; Tetraodontidae|Rep: Chromosome 17
           SCAF14563, whole genome shotgun sequence - Tetraodon
           nigroviridis (Green puffer)
          Length = 760

 Score = 34.7 bits (76), Expect = 1.8
 Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
 Frame = -1

Query: 574 ITARGVRYKSATAYCD*TVPVK-WSLISRSHEYNYVLNNGSTELCQETSCGVGVLL 410
           +T RG+R K     C      K WSL     +Y++V NN ST++    S  +GV L
Sbjct: 391 VTYRGIRRKGNANECSLGWNDKSWSLYCSDSKYSFVHNNKSTDIAGPVSSRIGVYL 446


>UniRef50_UPI000065E81A Cluster: Homolog of Homo sapiens "Splice
           Isoform 1 of Tripartite motif protein 16; n=1; Takifugu
           rubripes|Rep: Homolog of Homo sapiens "Splice Isoform 1
           of Tripartite motif protein 16 - Takifugu rubripes
          Length = 446

 Score = 33.9 bits (74), Expect = 3.2
 Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
 Frame = -1

Query: 574 ITARGVRYKSATAYCD*TVPVK-WSLISRSHEYNYVLNNGSTELCQETSCGVGVLL 410
           +T RG+R K     C      K WSL     +Y++V NN ST++    S  +GV L
Sbjct: 360 VTYRGIRRKGNGNECSLGWNDKSWSLYCSDSKYSFVHNNKSTDIAGPVSSRIGVYL 415


>UniRef50_Q0URD4 Cluster: Predicted protein; n=1; Phaeosphaeria
           nodorum|Rep: Predicted protein - Phaeosphaeria nodorum
           (Septoria nodorum)
          Length = 246

 Score = 32.7 bits (71), Expect = 7.4
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = +1

Query: 484 REIVRLMTTLPVPSNRNTLSHSCTERHAQLFLP 582
           R  V L   LPVP + NT +H C  RH   + P
Sbjct: 81  RRRVHLPLALPVPQSSNTTAHPCCARHTPNWFP 113


>UniRef50_A6DGX6 Cluster: Probable serine/threonine-protein kinase
           pknB; n=1; Lentisphaera araneosa HTCC2155|Rep: Probable
           serine/threonine-protein kinase pknB - Lentisphaera
           araneosa HTCC2155
          Length = 669

 Score = 32.3 bits (70), Expect = 9.8
 Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
 Frame = -1

Query: 352 IRAVMTASMRMITLVFSRSTSRHISKARGFIPILILSTRSEVVNKKK*ITQ--NWPNYIS 179
           +  V T  M+ IT VF +STSRH++ A   +P +  S  +E+  K+  +T     PN IS
Sbjct: 40  VETVATGGMKKITKVFDQSTSRHVAMAE-LLPDIDTSF-NELFLKEARLTAMLEHPNIIS 97

Query: 178 LN 173
           ++
Sbjct: 98  IH 99


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 589,995,415
Number of Sequences: 1657284
Number of extensions: 10801292
Number of successful extensions: 24142
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 23392
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24136
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 46051731393
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)