Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc7d06
         (628 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform ...    24   3.4  
AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform ...    24   3.4  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    23   6.0  
DQ013849-1|AAY40258.1|  264|Anopheles gambiae CYP325C2 protein.        23   6.0  

>AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform B
           protein.
          Length = 755

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +2

Query: 518 YRLIAIRCRTLVPNATRSYFCHXQ 589
           Y ++   C+   PNAT + + H Q
Sbjct: 173 YTVLGAACQVCTPNATNTVWSHCQ 196


>AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform A
           protein.
          Length = 753

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +2

Query: 518 YRLIAIRCRTLVPNATRSYFCHXQ 589
           Y ++   C+   PNAT + + H Q
Sbjct: 173 YTVLGAACQVCTPNATNTVWSHCQ 196


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 23.4 bits (48), Expect = 6.0
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +1

Query: 43  CAFASFLCVAFVCAVLVEK 99
           C+F+SF+  AFV  V V++
Sbjct: 381 CSFSSFMLQAFVVCVPVQR 399


>DQ013849-1|AAY40258.1|  264|Anopheles gambiae CYP325C2 protein.
          Length = 264

 Score = 23.4 bits (48), Expect = 6.0
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = -2

Query: 75  ERHAQKRGKGAARDRFYSFSAGSRS 1
           +R   +R +G + + F  FSAGSR+
Sbjct: 185 DRFLPERSEGRSTNVFIPFSAGSRN 209


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 627,887
Number of Sequences: 2352
Number of extensions: 12894
Number of successful extensions: 34
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61050630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)