Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc7d02
         (709 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    27   0.76 
AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containi...    25   2.3  
AY735443-1|AAU08018.1|  163|Anopheles gambiae bursicon protein.        23   7.1  
AY735442-1|AAU08017.1|  163|Anopheles gambiae bursicon protein.        23   7.1  

>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 26.6 bits (56), Expect = 0.76
 Identities = 40/135 (29%), Positives = 60/135 (44%), Gaps = 3/135 (2%)
 Frame = +3

Query: 75  LKQDAAYQ-KLQEYYNVNNTKINMLQL-FQQDRERFEKFSLCIPTPNDGDILLDYSKNRI 248
           +K   ++Q KLQ+    +  K   L+   Q+  E FE+  + I   N     L   K+  
Sbjct: 406 IKDKISHQNKLQDDLKKDIAKQGELEKKIQEHTESFEQLRVQIDEHNKNFYELKKKKDHY 465

Query: 249 NSDVFKLLLDLAKSRNVEQARDAMFSGQKINFTEDRAVLHIALRNRQNKPILVNGKD-VS 425
            S    L  D+ K    E A     SG K    E+ A    ALR+   KPIL NG+D V 
Sbjct: 466 QS----LRNDIWKK---ETAVTQTLSGYK----EELARADQALRSMAGKPIL-NGRDSVR 513

Query: 426 TDVNAVLEHMKEFSD 470
             + + L+  +E++D
Sbjct: 514 KVLESFLQRGREYAD 528



 Score = 24.2 bits (50), Expect = 4.1
 Identities = 10/35 (28%), Positives = 16/35 (45%)
 Frame = +3

Query: 42  QSIVTMEPKINLKQDAAYQKLQEYYNVNNTKINML 146
           + +V     +NL + A +     YY V   KIN +
Sbjct: 113 KKVVPRSEVVNLLESAGFSNSNPYYIVKQGKINQM 147


>AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containing
            protein I protein.
          Length = 1340

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 17/67 (25%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
 Frame = +3

Query: 93   YQKLQEYYNVNNTKINMLQLFQQDRERFEKFSLCIPTPNDG--DILLDYSKNRINSDVFK 266
            Y+K  +Y+N+N+ +I+ +Q F +  E  +K  + +     G  +++  +  N +N +  +
Sbjct: 1139 YKKNTKYFNINSEQID-VQNFLEIPEDTKKLEINVGGIGFGLLEVIYQFDLNLVNFE-HR 1196

Query: 267  LLLDLAK 287
              LDL K
Sbjct: 1197 FKLDLEK 1203



 Score = 23.4 bits (48), Expect = 7.1
 Identities = 11/35 (31%), Positives = 23/35 (65%)
 Frame = +3

Query: 66   KINLKQDAAYQKLQEYYNVNNTKINMLQLFQQDRE 170
            K+ LK+ A Y  + +YYN N   +N +++++ D++
Sbjct: 1293 KVALKRPA-YVVVYDYYNTN---LNAIKVYEVDKQ 1323


>AY735443-1|AAU08018.1|  163|Anopheles gambiae bursicon protein.
          Length = 163

 Score = 23.4 bits (48), Expect = 7.1
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -3

Query: 536 TNVDHICYSLSCIPLPLPAHYLIG 465
           T V H+     C+P P+P+   IG
Sbjct: 42  TPVIHVLQYPGCVPKPIPSFACIG 65


>AY735442-1|AAU08017.1|  163|Anopheles gambiae bursicon protein.
          Length = 163

 Score = 23.4 bits (48), Expect = 7.1
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -3

Query: 536 TNVDHICYSLSCIPLPLPAHYLIG 465
           T V H+     C+P P+P+   IG
Sbjct: 42  TPVIHVLQYPGCVPKPIPSFACIG 65


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 710,751
Number of Sequences: 2352
Number of extensions: 13730
Number of successful extensions: 30
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72340815
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)