Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc7d02
(709 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110500-9|CAE54920.1| 586|Caenorhabditis elegans Hypothetical ... 290 7e-79
AL110500-8|CAB60430.1| 551|Caenorhabditis elegans Hypothetical ... 289 2e-78
Z83125-8|CAB05623.1| 507|Caenorhabditis elegans Hypothetical pr... 33 0.26
L23646-2|AAK67235.1| 304|Caenorhabditis elegans Hypothetical pr... 33 0.26
AL110485-23|CAB60377.3| 770|Caenorhabditis elegans Hypothetical... 30 1.9
Z81527-12|CAB04277.2| 487|Caenorhabditis elegans Hypothetical p... 29 2.5
Z50740-2|CAA90608.1| 383|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z81095-1|CAB03158.1| 667|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z70286-4|CAA94291.2| 533|Caenorhabditis elegans Hypothetical pr... 29 4.3
AJ582070-1|CAE46540.1| 533|Caenorhabditis elegans flavin monoox... 29 4.3
Z92803-8|CAB07245.1| 814|Caenorhabditis elegans Hypothetical pr... 28 5.7
U94835-1|AAC47510.1| 814|Caenorhabditis elegans multiple exosto... 28 5.7
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 28 5.7
AB077851-1|BAB83878.1| 814|Caenorhabditis elegans heparan sulfa... 28 5.7
AF068716-3|ABQ13069.1| 208|Caenorhabditis elegans Hypothetical ... 28 7.5
AF025459-4|AAB70984.2| 292|Caenorhabditis elegans Hypothetical ... 27 9.9
AF016670-5|AAB66104.1| 1193|Caenorhabditis elegans Hypothetical ... 27 9.9
AC024791-10|ABM74563.1| 1736|Caenorhabditis elegans Hypothetical... 27 9.9
>AL110500-9|CAE54920.1| 586|Caenorhabditis elegans Hypothetical
protein Y87G2A.8b protein.
Length = 586
Score = 290 bits (711), Expect = 7e-79
Identities = 138/216 (63%), Positives = 169/216 (78%)
Frame = +3
Query: 60 EPKINLKQDAAYQKLQEYYNVNNTKINMLQLFQQDRERFEKFSLCIPTPNDGDILLDYSK 239
E ++L QDA + +L+ + N +L+LF++D RFEKF+ TP DGD L D+SK
Sbjct: 33 EKAMSLSQDATFVELKRHVEANEKDAQLLELFEKDPARFEKFTRLFATP-DGDFLFDFSK 91
Query: 240 NRINSDVFKLLLDLAKSRNVEQARDAMFSGQKINFTEDRAVLHIALRNRQNKPILVNGKD 419
NRI + F+LL+ LAKSR VE++R+AMFS +KINFTE+RAVLH+ALRNR N+PILV+GKD
Sbjct: 92 NRITDESFQLLMRLAKSRGVEESRNAMFSAEKINFTENRAVLHVALRNRANRPILVDGKD 151
Query: 420 VSTDVNAVLEHMKEFSDQVVSGQWKGYTGKAITDVINIGIGGSDLGPLMVTEALKPYANH 599
V DVN VL HMKEF ++++SG W GYTGK ITDV+NIGIGGSDLGPLMVTE+LK Y
Sbjct: 152 VMPDVNRVLAHMKEFCNEIISGSWTGYTGKKITDVVNIGIGGSDLGPLMVTESLKNYQIG 211
Query: 600 LKVHFVSNIDGTHLAEVLKKLNPETALFIIASKTFT 707
VHFVSN+DGTH+AEV KKLN ET LFIIASKTFT
Sbjct: 212 PNVHFVSNVDGTHVAEVTKKLNAETTLFIIASKTFT 247
>AL110500-8|CAB60430.1| 551|Caenorhabditis elegans Hypothetical
protein Y87G2A.8a protein.
Length = 551
Score = 289 bits (708), Expect = 2e-78
Identities = 137/213 (64%), Positives = 168/213 (78%)
Frame = +3
Query: 69 INLKQDAAYQKLQEYYNVNNTKINMLQLFQQDRERFEKFSLCIPTPNDGDILLDYSKNRI 248
++L QDA + +L+ + N +L+LF++D RFEKF+ TP DGD L D+SKNRI
Sbjct: 1 MSLSQDATFVELKRHVEANEKDAQLLELFEKDPARFEKFTRLFATP-DGDFLFDFSKNRI 59
Query: 249 NSDVFKLLLDLAKSRNVEQARDAMFSGQKINFTEDRAVLHIALRNRQNKPILVNGKDVST 428
+ F+LL+ LAKSR VE++R+AMFS +KINFTE+RAVLH+ALRNR N+PILV+GKDV
Sbjct: 60 TDESFQLLMRLAKSRGVEESRNAMFSAEKINFTENRAVLHVALRNRANRPILVDGKDVMP 119
Query: 429 DVNAVLEHMKEFSDQVVSGQWKGYTGKAITDVINIGIGGSDLGPLMVTEALKPYANHLKV 608
DVN VL HMKEF ++++SG W GYTGK ITDV+NIGIGGSDLGPLMVTE+LK Y V
Sbjct: 120 DVNRVLAHMKEFCNEIISGSWTGYTGKKITDVVNIGIGGSDLGPLMVTESLKNYQIGPNV 179
Query: 609 HFVSNIDGTHLAEVLKKLNPETALFIIASKTFT 707
HFVSN+DGTH+AEV KKLN ET LFIIASKTFT
Sbjct: 180 HFVSNVDGTHVAEVTKKLNAETTLFIIASKTFT 212
>Z83125-8|CAB05623.1| 507|Caenorhabditis elegans Hypothetical
protein T15D6.10 protein.
Length = 507
Score = 32.7 bits (71), Expect = 0.26
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -3
Query: 464 EFLHVF*YRIDISADILTVHQDRLVLTVTQSYMQYCPVFCEVY 336
E H F Y SA H+D++V+T+T M + ++C Y
Sbjct: 113 EHFHPFLYHTKPSAMSAFAHKDQIVVTLTSENMMHATMYCRYY 155
>L23646-2|AAK67235.1| 304|Caenorhabditis elegans Hypothetical
protein F44E2.10 protein.
Length = 304
Score = 32.7 bits (71), Expect = 0.26
Identities = 14/44 (31%), Positives = 28/44 (63%), Gaps = 2/44 (4%)
Frame = +3
Query: 114 YNVNNTKINMLQLFQQDRERFEKFSLCIPTPNDGD--ILLDYSK 239
Y+ NN +++ ++++Q +R E FS +P DG+ I+L +S+
Sbjct: 79 YSFNNAEVDDMEIYQTERWSKESFSYDVPISEDGEYVIILKFSE 122
>AL110485-23|CAB60377.3| 770|Caenorhabditis elegans Hypothetical
protein Y46G5A.29 protein.
Length = 770
Score = 29.9 bits (64), Expect = 1.9
Identities = 30/125 (24%), Positives = 48/125 (38%), Gaps = 7/125 (5%)
Frame = +3
Query: 15 RHSICKAPVQSIVTMEPKI---NLKQDAAYQKLQEYYNVNNTKINMLQLFQQDRERFEKF 185
RH+ K P Q T P I NL++D + ++ + LF++ RE K
Sbjct: 185 RHAFLKGPYQKYSTQNPNIFIYNLEKDIEQRTSEKVVTSEPVLPSQHPLFEEQRE-ILKA 243
Query: 186 SLCIPTPNDGDILLDYSKNRINSDVFKL----LLDLAKSRNVEQARDAMFSGQKINFTED 353
+ P P L + S+N + DVF A + ++ +M G K T
Sbjct: 244 KMVTPLPVTVASLAETSEN--SDDVFDFDGLTFESPATANKIQVTAASMMMGDKAGSTRA 301
Query: 354 RAVLH 368
+ H
Sbjct: 302 PEISH 306
>Z81527-12|CAB04277.2| 487|Caenorhabditis elegans Hypothetical
protein F35E12.10 protein.
Length = 487
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -2
Query: 183 TFRNAPDLVGKVGAY*FLCCLHCNILVISDM 91
T+ N DL G VG Y FL CL CN +++
Sbjct: 261 TYGNMGDLSGNVGGYTFL-CLDCNQFYFTEL 290
>Z50740-2|CAA90608.1| 383|Caenorhabditis elegans Hypothetical
protein F31B12.3 protein.
Length = 383
Score = 29.5 bits (63), Expect = 2.5
Identities = 17/59 (28%), Positives = 33/59 (55%)
Frame = +3
Query: 309 RDAMFSGQKINFTEDRAVLHIALRNRQNKPILVNGKDVSTDVNAVLEHMKEFSDQVVSG 485
R+ MFS IN+ D+ + ++ + K I++ + T++N + + +F DQV+SG
Sbjct: 113 RNVMFS---INYLIDQKLFDKVVKPKTGKNIVIYKVKLLTNLNLSNKILFQFQDQVISG 168
>Z81095-1|CAB03158.1| 667|Caenorhabditis elegans Hypothetical
protein F59F4.1 protein.
Length = 667
Score = 28.7 bits (61), Expect = 4.3
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = +3
Query: 531 IGIGGSDLGPLMVTEALKPYANHLKVHFVSNIDGTHLAEVLKKLNPETALFI 686
+GI G+D G L+ + P L + N DGT++A KL T +F+
Sbjct: 240 LGINGNDNGFLLFDKVRIPRKALLMRYAKVNPDGTYIAPAHSKLGYGTMVFV 291
>Z70286-4|CAA94291.2| 533|Caenorhabditis elegans Hypothetical
protein K08C7.2 protein.
Length = 533
Score = 28.7 bits (61), Expect = 4.3
Identities = 26/111 (23%), Positives = 55/111 (49%), Gaps = 2/111 (1%)
Frame = +3
Query: 222 LLDYSKNRINSDVFKLLLDLAKSRNVEQARDAMFSGQ-KINFTEDRAVLHIALRNRQNKP 398
LL+YSK+ ++ K + K ++++ D +G+ K+N+T+D+ H A+ +
Sbjct: 93 LLNYSKHY---ELEKHIKFNHKVNSIDRNEDYEKTGKWKVNYTDDKGATHDAV---FDGV 146
Query: 399 ILVNGKDVSTDVNAVLEHMKEFSDQVV-SGQWKGYTGKAITDVINIGIGGS 548
+L +G + + +F +++ S +K + G V+ +GIG S
Sbjct: 147 MLCSGHHTTPNWPQKFRGQDDFKGRIIHSHSYKDHRGYEDKVVVVVGIGNS 197
>AJ582070-1|CAE46540.1| 533|Caenorhabditis elegans flavin
monooxygenase protein.
Length = 533
Score = 28.7 bits (61), Expect = 4.3
Identities = 26/111 (23%), Positives = 55/111 (49%), Gaps = 2/111 (1%)
Frame = +3
Query: 222 LLDYSKNRINSDVFKLLLDLAKSRNVEQARDAMFSGQ-KINFTEDRAVLHIALRNRQNKP 398
LL+YSK+ ++ K + K ++++ D +G+ K+N+T+D+ H A+ +
Sbjct: 93 LLNYSKHY---ELEKHIKFNHKVNSIDRNEDYEKTGKWKVNYTDDKGATHDAV---FDGV 146
Query: 399 ILVNGKDVSTDVNAVLEHMKEFSDQVV-SGQWKGYTGKAITDVINIGIGGS 548
+L +G + + +F +++ S +K + G V+ +GIG S
Sbjct: 147 MLCSGHHTTPNWPQKFRGQDDFKGRIIHSHSYKDHRGYEDKVVVVVGIGNS 197
>Z92803-8|CAB07245.1| 814|Caenorhabditis elegans Hypothetical
protein K01G5.6 protein.
Length = 814
Score = 28.3 bits (60), Expect = 5.7
Identities = 38/164 (23%), Positives = 72/164 (43%), Gaps = 3/164 (1%)
Frame = +3
Query: 84 DAAYQKLQEYYNVNNTKINM-LQLFQQDRERFEKFSLCIPTPNDGDILLDYSKNRINSDV 260
+AA ++L+E N K+ + Q RE + + +PN D ++DYS+ I+S
Sbjct: 123 EAAQRQLEELRETQNVKVFLPFSPLQIPRELEQPSQI---SPNQLDDIIDYSRCSISS-F 178
Query: 261 FKLLLDLAKSRNVEQARDAMFSGQKINFTE--DRAVLHIALRNRQNKPILVNGKDVSTDV 434
+ +D+ S E+ +F N E D+A + I + N P + +V
Sbjct: 179 MPVYVDIITSGQSEKEWLNVFQEVIPNLVETPDKACIKIHISNGIASP-NTTFNSILFNV 237
Query: 435 NAVLEHMKEFSDQVVSGQWKGYTGKAITDVINIGIGGSDLGPLM 566
+ + + + S V + + + + DV +I + DL PL+
Sbjct: 238 GSPIINFQSKSIHVQASKIRSFDFP--VDVNHIAVEKVDLTPLL 279
>U94835-1|AAC47510.1| 814|Caenorhabditis elegans multiple exostoses
homolog 2 protein.
Length = 814
Score = 28.3 bits (60), Expect = 5.7
Identities = 38/164 (23%), Positives = 72/164 (43%), Gaps = 3/164 (1%)
Frame = +3
Query: 84 DAAYQKLQEYYNVNNTKINM-LQLFQQDRERFEKFSLCIPTPNDGDILLDYSKNRINSDV 260
+AA ++L+E N K+ + Q RE + + +PN D ++DYS+ I+S
Sbjct: 123 EAAQRQLEELRETQNVKVFLPFSPLQIPRELEQPSQI---SPNQLDDIIDYSRCSISS-F 178
Query: 261 FKLLLDLAKSRNVEQARDAMFSGQKINFTE--DRAVLHIALRNRQNKPILVNGKDVSTDV 434
+ +D+ S E+ +F N E D+A + I + N P + +V
Sbjct: 179 MPVYVDIITSGQSEKEWLNVFQEVIPNLVETPDKACIKIHISNGIASP-NTTFNSILFNV 237
Query: 435 NAVLEHMKEFSDQVVSGQWKGYTGKAITDVINIGIGGSDLGPLM 566
+ + + + S V + + + + DV +I + DL PL+
Sbjct: 238 GSPIINFQSKSIHVQASKIRSFDFP--VDVNHIAVEKVDLTPLL 279
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 28.3 bits (60), Expect = 5.7
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +1
Query: 253 VMFLSCSSISLRAEMLNKPEMPCSQV 330
V F SC+S+ E+LN ++PC +
Sbjct: 319 VFFSSCNSVKFHHELLNYIDIPCMSI 344
>AB077851-1|BAB83878.1| 814|Caenorhabditis elegans heparan sulfate
GlcNAc transferase-I/II protein.
Length = 814
Score = 28.3 bits (60), Expect = 5.7
Identities = 38/164 (23%), Positives = 72/164 (43%), Gaps = 3/164 (1%)
Frame = +3
Query: 84 DAAYQKLQEYYNVNNTKINM-LQLFQQDRERFEKFSLCIPTPNDGDILLDYSKNRINSDV 260
+AA ++L+E N K+ + Q RE + + +PN D ++DYS+ I+S
Sbjct: 123 EAAQRQLEELRETQNVKVFLPFSPLQIPRELEQPSQI---SPNQLDDIIDYSRCSISS-F 178
Query: 261 FKLLLDLAKSRNVEQARDAMFSGQKINFTE--DRAVLHIALRNRQNKPILVNGKDVSTDV 434
+ +D+ S E+ +F N E D+A + I + N P + +V
Sbjct: 179 MPVYVDIITSGQSEKEWLNVFQEVIPNLVETPDKACIKIHISNGIASP-NTTFNSILFNV 237
Query: 435 NAVLEHMKEFSDQVVSGQWKGYTGKAITDVINIGIGGSDLGPLM 566
+ + + + S V + + + + DV +I + DL PL+
Sbjct: 238 GSPIINFQSKSIHVQASKIRSFDFP--VDVNHIAVEKVDLTPLL 279
>AF068716-3|ABQ13069.1| 208|Caenorhabditis elegans Hypothetical
protein F26D11.13 protein.
Length = 208
Score = 27.9 bits (59), Expect = 7.5
Identities = 17/78 (21%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Frame = +3
Query: 267 LLLDLAKSRNVEQARDAMFSGQKINF-TEDRAVLHIALRNRQNKPILVNGKDVSTDVNAV 443
L +D K +E ++ + + + + T+D+ +LH + ++R + L++ K ++ + V
Sbjct: 8 LEIDREKEETIEIQKNLVLNNMILKYKTDDQIILHSSEKDRAQRQCLLDVKSLTENGMKV 67
Query: 444 LEHMKEFSDQVVSGQWKG 497
+ + + D SG KG
Sbjct: 68 INSIGKLRD-AASGIRKG 84
>AF025459-4|AAB70984.2| 292|Caenorhabditis elegans Hypothetical
protein H14A12.3 protein.
Length = 292
Score = 27.5 bits (58), Expect = 9.9
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +3
Query: 381 NRQNKPILVNGKDVSTDVNAVLEHMK 458
N+ N+ + + KDV T + + LEH+K
Sbjct: 31 NKTNENLWIQRKDVDTTLRSALEHLK 56
>AF016670-5|AAB66104.1| 1193|Caenorhabditis elegans Hypothetical
protein K02F6.4 protein.
Length = 1193
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +3
Query: 513 ITDVINIGIGGSDLGPLMVTEALKPYANHLKV 608
+TD I G D+ ++T +LKP + HL +
Sbjct: 133 LTDAIGKVTGSFDISTSLITTSLKPVSEHLNL 164
>AC024791-10|ABM74563.1| 1736|Caenorhabditis elegans Hypothetical
protein Y47G6A.17 protein.
Length = 1736
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +3
Query: 402 LVNGKDVSTDVNAVLEHMKEFSDQVVSGQWK 494
+V D DV+ +E KEF D+ V +W+
Sbjct: 1227 IVKNDDEQDDVSERIERFKEFLDEEVQTEWE 1257
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,371,089
Number of Sequences: 27780
Number of extensions: 318997
Number of successful extensions: 945
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 883
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 943
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1645110168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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